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Metagenomic next-generation sequencing of rectal swabs for the surveillance of antimicrobial-resistant organisms on the Illumina Miseq and Oxford MinION platforms.
Yee, Rebecca; Breitwieser, Florian P; Hao, Stephanie; Opene, Belita N A; Workman, Rachael E; Tamma, Pranita D; Dien-Bard, Jennifer; Timp, Winston; Simner, Patricia J.
Affiliation
  • Yee R; Department of Pathology, Division of Medical Microbiology, Johns Hopkins University School of Medicine, Baltimore, MD, USA.
  • Breitwieser FP; Center for Computational Biology, McKusick-Nathans Institute of Genetic Medicine, Johns Hopkins School of Medicine, Baltimore, MD, USA.
  • Hao S; Department of Biomedical Engineering, Johns Hopkins University, Baltimore, MD, USA.
  • Opene BNA; Department of Pathology, Division of Medical Microbiology, Johns Hopkins University School of Medicine, Baltimore, MD, USA.
  • Workman RE; Department of Biomedical Engineering, Johns Hopkins University, Baltimore, MD, USA.
  • Tamma PD; Department of Pediatrics, Johns Hopkins University School of Medicine, Baltimore, MD, USA.
  • Dien-Bard J; Department of Pathology and Laboratory Medicine, Children's Hospital of Los Angeles and Keck School of Medicine at the University of Southern California, Los Angeles, CA, USA.
  • Timp W; Department of Biomedical Engineering, Johns Hopkins University, Baltimore, MD, USA.
  • Simner PJ; Department of Pathology, Division of Medical Microbiology, Johns Hopkins University School of Medicine, Baltimore, MD, USA. psimner1@jhmi.edu.
Eur J Clin Microbiol Infect Dis ; 40(1): 95-102, 2021 Jan.
Article in En | MEDLINE | ID: mdl-32783106
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Full text: 1 Database: MEDLINE Main subject: Carbapenems / Gram-Negative Bacterial Infections / Drug Resistance, Bacterial / Vancomycin-Resistant Enterococci / Gram-Negative Bacteria Type of study: Prognostic_studies / Screening_studies Limits: Humans Language: En Journal: Eur J Clin Microbiol Infect Dis Journal subject: DOENCAS TRANSMISSIVEIS / MICROBIOLOGIA Year: 2021 Type: Article Affiliation country: United States
Fulltext
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Full text: 1 Database: MEDLINE Main subject: Carbapenems / Gram-Negative Bacterial Infections / Drug Resistance, Bacterial / Vancomycin-Resistant Enterococci / Gram-Negative Bacteria Type of study: Prognostic_studies / Screening_studies Limits: Humans Language: En Journal: Eur J Clin Microbiol Infect Dis Journal subject: DOENCAS TRANSMISSIVEIS / MICROBIOLOGIA Year: 2021 Type: Article Affiliation country: United States