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miRandola 2017: a curated knowledge base of non-invasive biomarkers.
Russo, Francesco; Di Bella, Sebastiano; Vannini, Federica; Berti, Gabriele; Scoyni, Flavia; Cook, Helen V; Santos, Alberto; Nigita, Giovanni; Bonnici, Vincenzo; Laganà, Alessandro; Geraci, Filippo; Pulvirenti, Alfredo; Giugno, Rosalba; De Masi, Federico; Belling, Kirstine; Jensen, Lars J; Brunak, Søren; Pellegrini, Marco; Ferro, Alfredo.
Afiliação
  • Russo F; Disease Systems Biology, Novo Nordisk Foundation Center for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, 2200, Denmark.
  • Di Bella S; Business Unit Oncology, Nerviano Medical Sciences, Milan, 20014, Italy.
  • Vannini F; Institute of Life Sciences, Scuola Superiore Sant'Anna, Pisa, 56127, Italy.
  • Berti G; Institute of Life Sciences, Scuola Superiore Sant'Anna, Pisa, 56127, Italy.
  • Scoyni F; University of Eastern Finland, Kuopio, 72010, Finland.
  • Cook HV; Disease Systems Biology, Novo Nordisk Foundation Center for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, 2200, Denmark.
  • Santos A; Disease Systems Biology, Novo Nordisk Foundation Center for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, 2200, Denmark.
  • Nigita G; Clinical Proteomics, Novo Nordisk Foundation Center for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, 2200, Denmark.
  • Bonnici V; Department of Cancer Biology and Genetics, The Ohio State University, OH 43210, USA.
  • Laganà A; Department of Computer Science, University of Verona, Verona, 37134, Italy.
  • Geraci F; Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY 10029-6574, USA.
  • Pulvirenti A; Institute of Informatics and Telematics (IIT), National Research Council (CNR), Pisa, 56124, Italy.
  • Giugno R; Department of Clinical and Experimental Medicine, University of Catania, Catania, 95125, Italy.
  • De Masi F; Department of Computer Science, University of Verona, Verona, 37134, Italy.
  • Belling K; Department of Bio and Health Informatics, DTU Bioinformatics, Technical University of Denmark, Lyngby, 2800, Denmark.
  • Jensen LJ; Disease Systems Biology, Novo Nordisk Foundation Center for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, 2200, Denmark.
  • Brunak S; Disease Systems Biology, Novo Nordisk Foundation Center for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, 2200, Denmark.
  • Pellegrini M; Disease Systems Biology, Novo Nordisk Foundation Center for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, 2200, Denmark.
  • Ferro A; Institute of Informatics and Telematics (IIT), National Research Council (CNR), Pisa, 56124, Italy.
Nucleic Acids Res ; 46(D1): D354-D359, 2018 01 04.
Article em En | MEDLINE | ID: mdl-29036351
miRandola (http://mirandola.iit.cnr.it/) is a database of extracellular non-coding RNAs (ncRNAs) that was initially published in 2012, foreseeing the relevance of ncRNAs as non-invasive biomarkers. An increasing amount of experimental evidence shows that ncRNAs are frequently dysregulated in diseases. Further, ncRNAs have been discovered in different extracellular forms, such as exosomes, which circulate in human body fluids. Thus, miRandola 2017 is an effort to update and collect the accumulating information on extracellular ncRNAs that is spread across scientific publications and different databases. Data are manually curated from 314 articles that describe miRNAs, long non-coding RNAs and circular RNAs. Fourteen organisms are now included in the database, and associations of ncRNAs with 25 drugs, 47 sample types and 197 diseases. miRandola also classifies extracellular RNAs based on their extracellular form: Argonaute2 protein, exosome, microvesicle, microparticle, membrane vesicle, high density lipoprotein and circulating. We also implemented a new web interface to improve the user experience.
Assuntos

Texto completo: 1 Bases de dados: MEDLINE Assunto principal: RNA não Traduzido / Bases de Dados Genéticas / Bases de Conhecimento Limite: Humans Idioma: En Revista: Nucleic Acids Res Ano de publicação: 2018 Tipo de documento: Article País de afiliação: Dinamarca

Texto completo: 1 Bases de dados: MEDLINE Assunto principal: RNA não Traduzido / Bases de Dados Genéticas / Bases de Conhecimento Limite: Humans Idioma: En Revista: Nucleic Acids Res Ano de publicação: 2018 Tipo de documento: Article País de afiliação: Dinamarca