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A generic workflow for Single Locus Sequence Typing (SLST) design and subspecies characterization of microbiota.
Ederveen, Thomas H A; Smits, Jos P H; Hajo, Karima; van Schalkwijk, Saskia; Kouwenhoven, Tessa A; Lukovac, Sabina; Wels, Michiel; van den Bogaard, Ellen H; Schalkwijk, Joost; Boekhorst, Jos; Zeeuwen, Patrick L J M; van Hijum, Sacha A F T.
Affiliation
  • Ederveen THA; Center for Molecular and Biomolecular Informatics (CMBI), Radboud Institute for Molecular Life Sciences (RIMLS), Radboud University Medical Center (Radboudumc), Nijmegen, The Netherlands. Tom.Ederveen@radboudumc.nl.
  • Smits JPH; Department of Dermatology, RIMLS, Radboudumc, Nijmegen, The Netherlands. Tom.Ederveen@radboudumc.nl.
  • Hajo K; NIZO, Ede, The Netherlands. Tom.Ederveen@radboudumc.nl.
  • van Schalkwijk S; Department of Dermatology, RIMLS, Radboudumc, Nijmegen, The Netherlands.
  • Kouwenhoven TA; Center for Molecular and Biomolecular Informatics (CMBI), Radboud Institute for Molecular Life Sciences (RIMLS), Radboud University Medical Center (Radboudumc), Nijmegen, The Netherlands.
  • Lukovac S; NIZO, Ede, The Netherlands.
  • Wels M; Department of Dermatology, RIMLS, Radboudumc, Nijmegen, The Netherlands.
  • van den Bogaard EH; NIZO, Ede, The Netherlands.
  • Schalkwijk J; Center for Molecular and Biomolecular Informatics (CMBI), Radboud Institute for Molecular Life Sciences (RIMLS), Radboud University Medical Center (Radboudumc), Nijmegen, The Netherlands.
  • Boekhorst J; NIZO, Ede, The Netherlands.
  • Zeeuwen PLJM; Department of Dermatology, RIMLS, Radboudumc, Nijmegen, The Netherlands.
  • van Hijum SAFT; Department of Dermatology, RIMLS, Radboudumc, Nijmegen, The Netherlands.
Sci Rep ; 9(1): 19834, 2019 12 27.
Article in En | MEDLINE | ID: mdl-31882601
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Full text: 1 Database: MEDLINE Main subject: Bacteria / Bacterial Typing Techniques / Computational Biology / Microbiota / Genes, Bacterial Limits: Female / Humans / Male Language: En Journal: Sci Rep Year: 2019 Type: Article Affiliation country: Netherlands
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Full text: 1 Database: MEDLINE Main subject: Bacteria / Bacterial Typing Techniques / Computational Biology / Microbiota / Genes, Bacterial Limits: Female / Humans / Male Language: En Journal: Sci Rep Year: 2019 Type: Article Affiliation country: Netherlands