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A pan-sarcoma landscape of telomeric content shows that alterations in RAD51B and GID4 are associated with higher telomeric content.
Sharaf, Radwa; Jin, Dexter X; Grady, John; Napier, Christine; Ebot, Ericka; Frampton, Garrett M; Albacker, Lee A; Thomas, David M; Montesion, Meagan.
Afiliación
  • Sharaf R; Foundation Medicine Inc., Cambridge, MA, USA.
  • Jin DX; Foundation Medicine Inc., Cambridge, MA, USA.
  • Grady J; Omico Australian Genomic Cancer Medicine, Sydney, Australia.
  • Napier C; Garvan Institute of Medical Research, Sydney, Australia.
  • Ebot E; St Vincent's Clinical School, University of New South Wales, Sydney, Australia.
  • Frampton GM; Omico Australian Genomic Cancer Medicine, Sydney, Australia.
  • Albacker LA; Garvan Institute of Medical Research, Sydney, Australia.
  • Thomas DM; St Vincent's Clinical School, University of New South Wales, Sydney, Australia.
  • Montesion M; Foundation Medicine Inc., Cambridge, MA, USA.
NPJ Genom Med ; 8(1): 26, 2023 Sep 14.
Article en En | MEDLINE | ID: mdl-37709802
Tumor cells need to activate a telomere maintenance mechanism, enabling limitless replication. The bulk of evidence supports that sarcomas predominantly use alternative lengthening of telomeres (ALT) mechanism, commonly associated with alterations in ATRX and DAXX. In our dataset, only 12.3% of sarcomas harbored alterations in these genes. Thus, we checked for the presence of other genomic determinants of high telomeric content in sarcomas. Our dataset consisted of 13555 sarcoma samples, sequenced as a part of routine clinical care on the FoundationOne®Heme platform. We observed a median telomeric content of 622.3 telomeric reads per GC-matched million reads (TRPM) across all samples. In agreement with previous studies, telomeric content was significantly higher in ATRX altered and POT1 altered sarcomas. We further observed that sarcomas with alterations in RAD51B or GID4 were enriched in samples with high telomeric content, specifically within uterus leiomyosarcoma for RAD51B and soft tissue sarcoma (not otherwise specified, nos) for GID4, Furthermore, RAD51B and POT1 alterations were mutually exclusive with ATRX and DAXX alterations, suggestive of functional redundancy. Our results propose a role played by RAD51B and GID4 in telomere elongation in sarcomas and open research opportunities for agents aimed at targeting this critical pathway in tumorigenesis.

Texto completo: 1 Bases de datos: MEDLINE Tipo de estudio: Guideline / Risk_factors_studies Idioma: En Revista: NPJ Genom Med Año: 2023 Tipo del documento: Article País de afiliación: Estados Unidos

Texto completo: 1 Bases de datos: MEDLINE Tipo de estudio: Guideline / Risk_factors_studies Idioma: En Revista: NPJ Genom Med Año: 2023 Tipo del documento: Article País de afiliación: Estados Unidos