Dominant bacterial phyla in caves and their predicted functional roles in C and N cycle.

De Mandal, Surajit; Chatterjee, Raghunath; Kumar, Nachimuthu Senthil

De Mandal, Surajit; Chatterjee, Raghunath; Kumar, Nachimuthu Senthil.

Affiliation

De Mandal S; Department of Biotechnology, Mizoram University, Aizawl, Mizoram, 796004, India.
Chatterjee R; Human Genetics Unit, Indian Statistical Institute, Kolkata, 700108, India.
Kumar NS; Department of Biotechnology, Mizoram University, Aizawl, Mizoram, 796004, India. nskmzu@gmail.com.

BMC Microbiol ; 17(1): 90, 2017 04 11.

Article in En | MEDLINE | ID: mdl-28399822

Subject(s)

Bacteria/classification; Bacteria/isolation & purification; Bacteria/metabolism; Carbon Cycle/physiology; Caves/microbiology; Nitrogen Cycle/physiology; Phylogeny; Amino Acids/metabolism; Ammonia/metabolism; Bacteria/genetics; Base Sequence; Biodiversity; Carbohydrate Metabolism; Carbon/metabolism; Classification; DNA, Bacterial; Ecology; Ferric Compounds/metabolism; Geologic Sediments/chemistry; Geologic Sediments/microbiology; India; Metabolic Networks and Pathways/physiology; Metagenome; Metagenomics; Nitrates/metabolism; Nitrification; Nitrogen/metabolism; RNA, Ribosomal, 16S/genetics; Sequence Analysis; Soil Microbiology; Survival

Key words

Biospeleology; Cave; Functional diversity; Illumina sequencing; KEGG pathways

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Full text: 1 Database: MEDLINE Main subject: Phylogeny / Bacteria / Nitrogen Cycle / Carbon Cycle / Caves Type of study: Prognostic_studies / Risk_factors_studies Country/Region as subject: Asia Language: En Journal: BMC Microbiol Journal subject: MICROBIOLOGIA Year: 2017 Type: Article Affiliation country: India

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