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Siesta: Recent developments and applications.
García, Alberto; Papior, Nick; Akhtar, Arsalan; Artacho, Emilio; Blum, Volker; Bosoni, Emanuele; Brandimarte, Pedro; Brandbyge, Mads; Cerdá, J I; Corsetti, Fabiano; Cuadrado, Ramón; Dikan, Vladimir; Ferrer, Jaime; Gale, Julian; García-Fernández, Pablo; García-Suárez, V M; García, Sandra; Huhs, Georg; Illera, Sergio; Korytár, Richard; Koval, Peter; Lebedeva, Irina; Lin, Lin; López-Tarifa, Pablo; Mayo, Sara G; Mohr, Stephan; Ordejón, Pablo; Postnikov, Andrei; Pouillon, Yann; Pruneda, Miguel; Robles, Roberto; Sánchez-Portal, Daniel; Soler, Jose M; Ullah, Rafi; Yu, Victor Wen-Zhe; Junquera, Javier.
Afiliación
  • García A; Institut de Ciència de Materials de Barcelona (ICMAB-CSIC), Bellaterra E-08193, Spain.
  • Papior N; DTU Computing Center, Technical University of Denmark, 2800 Kgs. Lyngby, Denmark.
  • Akhtar A; Catalan Institute of Nanoscience and Nanotechnology - ICN2, CSIC and BIST, Campus UAB, 08193 Bellaterra, Spain.
  • Artacho E; CIC Nanogune BRTA, Tolosa Hiribidea 76, 20018 San Sebastián, Spain.
  • Blum V; Department of Mechanical Engineering and Materials Science, Duke University, Durham, North Carolina 27708, USA.
  • Bosoni E; Institut de Ciència de Materials de Barcelona (ICMAB-CSIC), Bellaterra E-08193, Spain.
  • Brandimarte P; Donostia International Physics Center (DIPC), Paseo Manuel de Lardizabal 4, 20018 Donostia-San Sebastian, Spain.
  • Brandbyge M; DTU Physics, Center for Nanostructured Graphene (CNG), Technical University of Denmark, Kgs. Lyngby DK-2800, Denmark.
  • Cerdá JI; Instituto de Ciencia de Materiales de Madrid ICMM-CSIC, Cantoblanco, 28049 Madrid, Spain.
  • Corsetti F; CIC Nanogune BRTA, Tolosa Hiribidea 76, 20018 San Sebastián, Spain.
  • Cuadrado R; Catalan Institute of Nanoscience and Nanotechnology - ICN2, CSIC and BIST, Campus UAB, 08193 Bellaterra, Spain.
  • Dikan V; Institut de Ciència de Materials de Barcelona (ICMAB-CSIC), Bellaterra E-08193, Spain.
  • Ferrer J; Department of Physics, University of Oviedo, Oviedo 33007, Spain.
  • Gale J; Curtin Institute for Computation, Institute for Geoscience Research (TIGeR), School of Molecular and Life Sciences, Curtin University, P.O. Box U1987, Perth, WA 6845, Australia.
  • García-Fernández P; Departamento de Ciencias de la Tierra y Física de la Materia Condensada, Universidad de Cantabria, Cantabria Campus Internacional, Avenida de los Castros s/n, 39005 Santander, Spain.
  • García-Suárez VM; Department of Physics, University of Oviedo, Oviedo 33007, Spain.
  • García S; Catalan Institute of Nanoscience and Nanotechnology - ICN2, CSIC and BIST, Campus UAB, 08193 Bellaterra, Spain.
  • Huhs G; Barcelona Supercomputing Center, c/Jordi Girona, 29, 08034 Barcelona, Spain.
  • Illera S; Catalan Institute of Nanoscience and Nanotechnology - ICN2, CSIC and BIST, Campus UAB, 08193 Bellaterra, Spain.
  • Korytár R; Department of Condensed Matter Physics, Faculty of Mathematics and Physics, Charles University, Ke Karlovu 5, 121 16 Praha 2, Czech Republic.
  • Koval P; Simune Atomistics S.L., Tolosa Hiribidea, 76, 20018 Donostia-San Sebastian, Spain.
  • Lebedeva I; CIC Nanogune BRTA, Tolosa Hiribidea 76, 20018 San Sebastián, Spain.
  • Lin L; Department of Mathematics, University of California, Berkeley, California 94720, USA.
  • López-Tarifa P; Centro de Física de Materiales, Centro Mixto CSIC-UPV/EHU, Paseo Manuel de Lardizabal 5, 20018 Donostia-San Sebastian, Spain.
  • Mayo SG; Departamento de Física de la Materia Condensada, Universidad Autónoma de Madrid, 28049 Madrid, Spain.
  • Mohr S; Barcelona Supercomputing Center, c/Jordi Girona, 29, 08034 Barcelona, Spain.
  • Ordejón P; Catalan Institute of Nanoscience and Nanotechnology - ICN2, CSIC and BIST, Campus UAB, 08193 Bellaterra, Spain.
  • Postnikov A; LCP-A2MC, Université de Lorraine, 1 Bd Arago, F-57078 Metz, France.
  • Pouillon Y; Departamento de Ciencias de la Tierra y Física de la Materia Condensada, Universidad de Cantabria, Cantabria Campus Internacional, Avenida de los Castros s/n, 39005 Santander, Spain.
  • Pruneda M; Catalan Institute of Nanoscience and Nanotechnology - ICN2, CSIC and BIST, Campus UAB, 08193 Bellaterra, Spain.
  • Robles R; Centro de Física de Materiales, Centro Mixto CSIC-UPV/EHU, Paseo Manuel de Lardizabal 5, 20018 Donostia-San Sebastian, Spain.
  • Sánchez-Portal D; Donostia International Physics Center (DIPC), Paseo Manuel de Lardizabal 4, 20018 Donostia-San Sebastian, Spain.
  • Soler JM; Departamento de Física de la Materia Condensada, Universidad Autónoma de Madrid, 28049 Madrid, Spain.
  • Ullah R; CIC Nanogune BRTA, Tolosa Hiribidea 76, 20018 San Sebastián, Spain.
  • Yu VW; Department of Mechanical Engineering and Materials Science, Duke University, Durham, North Carolina 27708, USA.
  • Junquera J; Departamento de Ciencias de la Tierra y Física de la Materia Condensada, Universidad de Cantabria, Cantabria Campus Internacional, Avenida de los Castros s/n, 39005 Santander, Spain.
J Chem Phys ; 152(20): 204108, 2020 May 29.
Article en En | MEDLINE | ID: mdl-32486661
ABSTRACT
A review of the present status, recent enhancements, and applicability of the Siesta program is presented. Since its debut in the mid-1990s, Siesta's flexibility, efficiency, and free distribution have given advanced materials simulation capabilities to many groups worldwide. The core methodological scheme of Siesta combines finite-support pseudo-atomic orbitals as basis sets, norm-conserving pseudopotentials, and a real-space grid for the representation of charge density and potentials and the computation of their associated matrix elements. Here, we describe the more recent implementations on top of that core scheme, which include full spin-orbit interaction, non-repeated and multiple-contact ballistic electron transport, density functional theory (DFT)+U and hybrid functionals, time-dependent DFT, novel reduced-scaling solvers, density-functional perturbation theory, efficient van der Waals non-local density functionals, and enhanced molecular-dynamics options. In addition, a substantial effort has been made in enhancing interoperability and interfacing with other codes and utilities, such as wannier90 and the second-principles modeling it can be used for, an AiiDA plugin for workflow automatization, interface to Lua for steering Siesta runs, and various post-processing utilities. Siesta has also been engaged in the Electronic Structure Library effort from its inception, which has allowed the sharing of various low-level libraries, as well as data standards and support for them, particularly the PSeudopotential Markup Language definition and library for transferable pseudopotentials, and the interface to the ELectronic Structure Infrastructure library of solvers. Code sharing is made easier by the new open-source licensing model of the program. This review also presents examples of application of the capabilities of the code, as well as a view of on-going and future developments.

Texto completo: 1 Bases de datos: MEDLINE Idioma: En Revista: J Chem Phys Año: 2020 Tipo del documento: Article País de afiliación: España

Texto completo: 1 Bases de datos: MEDLINE Idioma: En Revista: J Chem Phys Año: 2020 Tipo del documento: Article País de afiliación: España