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Boosting the resolution of low-field [Formula: see text] relaxation experiments on intrinsically disordered proteins with triple-resonance NMR.
Jasenáková, Zuzana; Zapletal, Vojtech; Padrta, Petr; Zachrdla, Milan; Bolik-Coulon, Nicolas; Marquardsen, Thorsten; Tyburn, Jean-Max; Zídek, Lukás; Ferrage, Fabien; Kaderávek, Pavel.
Afiliação
  • Jasenáková Z; National Centre for Biomolecular Research, Faculty of Science and Central European Institute of Technology, Masaryk University, Kamenice 5, 625 00, Brno, Czech Republic.
  • Zapletal V; National Centre for Biomolecular Research, Faculty of Science and Central European Institute of Technology, Masaryk University, Kamenice 5, 625 00, Brno, Czech Republic.
  • Padrta P; Central European Institute of Technology, Masaryk University, Kamenice 5, 625 00, Brno, Czech Republic.
  • Zachrdla M; Laboratoire des Biomolécules, LBM, Département de chimie, École normale supérieure, PSL University, Sorbonne Université, CNRS, 75005, Paris, France.
  • Bolik-Coulon N; Laboratoire des Biomolécules, LBM, Département de chimie, École normale supérieure, PSL University, Sorbonne Université, CNRS, 75005, Paris, France.
  • Marquardsen T; Bruker BioSpin GmbH, Silberstreifen 4, 76287, Rheinstetten, Germany.
  • Tyburn JM; Bruker BioSpin, 34 rue de l'Industrie BP 10002, 67166, Wissembourg Cedex, France.
  • Zídek L; National Centre for Biomolecular Research, Faculty of Science and Central European Institute of Technology, Masaryk University, Kamenice 5, 625 00, Brno, Czech Republic.
  • Ferrage F; Laboratoire des Biomolécules, LBM, Département de chimie, École normale supérieure, PSL University, Sorbonne Université, CNRS, 75005, Paris, France. fabien.ferrage@ens.fr.
  • Kaderávek P; Central European Institute of Technology, Masaryk University, Kamenice 5, 625 00, Brno, Czech Republic. pavel.kaderavek@mail.muni.cz.
J Biomol NMR ; 74(2-3): 139-145, 2020 Mar.
Article em En | MEDLINE | ID: mdl-31960224
ABSTRACT
Improving our understanding of nanosecond motions in disordered proteins requires the enhanced sampling of the spectral density function obtained from relaxation at low magnetic fields. High-resolution relaxometry and two-field NMR measurements of relaxation have, so far, only been based on the recording of one- or two-dimensional spectra, which provide insufficient resolution for challenging disordered proteins. Here, we introduce a 3D-HNCO-based two-field NMR experiment for measurements of protein backbone [Formula see text] amide longitudinal relaxation rates. The experiment provides accurate longitudinal relaxation rates at low field (0.33 T in our case) preserving the resolution and sensitivity typical for high-field NMR spectroscopy. Radiofrequency pulses applied on six different radiofrequency channels are used to manipulate the spin system at both fields. The experiment was demonstrated on the C-terminal domain of [Formula see text] subunit of RNA polymerase from Bacillus subtilis, a protein with highly repetitive amino-acid sequence and very low dispersion of backbone chemical shifts.
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Texto completo: 1 Bases de dados: MEDLINE Assunto principal: Bacillus subtilis / Proteínas de Bactérias / RNA Polimerases Dirigidas por DNA / Ressonância Magnética Nuclear Biomolecular / Proteínas Intrinsicamente Desordenadas Idioma: En Revista: J Biomol NMR Assunto da revista: BIOLOGIA MOLECULAR / DIAGNOSTICO POR IMAGEM / MEDICINA NUCLEAR Ano de publicação: 2020 Tipo de documento: Article País de afiliação: República Tcheca

Texto completo: 1 Bases de dados: MEDLINE Assunto principal: Bacillus subtilis / Proteínas de Bactérias / RNA Polimerases Dirigidas por DNA / Ressonância Magnética Nuclear Biomolecular / Proteínas Intrinsicamente Desordenadas Idioma: En Revista: J Biomol NMR Assunto da revista: BIOLOGIA MOLECULAR / DIAGNOSTICO POR IMAGEM / MEDICINA NUCLEAR Ano de publicação: 2020 Tipo de documento: Article País de afiliação: República Tcheca