Profiling the BLAST bioinformatics application for load balancing on high-performance computing clusters.

Cheng, Trinity; Chin, Pei-Ju; Cha, Kenny; Petrick, Nicholas; Mikailov, Mike

Cheng, Trinity; Chin, Pei-Ju; Cha, Kenny; Petrick, Nicholas; Mikailov, Mike.

Afiliación

Cheng T; Center for Devices and Radiological Health, U.S. Food and Drug Administration, Silver Spring, MD, 20993, USA.
Chin PJ; Department of Biomedical Engineering, Whiting School of Engineering, Johns Hopkins University, Baltimore, MD, 21218, USA.
Cha K; Center for Biologics Evaluation and Research, U.S. Food and Drug Administration, Silver Spring, MD, 20993, USA.
Petrick N; Center for Devices and Radiological Health, U.S. Food and Drug Administration, Silver Spring, MD, 20993, USA.
Mikailov M; Center for Devices and Radiological Health, U.S. Food and Drug Administration, Silver Spring, MD, 20993, USA.

BMC Bioinformatics ; 23(1): 544, 2022 Dec 16.

Article en En | MEDLINE | ID: mdl-36526957

Asunto(s)

Metodologías Computacionales; Programas Informáticos; Algoritmos; Biología Computacional/métodos; Alineación de Secuencia

Palabras clave

BLAST; High performance computing (HPC); Load balancing; Parallelization; Performance model; Profiling

Texto completo

Añadir a Mi BVS

Imprimir

XML

PubMed Links

Buscar en Google

Texto completo: 1 Bases de datos: MEDLINE Asunto principal: Programas Informáticos / Metodologías Computacionales Tipo de estudio: Prognostic_studies / Qualitative_research Idioma: En Revista: BMC Bioinformatics Asunto de la revista: INFORMATICA MEDICA Año: 2022 Tipo del documento: Article País de afiliación: Estados Unidos

Texto completo

Añadir a Mi BVS

Imprimir

XML

PubMed Links

Buscar en Google