SPACEPro: A Software Tool for Analysis of Protein Sample Cleavage for Tandem Mass Spectrometry.

Kailash, Vidur; Mendoza, Luis; Moritz, Robert L; Hoopmann, Michael R

Kailash, Vidur; Mendoza, Luis; Moritz, Robert L; Hoopmann, Michael R.

Affiliation

Kailash V; Institute for Systems Biology, Seattle, Washington 98109, United States.
Mendoza L; Institute for Systems Biology, Seattle, Washington 98109, United States.
Moritz RL; Institute for Systems Biology, Seattle, Washington 98109, United States.
Hoopmann MR; Institute for Systems Biology, Seattle, Washington 98109, United States.

J Proteome Res ; 20(4): 1911-1917, 2021 04 02.

Article in En | MEDLINE | ID: mdl-33529024

Subject(s)

Proteomics; Tandem Mass Spectrometry; Humans; Reproducibility of Results; Software; Trypsin

Key words

bottom-up mass spectrometry; chemical cleavage; cleavage efficiency; data-dependent analysis; endopeptidase; endoprotease; enzymatic digestion; missed cleavage; nonspecific cleavage; shotgun mass spectrometry; trypsin

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Full text: 1 Database: MEDLINE Main subject: Proteomics / Tandem Mass Spectrometry Limits: Humans Language: En Journal: J Proteome Res Journal subject: BIOQUIMICA Year: 2021 Type: Article Affiliation country: United States

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