The complete genome sequence of Stellaria aquatica virus A, a new member of the genus Alphacarmovirus, family Tombusviridae.
Arch Virol
; 168(3): 90, 2023 Feb 14.
Article
en En
| MEDLINE
| ID: mdl-36786910
ABSTRACT
A new member of the genus Alphacarmovirus was detected in Stellaria aquatica using high-throughput RNA sequencing analysis. The complete genome sequence of this new virus isolate, tentatively named "Stellaria aquatica virus A" (StAV-A), comprises 4,017 nucleotides with five predicted open reading frames (ORFs) and has a typical alphacarmovirus genome organization. Pairwise comparison of StAV-A with selected members of family Tombusviridae showed 44-58%, 32-64%, and 19-49% sequence identity for the overall nucleotide sequence, polymerase, and coat protein, respectively. Phylogenetic analysis of polymerase sequences places StAV-A alongside other members of the genus Alphacarmovirus in the family Tombusviridae.
Texto completo:
1
Bases de datos:
MEDLINE
Asunto principal:
Tombusviridae
/
Stellaria
Idioma:
En
Revista:
Arch Virol
Año:
2023
Tipo del documento:
Article