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Macromolecular modeling and design in Rosetta: recent methods and frameworks.
Leman, Julia Koehler; Weitzner, Brian D; Lewis, Steven M; Adolf-Bryfogle, Jared; Alam, Nawsad; Alford, Rebecca F; Aprahamian, Melanie; Baker, David; Barlow, Kyle A; Barth, Patrick; Basanta, Benjamin; Bender, Brian J; Blacklock, Kristin; Bonet, Jaume; Boyken, Scott E; Bradley, Phil; Bystroff, Chris; Conway, Patrick; Cooper, Seth; Correia, Bruno E; Coventry, Brian; Das, Rhiju; De Jong, René M; DiMaio, Frank; Dsilva, Lorna; Dunbrack, Roland; Ford, Alexander S; Frenz, Brandon; Fu, Darwin Y; Geniesse, Caleb; Goldschmidt, Lukasz; Gowthaman, Ragul; Gray, Jeffrey J; Gront, Dominik; Guffy, Sharon; Horowitz, Scott; Huang, Po-Ssu; Huber, Thomas; Jacobs, Tim M; Jeliazkov, Jeliazko R; Johnson, David K; Kappel, Kalli; Karanicolas, John; Khakzad, Hamed; Khar, Karen R; Khare, Sagar D; Khatib, Firas; Khramushin, Alisa; King, Indigo C; Kleffner, Robert.
Afiliação
  • Leman JK; Center for Computational Biology, Flatiron Institute, Simons Foundation, New York, NY, USA. Julia.koehler.leman@nyu.edu.
  • Weitzner BD; Department of Biology, New York University, New York, New York, USA. Julia.koehler.leman@nyu.edu.
  • Lewis SM; Department of Chemical and Biomolecular Engineering, Johns Hopkins University, Baltimore, MD, USA.
  • Adolf-Bryfogle J; Department of Biochemistry, University of Washington, Seattle, WA, USA.
  • Alam N; Institute for Protein Design, University of Washington, Seattle, WA, USA.
  • Alford RF; Lyell Immunopharma Inc., Seattle, WA, USA.
  • Aprahamian M; Department of Biochemistry and Biophysics, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA.
  • Baker D; Department of Biochemistry, Duke University, Durham, NC, USA.
  • Barlow KA; Cyrus Biotechnology, Seattle, WA, USA.
  • Barth P; Department of Immunology and Microbiology, The Scripps Research Institute, La Jolla, CA, USA.
  • Basanta B; Department of Microbiology and Molecular Genetics, IMRIC, Ein Kerem Faculty of Medicine, Hebrew University of Jerusalem, Jerusalem, Israel.
  • Bender BJ; Department of Chemical and Biomolecular Engineering, Johns Hopkins University, Baltimore, MD, USA.
  • Blacklock K; Department of Chemistry and Biochemistry, Ohio State University, Columbus, OH, USA.
  • Bonet J; Department of Biochemistry, University of Washington, Seattle, WA, USA.
  • Boyken SE; Institute for Protein Design, University of Washington, Seattle, WA, USA.
  • Bradley P; Graduate Program in Bioinformatics, University of California San Francisco, San Francisco, CA, USA.
  • Bystroff C; Institute of Bioengineering, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.
  • Conway P; Baylor College of Medicine, Department of Pharmacology, Houston, TX, USA.
  • Cooper S; Department of Biochemistry, University of Washington, Seattle, WA, USA.
  • Correia BE; Biological Physics Structure and Design PhD Program, University of Washington, Seattle, WA, USA.
  • Coventry B; Department of Pharmacology, Vanderbilt University, Nashville, TN, USA.
  • Das R; Institute of Quantitative Biomedicine, Rutgers, The State University of New Jersey, Piscataway, NJ, USA.
  • De Jong RM; Institute of Bioengineering, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.
  • DiMaio F; Swiss Institute of Bioinformatics, Lausanne, Switzerland.
  • Dsilva L; Institute for Protein Design, University of Washington, Seattle, WA, USA.
  • Dunbrack R; Lyell Immunopharma Inc., Seattle, WA, USA.
  • Ford AS; Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
  • Frenz B; Department of Biological Sciences, Rensselaer Polytechnic Institute, Troy, NY, USA.
  • Fu DY; Department of Biochemistry, University of Washington, Seattle, WA, USA.
  • Geniesse C; Khoury College of Computer Sciences, Northeastern University, Boston, MA, USA.
  • Goldschmidt L; Institute of Bioengineering, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.
  • Gowthaman R; Swiss Institute of Bioinformatics, Lausanne, Switzerland.
  • Gray JJ; Department of Biochemistry, University of Washington, Seattle, WA, USA.
  • Gront D; Department of Biochemistry, Stanford University School of Medicine, Stanford, CA, USA.
  • Guffy S; DSM Biotechnology Center, Delft, the Netherlands.
  • Horowitz S; Department of Biochemistry, University of Washington, Seattle, WA, USA.
  • Huang PS; Institute for Protein Design, University of Washington, Seattle, WA, USA.
  • Huber T; Khoury College of Computer Sciences, Northeastern University, Boston, MA, USA.
  • Jacobs TM; Institute for Cancer Research, Fox Chase Cancer Center, Philadelphia, PA, USA.
  • Jeliazkov JR; Department of Biochemistry, University of Washington, Seattle, WA, USA.
  • Johnson DK; Institute for Protein Design, University of Washington, Seattle, WA, USA.
  • Kappel K; Cyrus Biotechnology, Seattle, WA, USA.
  • Karanicolas J; Department of Chemistry, Vanderbilt University, Nashville, TN, USA.
  • Khakzad H; Department of Biochemistry, Stanford University School of Medicine, Stanford, CA, USA.
  • Khar KR; Department of Biochemistry, University of Washington, Seattle, WA, USA.
  • Khare SD; University of Maryland Institute for Bioscience and Biotechnology Research, Rockville, MD, USA.
  • Khatib F; Department of Cell Biology and Molecular Genetics, University of Maryland, College Park, MD, USA.
  • Khramushin A; Department of Chemical and Biomolecular Engineering, Johns Hopkins University, Baltimore, MD, USA.
  • King IC; Program in Molecular Biophysics, Johns Hopkins University, Baltimore, MD, USA.
  • Kleffner R; Faculty of Chemistry, Biological and Chemical Research Centre, University of Warsaw, Warsaw, Poland.
Nat Methods ; 17(7): 665-680, 2020 07.
Article em En | MEDLINE | ID: mdl-32483333
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Texto completo: 1 Bases de dados: MEDLINE Assunto principal: Software / Proteínas / Modelos Moleculares / Substâncias Macromoleculares Tipo de estudo: Prognostic_studies Idioma: En Revista: Nat Methods Assunto da revista: TECNICAS E PROCEDIMENTOS DE LABORATORIO Ano de publicação: 2020 Tipo de documento: Article País de afiliação: Estados Unidos
Texto completo
Adicionar na Minha BVS
Imprimir
XML
PubMed Links
Buscar no Google

Texto completo: 1 Bases de dados: MEDLINE Assunto principal: Software / Proteínas / Modelos Moleculares / Substâncias Macromoleculares Tipo de estudo: Prognostic_studies Idioma: En Revista: Nat Methods Assunto da revista: TECNICAS E PROCEDIMENTOS DE LABORATORIO Ano de publicação: 2020 Tipo de documento: Article País de afiliação: Estados Unidos