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NMR assignment of intrinsically disordered self-processing module of the FrpC protein of Neisseria meningitidis.
Kubán, Vojtech; Novácek, Jirí; Bumba, Ladislav; Zídek, Lukás.
Afiliação
  • Kubán V; CEITEC, Masaryk University, Kamenice 5, 62500, Brno, Czech Republic.
  • Novácek J; CEITEC, Masaryk University, Kamenice 5, 62500, Brno, Czech Republic.
  • Bumba L; Institute of Microbiology of the ASCR, v. v. i, Vídenská 1083, 14220, Prague 4, Czech Republic.
  • Zídek L; CEITEC, Masaryk University, Kamenice 5, 62500, Brno, Czech Republic. lzidek@chemi.muni.cz.
Biomol NMR Assign ; 9(2): 435-40, 2015 Oct.
Article em En | MEDLINE | ID: mdl-26138689
The self-processing module (SPM) is an internal segment of the FrpC protein (P415-F591) secreted by the pathogenic Gram-negative bacterium Neisseria meningitidis during meningococcal infection of human upper respiratory tract. SPM mediates 'protein trans-splicing', a unique natural mechanism for editing of proteins, which involves a calcium-dependent autocatalytic cleavage of the peptide bond between D414 and P415 and covalent linkage of the cleaved fragment through its carboxy-terminal group of D414 to [Formula: see text]-amino group of lysine residue within a neighboring polypeptide chain. We present an NMR resonance assignment of the calcium-free SPM, which displays characteristic features of intrinsically disordered proteins. Non-uniformly sampled 5D HN(CA)CONH, 4D HCBCACON, and HCBCANCO spectra were recorded to resolve poorly dispersed resonance frequencies of the disordered protein and 91 % of SPM residues were unambiguously assigned. Analysis of the chemical shifts revealed that two regions of the intrinsically disordered SPM (A95-S101 and R120-I127) have a tendency to form a helical structure, whereas the residues P1-D7 and G36-A40 have the propensity to adopt a [Formula: see text]-structure.
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Texto completo: 1 Bases de dados: MEDLINE Assunto principal: Proteínas de Bactérias / Ressonância Magnética Nuclear Biomolecular / Proteínas Intrinsicamente Desordenadas / Proteínas de Membrana / Neisseria meningitidis Idioma: En Revista: Biomol NMR Assign Assunto da revista: BIOLOGIA MOLECULAR / MEDICINA NUCLEAR Ano de publicação: 2015 Tipo de documento: Article País de afiliação: República Tcheca

Texto completo: 1 Bases de dados: MEDLINE Assunto principal: Proteínas de Bactérias / Ressonância Magnética Nuclear Biomolecular / Proteínas Intrinsicamente Desordenadas / Proteínas de Membrana / Neisseria meningitidis Idioma: En Revista: Biomol NMR Assign Assunto da revista: BIOLOGIA MOLECULAR / MEDICINA NUCLEAR Ano de publicação: 2015 Tipo de documento: Article País de afiliação: República Tcheca