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Genetic variation in the HLA region is associated with susceptibility to herpes zoster.
Crosslin, D R; Carrell, D S; Burt, A; Kim, D S; Underwood, J G; Hanna, D S; Comstock, B A; Baldwin, E; de Andrade, M; Kullo, I J; Tromp, G; Kuivaniemi, H; Borthwick, K M; McCarty, C A; Peissig, P L; Doheny, K F; Pugh, E; Kho, A; Pacheco, J; Hayes, M G; Ritchie, M D; Verma, S S; Armstrong, G; Stallings, S; Denny, J C; Carroll, R J; Crawford, D C; Crane, P K; Mukherjee, S; Bottinger, E; Li, R; Keating, B; Mirel, D B; Carlson, C S; Harley, J B; Larson, E B; Jarvik, G P.
Affiliation
  • Crosslin DR; 1] Division of Medical Genetics, Department of Medicine, University of Washington, Seattle, WA, USA [2] Department of Genome Sciences, University of Washington, Seattle, WA, USA.
  • Carrell DS; Group Health Research Institute, Group Health Cooperative, Seattle, WA, USA.
  • Burt A; Division of Medical Genetics, Department of Medicine, University of Washington, Seattle, WA, USA.
  • Kim DS; 1] Division of Medical Genetics, Department of Medicine, University of Washington, Seattle, WA, USA [2] Department of Genome Sciences, University of Washington, Seattle, WA, USA.
  • Underwood JG; Department of Genome Sciences, University of Washington, Seattle, WA, USA.
  • Hanna DS; Department of Genome Sciences, University of Washington, Seattle, WA, USA.
  • Comstock BA; Department of Biostatistics, University of Washington, Seattle, WA, USA.
  • Baldwin E; Group Health Research Institute, Group Health Cooperative, Seattle, WA, USA.
  • de Andrade M; Division of Biomedical Statistics and Informatics, Mayo Clinic, Rochester, MN, USA.
  • Kullo IJ; Division of Cardiovascular Diseases, Mayo Clinic, Rochester, MN, USA.
  • Tromp G; The Sigfried and Janet Weis Center for Research, Geisinger Health System, Danville, PA, USA.
  • Kuivaniemi H; The Sigfried and Janet Weis Center for Research, Geisinger Health System, Danville, PA, USA.
  • Borthwick KM; The Sigfried and Janet Weis Center for Research, Geisinger Health System, Danville, PA, USA.
  • McCarty CA; 1] Essentia Institute of Rural Health, Duluth, MN, USA [2] Center for Human Genetics, Marshfield Clinic Research Foundation, Marshfield, WI, USA.
  • Peissig PL; Center for Human Genetics, Marshfield Clinic Research Foundation, Marshfield, WI, USA.
  • Doheny KF; Center for Inherited Disease Research, Johns Hopkins University School of Medicine, Baltimore, MD, USA.
  • Pugh E; Center for Inherited Disease Research, Johns Hopkins University School of Medicine, Baltimore, MD, USA.
  • Kho A; Divisions of General Internal Medicine and Preventive Medicine, Feinberg School of Medicine, Northwestern University, Chicago, IL, USA.
  • Pacheco J; Divisions of General Internal Medicine and Preventive Medicine, Feinberg School of Medicine, Northwestern University, Chicago, IL, USA.
  • Hayes MG; Division of Endocrinology, Metabolism, and Molecular Medicine, Feinberg School of Medicine, Northwestern University, Chicago, IL, USA.
  • Ritchie MD; Center for Systems Genomics, Department of Biochemistry and Molecular Biology, Pennsylvania State University, Pennsylvania, PA, USA.
  • Verma SS; Center for Systems Genomics, Department of Biochemistry and Molecular Biology, Pennsylvania State University, Pennsylvania, PA, USA.
  • Armstrong G; Center for Systems Genomics, Department of Biochemistry and Molecular Biology, Pennsylvania State University, Pennsylvania, PA, USA.
  • Stallings S; Department of Biomedical Informatics, Vanderbilt University, Nashville, TN, USA.
  • Denny JC; Department of Biomedical Informatics, Vanderbilt University, Nashville, TN, USA.
  • Carroll RJ; Department of Biomedical Informatics, Vanderbilt University, Nashville, TN, USA.
  • Crawford DC; 1] Center for Human Genetics Research, Vanderbilt University, Nashville, TN, USA [2] Department of Molecular Physiology and Biophysics, Vanderbilt University, Nashville, TN, USA.
  • Crane PK; Division of General Internal Medicine, University of Washington, Seattle, WA, USA.
  • Mukherjee S; Division of General Internal Medicine, University of Washington, Seattle, WA, USA.
  • Bottinger E; The Charles Bronfman Institute for Personalized Medicine, Icahn School of Medicine, New York, NY, USA.
  • Li R; Division of Genomic Medicine, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD, USA.
  • Keating B; Center for Applied Genomics, Children's Hospital of Philadelphia, Philadelphia, PA, USA.
  • Mirel DB; Program in Medical and Population Genetics, Broad Institute of Harvard and MIT, Cambridge, MA, USA.
  • Carlson CS; Fred Hutchinson Cancer Research Center, Public Health Sciences Division, Seattle, WA, USA.
  • Harley JB; Cincinnati Children's Hospital Medical Center/Boston's Children's Hospital (CCHMC/BCH), Boston, MA, USA.
  • Larson EB; Group Health Research Institute, Group Health Cooperative, Seattle, WA, USA.
  • Jarvik GP; 1] Division of Medical Genetics, Department of Medicine, University of Washington, Seattle, WA, USA [2] Department of Genome Sciences, University of Washington, Seattle, WA, USA.
Genes Immun ; 16(1): 1-7, 2015.
Article in En | MEDLINE | ID: mdl-25297839
ABSTRACT
Herpes zoster, commonly referred to as shingles, is caused by the varicella zoster virus (VZV). VZV initially manifests as chicken pox, most commonly in childhood, can remain asymptomatically latent in nerve tissues for many years and often re-emerges as shingles. Although reactivation may be related to immune suppression, aging and female sex, most inter-individual variability in re-emergence risk has not been explained to date. We performed a genome-wide association analyses in 22,981 participants (2280 shingles cases) from the electronic Medical Records and Genomics Network. Using Cox survival and logistic regression, we identified a genomic region in the combined and European ancestry groups that has an age of onset effect reaching genome-wide significance (P>1.0 × 10(-8)). This region tags the non-coding gene HCP5 (HLA Complex P5) in the major histocompatibility complex. This gene is an endogenous retrovirus and likely influences viral activity through regulatory functions. Variants in this genetic region are known to be associated with delay in development of AIDS in people infected by HIV. Our study provides further suggestion that this region may have a critical role in viral suppression and could potentially harbor a clinically actionable variant for the shingles vaccine.
Subject(s)

Full text: 1 Database: MEDLINE Main subject: Herpesvirus 3, Human / Genetic Predisposition to Disease / RNA, Untranslated / Genome-Wide Association Study / Herpes Zoster Type of study: Etiology_studies / Incidence_studies / Observational_studies / Prognostic_studies / Risk_factors_studies Limits: Aged / Female / Humans / Male / Middle aged Country/Region as subject: America do norte Language: En Journal: Genes Immun Journal subject: ALERGIA E IMUNOLOGIA / BIOLOGIA MOLECULAR Year: 2015 Type: Article Affiliation country: United States

Full text: 1 Database: MEDLINE Main subject: Herpesvirus 3, Human / Genetic Predisposition to Disease / RNA, Untranslated / Genome-Wide Association Study / Herpes Zoster Type of study: Etiology_studies / Incidence_studies / Observational_studies / Prognostic_studies / Risk_factors_studies Limits: Aged / Female / Humans / Male / Middle aged Country/Region as subject: America do norte Language: En Journal: Genes Immun Journal subject: ALERGIA E IMUNOLOGIA / BIOLOGIA MOLECULAR Year: 2015 Type: Article Affiliation country: United States