Optimizing taxonomic classification of marker-gene amplicon sequences with QIIME 2's q2-feature-classifier plugin.

Bokulich, Nicholas A; Kaehler, Benjamin D; Rideout, Jai Ram; Dillon, Matthew; Bolyen, Evan; Knight, Rob; Huttley, Gavin A; Gregory Caporaso, J

Bokulich, Nicholas A; Kaehler, Benjamin D; Rideout, Jai Ram; Dillon, Matthew; Bolyen, Evan; Knight, Rob; Huttley, Gavin A; Gregory Caporaso, J.

Afiliación

Bokulich NA; The Pathogen and Microbiome Institute, Northern Arizona University, PO Box 4073, Flagstaff, AZ, 86011-4073, USA. nicholas.bokulich@nau.edu.
Kaehler BD; Research School of Biology, Australian National University, 46 Sullivans Creek Road, Acton ACT, 2601, Australia. benjamin.kaehler@anu.edu.au.
Rideout JR; The Pathogen and Microbiome Institute, Northern Arizona University, PO Box 4073, Flagstaff, AZ, 86011-4073, USA.
Dillon M; The Pathogen and Microbiome Institute, Northern Arizona University, PO Box 4073, Flagstaff, AZ, 86011-4073, USA.
Bolyen E; The Pathogen and Microbiome Institute, Northern Arizona University, PO Box 4073, Flagstaff, AZ, 86011-4073, USA.
Knight R; Departments of Pediatrics and Computer Science and Engineering, and Center for Microbiome Innovation, University of California San Diego, La Jolla, CA, USA.
Huttley GA; Research School of Biology, Australian National University, 46 Sullivans Creek Road, Acton ACT, 2601, Australia. gavin.huttley@anu.edu.au.
Gregory Caporaso J; The Pathogen and Microbiome Institute, Northern Arizona University, PO Box 4073, Flagstaff, AZ, 86011-4073, USA. gregcaporaso@gmail.com.

Microbiome ; 6(1): 90, 2018 05 17.

Article en En | MEDLINE | ID: mdl-29773078

Asunto(s)

Bacterias/genética; Simulación por Computador; ADN Intergénico/genética; Hongos/genética; Microbiota/genética; ARN Ribosómico 16S/genética; Alineación de Secuencia/métodos; Algoritmos; Secuencia de Bases/genética; Aprendizaje Automático; Programas Informáticos

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Texto completo: 1 Bases de datos: MEDLINE Asunto principal: Bacterias / Simulación por Computador / ARN Ribosómico 16S / Alineación de Secuencia / ADN Intergénico / Microbiota / Hongos Idioma: En Revista: Microbiome Año: 2018 Tipo del documento: Article País de afiliación: Estados Unidos

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