scSNPdemux: a sensitive demultiplexing pipeline using single nucleotide polymorphisms for improved pooled single-cell RNA sequencing analysis.

Wong, John K L; Jassowicz, Lena; Herold-Mende, Christel; Seiffert, Martina; Mallm, Jan-Philipp; Lichter, Peter; Zapatka, Marc

Wong, John K L; Jassowicz, Lena; Herold-Mende, Christel; Seiffert, Martina; Mallm, Jan-Philipp; Lichter, Peter; Zapatka, Marc.

Afiliación

Wong JKL; Division of Molecular Genetics, German Cancer Research Center, Heidelberg, Germany. wkljohn@gmail.com.
Jassowicz L; Division of Molecular Genetics, German Cancer Research Center, Heidelberg, Germany.
Herold-Mende C; Division of Experimental Neurosurgery, Department of Neurosurgery, Heidelberg University Hospital, Heidelberg, Germany.
Seiffert M; Division of Experimental Neurosurgery, Department of Neurosurgery, Heidelberg University Hospital, Heidelberg, Germany.
Mallm JP; Division of Molecular Genetics, German Cancer Research Center, Heidelberg, Germany.
Lichter P; Single-Cell Open Lab, German Cancer Research Center, Heidelberg, Germany.
Zapatka M; Division of Molecular Genetics, German Cancer Research Center, Heidelberg, Germany.

BMC Bioinformatics ; 24(1): 326, 2023 Aug 31.

Article en En | MEDLINE | ID: mdl-37653401

Asunto(s)

Exactitud de los Datos; Polimorfismo de Nucleótido Simple; Humanos; Biblioteca de Genes; Genómica; Genotipo

Palabras clave

Sample demultiplexing; Sample pooling; Single nucleotide polymorphisms; Single-cell

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Texto completo: 1 Bases de datos: MEDLINE Asunto principal: Polimorfismo de Nucleótido Simple / Exactitud de los Datos Tipo de estudio: Diagnostic_studies Límite: Humans Idioma: En Revista: BMC Bioinformatics Asunto de la revista: INFORMATICA MEDICA Año: 2023 Tipo del documento: Article País de afiliación: Alemania

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