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Next-generation sequencing for hypothesis-free genomic detection of invasive tropical infections in poly-microbially contaminated, formalin-fixed, paraffin-embedded tissue samples - a proof-of-principle assessment.
Frickmann, Hagen; Künne, Carsten; Hagen, Ralf Matthias; Podbielski, Andreas; Normann, Jana; Poppert, Sven; Looso, Mario; Kreikemeyer, Bernd.
Affiliation
  • Frickmann H; Department of Microbiology and Hospital Hygiene, Bundeswehr Hospital Hamburg, Bernhard-Nocht Str. 74, 20359, Hamburg, Germany. Frickmann@bnitm.de.
  • Künne C; Institute for Microbiology, Virology and Hygiene, University Medicine Rostock, Schillingallee 70, 18057, Rostock, Germany. Frickmann@bnitm.de.
  • Hagen RM; Department of Bioinformatics, Max-Planck Institute for Heart and Lung Research Bad Nauheim, Parkstraße 1, 61231, Bad Nauheim, Germany.
  • Podbielski A; Department of Preventive Medicine, Bundeswehr Medical Academy, Neuherbergstraße 11, 80937, Munich, Germany.
  • Normann J; Institute for Microbiology, Virology and Hygiene, University Medicine Rostock, Schillingallee 70, 18057, Rostock, Germany.
  • Poppert S; Institute for Microbiology, Virology and Hygiene, University Medicine Rostock, Schillingallee 70, 18057, Rostock, Germany.
  • Looso M; Swiss Tropical and Public Health Institute, Socinstrasse 57, 4051, Basel, Switzerland.
  • Kreikemeyer B; Faculty of Medicine, University Basel, Socinstrasse 57, 4051, Basel, Switzerland.
BMC Microbiol ; 19(1): 75, 2019 04 08.
Article in En | MEDLINE | ID: mdl-30961537
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Full text: 1 Database: MEDLINE Main subject: High-Throughput Nucleotide Sequencing / Coinfection / Invasive Fungal Infections / Amebiasis Type of study: Diagnostic_studies / Prognostic_studies Limits: Humans Language: En Journal: BMC Microbiol Journal subject: MICROBIOLOGIA Year: 2019 Type: Article Affiliation country: Germany
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Full text: 1 Database: MEDLINE Main subject: High-Throughput Nucleotide Sequencing / Coinfection / Invasive Fungal Infections / Amebiasis Type of study: Diagnostic_studies / Prognostic_studies Limits: Humans Language: En Journal: BMC Microbiol Journal subject: MICROBIOLOGIA Year: 2019 Type: Article Affiliation country: Germany