Screening of DUB activity and specificity by MALDI-TOF mass spectrometry.
Nat Commun
; 5: 4763, 2014 Aug 27.
Article
in En
| MEDLINE
| ID: mdl-25159004
ABSTRACT
Deubiquitylases (DUBs) are key regulators of the ubiquitin system which cleave ubiquitin moieties from proteins and polyubiquitin chains. Several DUBs have been implicated in various diseases and are attractive drug targets. We have developed a sensitive and fast assay to quantify in vitro DUB enzyme activity using matrix-assisted laser desorption/ionization time-of-flight (MALDI-TOF) mass spectrometry. Unlike other current assays, this method uses unmodified substrates, such as diubiquitin topoisomers. By analysing 42 human DUBs against all diubiquitin topoisomers we provide an extensive characterization of DUB activity and specificity. Our results confirm the high specificity of many members of the OTU and JAB/MPN/Mov34 metalloenzyme DUB families and highlight that all USPs tested display low linkage selectivity. We also demonstrate that this assay can be deployed to assess the potency and specificity of DUB inhibitors by profiling 11 compounds against a panel of 32 DUBs.
Full text:
1
Database:
MEDLINE
Main subject:
Protease Inhibitors
/
Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization
/
Ubiquitin-Specific Proteases
Type of study:
Diagnostic_studies
/
Screening_studies
Limits:
Humans
Language:
En
Journal:
Nat Commun
Journal subject:
BIOLOGIA
/
CIENCIA
Year:
2014
Type:
Article
Affiliation country:
United kingdom