cellmlmanip and chaste_codegen: automatic CellML to C++ code generation with fixes for singularities and automatically generated Jacobians.

Hendrix, Maurice; Clerx, Michael; Tamuri, Asif U; Keating, Sarah M; Johnstone, Ross H; Cooper, Jonathan; Mirams, Gary R

Hendrix, Maurice; Clerx, Michael; Tamuri, Asif U; Keating, Sarah M; Johnstone, Ross H; Cooper, Jonathan; Mirams, Gary R.

Afiliação

Hendrix M; Centre for Mathematical Medicine & Biology, University of Nottingham, Nottingham, UK.
Clerx M; Digital Research Service, School of Mathematical Sciences, University of Nottingham, Nottingham, NG8 1BB, UK.
Tamuri AU; Centre for Mathematical Medicine & Biology, University of Nottingham, Nottingham, UK.
Keating SM; Centre for Advanced Research Computing, University College London, London, WC1E 6BT, UK.
Johnstone RH; Centre for Advanced Research Computing, University College London, London, WC1E 6BT, UK.
Cooper J; Computational Biology & Healthcare Informatics, Department of Computer Science, University of Oxford, Oxford, OX1 3QD, UK.
Mirams GR; Centre for Advanced Research Computing, University College London, London, WC1E 6BT, UK.

Wellcome Open Res ; 6: 261, 2021.

Article em En | MEDLINE | ID: mdl-35299708

Palavras-chave

C++; CellML; GHK equation; cardiac electrophysiology; code generation; jacobian; singularity

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Texto completo: 1 Bases de dados: MEDLINE Idioma: En Revista: Wellcome Open Res Ano de publicação: 2021 Tipo de documento: Article País de afiliação: Reino Unido