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Hemolytik: a database of experimentally determined hemolytic and non-hemolytic peptides.
Gautam, Ankur; Chaudhary, Kumardeep; Singh, Sandeep; Joshi, Anshika; Anand, Priya; Tuknait, Abhishek; Mathur, Deepika; Varshney, Grish C; Raghava, Gajendra P S.
Afiliación
  • Gautam A; Bioinformatics Centre, CSIR-Institute of Microbial Technology, Chandigarh 160036, India and Cell Biology and Immunology Division, CSIR-Institute of Microbial Technology, Chandigarh 160036, India.
Nucleic Acids Res ; 42(Database issue): D444-9, 2014 Jan.
Article en En | MEDLINE | ID: mdl-24174543
Hemolytik (http://crdd.osdd.net/raghava/hemolytik/) is a manually curated database of experimentally determined hemolytic and non-hemolytic peptides. Data were compiled from a large number of published research articles and various databases like Antimicrobial Peptide Database, Collection of Anti-microbial Peptides, Dragon Antimicrobial Peptide Database and Swiss-Prot. The current release of Hemolytik database contains ∼3000 entries that include ∼2000 unique peptides whose hemolytic activities were evaluated on erythrocytes isolated from as many as 17 different sources. Each entry in Hemolytik provides comprehensive information about a peptide, like its name, sequence, origin, reported function, property such as chirality, types (linear and cyclic), end modifications as well as details pertaining to its hemolytic activity. In addition, tertiary structure of each peptide has been predicted, and secondary structure states have been assigned. To facilitate the scientific community, a user-friendly interface has been developed with various tools for data searching and analysis. We hope, Hemolytik will be useful for researchers working in the field of designing therapeutic peptides.
Asunto(s)

Texto completo: 1 Bases de datos: MEDLINE Asunto principal: Péptidos / Bases de Datos de Proteínas / Hemolíticos Idioma: En Revista: Nucleic Acids Res Año: 2014 Tipo del documento: Article País de afiliación: India

Texto completo: 1 Bases de datos: MEDLINE Asunto principal: Péptidos / Bases de Datos de Proteínas / Hemolíticos Idioma: En Revista: Nucleic Acids Res Año: 2014 Tipo del documento: Article País de afiliación: India