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Scope and limitations of absolute configuration determination of allenic natural products using the CCC stretching VCD signal.
Taniguchi, Tohru; Takimoto, Shu; Suzuki, Takahiro; Watanabe, Soichiro; Matsuda, Fuyuhiko; Umezawa, Taiki; Monde, Kenji.
Affiliation
  • Taniguchi T; Frontier Research Center for Advanced Material and Life Science, Faculty of Advanced Life Science, Hokkaido University, North 21 West 11, Sapporo 001-0021, Japan. ttaniguchi@sci.hokudai.ac.jp.
  • Mutmainah; Graduate School of Life Science, Hokkaido University, North 21 West 11, Sapporo 001-0021, Japan.
  • Takimoto S; Graduate School of Life Science, Hokkaido University, North 21 West 11, Sapporo 001-0021, Japan.
  • Suzuki T; Department of Chemistry, Faculty of Science, Hokkaido University, North 10 West 8, Sapporo 060-0810, Japan.
  • Watanabe S; Graduate School of Chemical Sciences and Engineering, Hokkaido University, North 13 West 8, Sapporo 060-8628, Japan.
  • Matsuda F; Division of Environmental Materials Science, Graduate School of Environmental Science, Hokkaido University, North 10 West 5, Sapporo 060-0810, Japan.
  • Umezawa T; Division of Environmental Materials Science, Graduate School of Environmental Science, Hokkaido University, North 10 West 5, Sapporo 060-0810, Japan.
  • Monde K; Frontier Research Center for Advanced Material and Life Science, Faculty of Advanced Life Science, Hokkaido University, North 21 West 11, Sapporo 001-0021, Japan. ttaniguchi@sci.hokudai.ac.jp.
Org Biomol Chem ; 21(3): 569-574, 2023 01 18.
Article in En | MEDLINE | ID: mdl-36541676
The allene functional group in natural products isolated so far exists in a non-racemic form, but its axial chirality is difficult to elucidate. Allenes exhibit a characteristic antisymmetric CCC stretching mode at around 1950 cm-1, and their VCD properties have not been studied in detail. This work, for the first time, applied VCD spectroscopy to allenic natural products and allenic molecules with other asymmetric centers focusing on the antisymmetric CCC stretching mode. This vibrational mode yielded a negligibly weak VCD signal for several molecules, but in the presence of electron-withdrawing and/or conjugating substituents, it generated a stronger one. Its sign was found to be influenced by the nature of substituents. These findings should deepen the understanding of the VCD properties of the allene functional group and should be useful for future studies of chiral allenes.
Subject(s)

Full text: 1 Database: MEDLINE Main subject: Circular Dichroism Language: En Journal: Org Biomol Chem Journal subject: BIOQUIMICA / QUIMICA Year: 2023 Type: Article Affiliation country: Japan

Full text: 1 Database: MEDLINE Main subject: Circular Dichroism Language: En Journal: Org Biomol Chem Journal subject: BIOQUIMICA / QUIMICA Year: 2023 Type: Article Affiliation country: Japan