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Comparative validation of multi-instance instrument segmentation in endoscopy: Results of the ROBUST-MIS 2019 challenge.
Roß, Tobias; Reinke, Annika; Full, Peter M; Wagner, Martin; Kenngott, Hannes; Apitz, Martin; Hempe, Hellena; Mindroc-Filimon, Diana; Scholz, Patrick; Tran, Thuy Nuong; Bruno, Pierangela; Arbeláez, Pablo; Bian, Gui-Bin; Bodenstedt, Sebastian; Bolmgren, Jon Lindström; Bravo-Sánchez, Laura; Chen, Hua-Bin; González, Cristina; Guo, Dong; Halvorsen, Pål; Heng, Pheng-Ann; Hosgor, Enes; Hou, Zeng-Guang; Isensee, Fabian; Jha, Debesh; Jiang, Tingting; Jin, Yueming; Kirtac, Kadir; Kletz, Sabrina; Leger, Stefan; Li, Zhixuan; Maier-Hein, Klaus H; Ni, Zhen-Liang; Riegler, Michael A; Schoeffmann, Klaus; Shi, Ruohua; Speidel, Stefanie; Stenzel, Michael; Twick, Isabell; Wang, Gutai; Wang, Jiacheng; Wang, Liansheng; Wang, Lu; Zhang, Yujie; Zhou, Yan-Jie; Zhu, Lei; Wiesenfarth, Manuel; Kopp-Schneider, Annette; Müller-Stich, Beat P; Maier-Hein, Lena.
Afiliação
  • Roß T; Computer Assisted Medical Interventions (CAMI), German Cancer Research Center, Im Neuenheimer Feld 223, 69120, Heidelberg, Germany; University of Heidelberg, Germany, Seminarstraße 2, 69117 Heidelberg, Germany. Electronic address: t.ross@dkfz-heidelberg.de.
  • Reinke A; Computer Assisted Medical Interventions (CAMI), German Cancer Research Center, Im Neuenheimer Feld 223, 69120, Heidelberg, Germany; University of Heidelberg, Germany, Seminarstraße 2, 69117 Heidelberg, Germany.
  • Full PM; University of Heidelberg, Germany, Seminarstraße 2, 69117 Heidelberg, Germany; Division of Medical Image Computing (MIC), Im Neuenheimer Feld 223, 69120 Heidelberg, Germany.
  • Wagner M; Department for General, Visceral and Transplantation Surgery, Heidelberg University Hospital, Im Neuenheimer Feld 110, 69120 Heidelberg, Germany.
  • Kenngott H; Department for General, Visceral and Transplantation Surgery, Heidelberg University Hospital, Im Neuenheimer Feld 110, 69120 Heidelberg, Germany.
  • Apitz M; Department for General, Visceral and Transplantation Surgery, Heidelberg University Hospital, Im Neuenheimer Feld 110, 69120 Heidelberg, Germany.
  • Hempe H; Computer Assisted Medical Interventions (CAMI), German Cancer Research Center, Im Neuenheimer Feld 223, 69120, Heidelberg, Germany.
  • Mindroc-Filimon D; Computer Assisted Medical Interventions (CAMI), German Cancer Research Center, Im Neuenheimer Feld 223, 69120, Heidelberg, Germany.
  • Scholz P; Computer Assisted Medical Interventions (CAMI), German Cancer Research Center, Im Neuenheimer Feld 223, 69120, Heidelberg, Germany; HIDSS4Health - Helmholtz Information and Data Science School for Health, Im Neuenheimer Feld 223, 69120 Heidelberg, Germany.
  • Tran TN; Computer Assisted Medical Interventions (CAMI), German Cancer Research Center, Im Neuenheimer Feld 223, 69120, Heidelberg, Germany.
  • Bruno P; Computer Assisted Medical Interventions (CAMI), German Cancer Research Center, Im Neuenheimer Feld 223, 69120, Heidelberg, Germany; Department of Mathematics and Computer Science, University of Calabria, 87036 Rende, Italy.
  • Arbeláez P; Universidad de los Andes, Cra. 1 No 18A - 12, 111711 Bogotá, Colombia.
  • Bian GB; University of Chinese Academy Sciences, 52 Sanlihe Rd., Beijing, China; State Key Laboratory of Management and Control for Complex Systems, Institute of Automation, Chinese Academy of Sciences, 100864 Beijing, China.
  • Bodenstedt S; National Center for Tumor Diseases (NCT), Partner Site Dresden, Germany: German Cancer Research Center, Im Neuenheimer Feld 460, 69120 Heidelberg, Germany; Faculty of Medicine and University Hospital Carl Gustav Carus, Technische Universität Dresden, Fetscherstraße 74, 01307 Dresden, Germany; Helmho
  • Bolmgren JL; caresyntax, Komturstraße 18A, 12099 Berlin, Germany.
  • Bravo-Sánchez L; Universidad de los Andes, Cra. 1 No 18A - 12, 111711 Bogotá, Colombia.
  • Chen HB; University of Chinese Academy Sciences, 52 Sanlihe Rd., Beijing, China; State Key Laboratory of Management and Control for Complex Systems, Institute of Automation, Chinese Academy of Sciences, 100864 Beijing, China.
  • González C; Universidad de los Andes, Cra. 1 No 18A - 12, 111711 Bogotá, Colombia.
  • Guo D; School of Mechanical and Electrical Engineering, University of Electronic Science and Technology of China, Shahe Campus:No.4, Section 2, North Jianshe Road, 610054 | Qingshuihe Campus:No.2006, Xiyuan Ave, West Hi-Tech Zone, 611731, Chengdu, China.
  • Halvorsen P; SimulaMet, Pilestredet 52, 0167 Oslo, Norway; Oslo Metropolitan University (OsloMet), Pilestredet 52, 0167 Oslo, Norway.
  • Heng PA; Department of Computer Science and Engineering, The Chinese University of Hong Kong, Chung Chi Rd, Ma Liu Shui, Hong Kong, China.
  • Hosgor E; caresyntax, Komturstraße 18A, 12099 Berlin, Germany.
  • Hou ZG; University of Chinese Academy Sciences, 52 Sanlihe Rd., Beijing, China; State Key Laboratory of Management and Control for Complex Systems, Institute of Automation, Chinese Academy of Sciences, 100864 Beijing, China.
  • Isensee F; University of Heidelberg, Germany, Seminarstraße 2, 69117 Heidelberg, Germany; Division of Medical Image Computing (MIC), Im Neuenheimer Feld 223, 69120 Heidelberg, Germany.
  • Jha D; SimulaMet, Pilestredet 52, 0167 Oslo, Norway; Department of Informatics, UIT The Arctic University of Norway, Hansine Hansens vei 54, 9037 Tromsø, Norway.
  • Jiang T; Institute of Digital Media (NELVT), Peking University, 5 Yiheyuan Rd, Haidian District, 100871 Peking, China.
  • Jin Y; Department of Computer Science and Engineering, The Chinese University of Hong Kong, Chung Chi Rd, Ma Liu Shui, Hong Kong, China.
  • Kirtac K; caresyntax, Komturstraße 18A, 12099 Berlin, Germany.
  • Kletz S; Institute of Information Technology, Klagenfurt University, Universitätsstraße 65-67, 9020 Klagenfurt, Austria.
  • Leger S; National Center for Tumor Diseases (NCT), Partner Site Dresden, Germany: German Cancer Research Center, Im Neuenheimer Feld 460, 69120 Heidelberg, Germany; Faculty of Medicine and University Hospital Carl Gustav Carus, Technische Universität Dresden, Fetscherstraße 74, 01307 Dresden, Germany; Helmho
  • Li Z; Institute of Digital Media (NELVT), Peking University, 5 Yiheyuan Rd, Haidian District, 100871 Peking, China.
  • Maier-Hein KH; Division of Medical Image Computing (MIC), Im Neuenheimer Feld 223, 69120 Heidelberg, Germany.
  • Ni ZL; University of Chinese Academy Sciences, 52 Sanlihe Rd., Beijing, China; State Key Laboratory of Management and Control for Complex Systems, Institute of Automation, Chinese Academy of Sciences, 100864 Beijing, China.
  • Riegler MA; SimulaMet, Pilestredet 52, 0167 Oslo, Norway.
  • Schoeffmann K; Institute of Information Technology, Klagenfurt University, Universitätsstraße 65-67, 9020 Klagenfurt, Austria.
  • Shi R; Institute of Digital Media (NELVT), Peking University, 5 Yiheyuan Rd, Haidian District, 100871 Peking, China.
  • Speidel S; National Center for Tumor Diseases (NCT), Partner Site Dresden, Germany: German Cancer Research Center, Im Neuenheimer Feld 460, 69120 Heidelberg, Germany; Faculty of Medicine and University Hospital Carl Gustav Carus, Technische Universität Dresden, Fetscherstraße 74, 01307 Dresden, Germany; Helmho
  • Stenzel M; caresyntax, Komturstraße 18A, 12099 Berlin, Germany.
  • Twick I; caresyntax, Komturstraße 18A, 12099 Berlin, Germany.
  • Wang G; School of Mechanical and Electrical Engineering, University of Electronic Science and Technology of China, Shahe Campus:No.4, Section 2, North Jianshe Road, 610054 | Qingshuihe Campus:No.2006, Xiyuan Ave, West Hi-Tech Zone, 611731, Chengdu, China.
  • Wang J; Department of Computer Science, School of Informatics, Xiamen University, 422 Siming South Road, 361005 Xiamen, China.
  • Wang L; Department of Computer Science, School of Informatics, Xiamen University, 422 Siming South Road, 361005 Xiamen, China.
  • Wang L; School of Mechanical and Electrical Engineering, University of Electronic Science and Technology of China, Shahe Campus:No.4, Section 2, North Jianshe Road, 610054 | Qingshuihe Campus:No.2006, Xiyuan Ave, West Hi-Tech Zone, 611731, Chengdu, China.
  • Zhang Y; Department of Computer Science, School of Informatics, Xiamen University, 422 Siming South Road, 361005 Xiamen, China.
  • Zhou YJ; University of Chinese Academy Sciences, 52 Sanlihe Rd., Beijing, China; State Key Laboratory of Management and Control for Complex Systems, Institute of Automation, Chinese Academy of Sciences, 100864 Beijing, China.
  • Zhu L; Department of Computer Science and Engineering, The Chinese University of Hong Kong, Chung Chi Rd, Ma Liu Shui, Hong Kong, China.
  • Wiesenfarth M; Division of Biostatistics, German Cancer Research Center, Im Neuenheimer Feld 581, Heidelberg, Germany.
  • Kopp-Schneider A; Division of Biostatistics, German Cancer Research Center, Im Neuenheimer Feld 581, Heidelberg, Germany.
  • Müller-Stich BP; Department for General, Visceral and Transplantation Surgery, Heidelberg University Hospital, Im Neuenheimer Feld 110, 69120 Heidelberg, Germany.
  • Maier-Hein L; Computer Assisted Medical Interventions (CAMI), German Cancer Research Center, Im Neuenheimer Feld 223, 69120, Heidelberg, Germany.
Med Image Anal ; 70: 101920, 2021 05.
Article em En | MEDLINE | ID: mdl-33676097
ABSTRACT
Intraoperative tracking of laparoscopic instruments is often a prerequisite for computer and robotic-assisted interventions. While numerous methods for detecting, segmenting and tracking of medical instruments based on endoscopic video images have been proposed in the literature, key limitations remain to be addressed Firstly, robustness, that is, the reliable performance of state-of-the-art methods when run on challenging images (e.g. in the presence of blood, smoke or motion artifacts). Secondly, generalization; algorithms trained for a specific intervention in a specific hospital should generalize to other interventions or institutions. In an effort to promote solutions for these limitations, we organized the Robust Medical Instrument Segmentation (ROBUST-MIS) challenge as an international benchmarking competition with a specific focus on the robustness and generalization capabilities of algorithms. For the first time in the field of endoscopic image processing, our challenge included a task on binary segmentation and also addressed multi-instance detection and segmentation. The challenge was based on a surgical data set comprising 10,040 annotated images acquired from a total of 30 surgical procedures from three different types of surgery. The validation of the competing methods for the three tasks (binary segmentation, multi-instance detection and multi-instance segmentation) was performed in three different stages with an increasing domain gap between the training and the test data. The results confirm the initial hypothesis, namely that algorithm performance degrades with an increasing domain gap. While the average detection and segmentation quality of the best-performing algorithms is high, future research should concentrate on detection and segmentation of small, crossing, moving and transparent instrument(s) (parts).
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Texto completo: 1 Bases de dados: MEDLINE Assunto principal: Processamento de Imagem Assistida por Computador / Laparoscopia Idioma: En Revista: Med Image Anal Assunto da revista: DIAGNOSTICO POR IMAGEM Ano de publicação: 2021 Tipo de documento: Article

Texto completo: 1 Bases de dados: MEDLINE Assunto principal: Processamento de Imagem Assistida por Computador / Laparoscopia Idioma: En Revista: Med Image Anal Assunto da revista: DIAGNOSTICO POR IMAGEM Ano de publicação: 2021 Tipo de documento: Article