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A Large Open Access Dataset of Brain Metastasis 3D Segmentations with Clinical and Imaging Feature Information.
Ramakrishnan, Divya; Jekel, Leon; Chadha, Saahil; Janas, Anastasia; Moy, Harrison; Maleki, Nazanin; Sala, Matthew; Kaur, Manpreet; Petersen, Gabriel Cassinelli; Merkaj, Sara; von Reppert, Marc; Baid, Ujjwal; Bakas, Spyridon; Kirsch, Claudia; Davis, Melissa; Bousabarah, Khaled; Holler, Wolfgang; Lin, MingDe; Westerhoff, Malte; Aneja, Sanjay; Memon, Fatima; Aboian, Mariam S.
Afiliação
  • Ramakrishnan D; Yale School of Medicine, Department of Radiology and Biomedical Imaging, New Haven, CT, USA.
  • Jekel L; Yale School of Medicine, Department of Radiology and Biomedical Imaging, New Haven, CT, USA.
  • Chadha S; University of Essen School of Medicine, Essen, Germany.
  • Janas A; Yale School of Medicine, Department of Radiology and Biomedical Imaging, New Haven, CT, USA.
  • Moy H; Yale School of Medicine, Department of Radiology and Biomedical Imaging, New Haven, CT, USA.
  • Maleki N; Charité University School of Medicine, Berlin, Germany.
  • Sala M; Yale School of Medicine, Department of Radiology and Biomedical Imaging, New Haven, CT, USA.
  • Kaur M; Wesleyan University, Middletown, CT, USA.
  • Petersen GC; Yale School of Medicine, Department of Radiology and Biomedical Imaging, New Haven, CT, USA.
  • Merkaj S; Yale School of Medicine, Department of Radiology and Biomedical Imaging, New Haven, CT, USA.
  • von Reppert M; Tulane University School of Medicine, New Orleans, LA, USA.
  • Baid U; Yale School of Medicine, Department of Radiology and Biomedical Imaging, New Haven, CT, USA.
  • Bakas S; Ludwig Maximilian University School of Medicine, Munich, Germany.
  • Kirsch C; Yale School of Medicine, Department of Radiology and Biomedical Imaging, New Haven, CT, USA.
  • Davis M; University of Göttingen School of Medicine, Göttingen, Germany.
  • Bousabarah K; Yale School of Medicine, Department of Radiology and Biomedical Imaging, New Haven, CT, USA.
  • Holler W; Ulm University School of Medicine, Ulm, Germany.
  • Lin M; Yale School of Medicine, Department of Radiology and Biomedical Imaging, New Haven, CT, USA.
  • Westerhoff M; University of Leipzig School of Medicine, Leipzig, Germany.
  • Aneja S; Division of Computational Pathology, Department of Pathology & Laboratory Medicine, Indiana University School of Medicine, Indianapolis, IN, USA.
  • Memon F; Department of Radiology and Department of Pathology & Laboratory Medicine, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA.
  • Aboian MS; Division of Computational Pathology, Department of Pathology & Laboratory Medicine, Indiana University School of Medicine, Indianapolis, IN, USA.
ArXiv ; 2023 Sep 12.
Article em En | MEDLINE | ID: mdl-37744461
Resection and whole brain radiotherapy (WBRT) are the standards of care for the treatment of patients with brain metastases (BM) but are often associated with cognitive side effects. Stereotactic radiosurgery (SRS) involves a more targeted treatment approach and has been shown to avoid the side effects associated with WBRT. However, SRS requires precise identification and delineation of BM. While many AI algorithms have been developed for this purpose, their clinical adoption has been limited due to poor model performance in the clinical setting. Major reasons for non-generalizable algorithms are the limitations in the datasets used for training the AI network. The purpose of this study was to create a large, heterogenous, annotated BM dataset for training and validation of AI models to improve generalizability. We present a BM dataset of 200 patients with pretreatment T1, T1 post-contrast, T2, and FLAIR MR images. The dataset includes contrast-enhancing and necrotic 3D segmentations on T1 post-contrast and whole tumor (including peritumoral edema) 3D segmentations on FLAIR. Our dataset contains 975 contrast-enhancing lesions, many of which are sub centimeter, along with clinical and imaging feature information. We used a streamlined approach to database-building leveraging a PACS-integrated segmentation workflow.

Texto completo: 1 Bases de dados: MEDLINE Tipo de estudo: Guideline Idioma: En Revista: ArXiv Ano de publicação: 2023 Tipo de documento: Article País de afiliação: Estados Unidos

Texto completo: 1 Bases de dados: MEDLINE Tipo de estudo: Guideline Idioma: En Revista: ArXiv Ano de publicação: 2023 Tipo de documento: Article País de afiliação: Estados Unidos