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OMICmAge: An integrative multi-omics approach to quantify biological age with electronic medical records.
Chen, Qingwen; Dwaraka, Varun B; Carreras-Gallo, Natàlia; Mendez, Kevin; Chen, Yulu; Begum, Sofina; Kachroo, Priyadarshini; Prince, Nicole; Went, Hannah; Mendez, Tavis; Lin, Aaron; Turner, Logan; Moqri, Mahdi; Chu, Su H; Kelly, Rachel S; Weiss, Scott T; Rattray, Nicholas J W; Gladyshev, Vadim N; Karlson, Elizabeth; Wheelock, Craig; Mathé, Ewy A; Dahlin, Amber; McGeachie, Michae J; Smith, Ryan; Lasky-Su, Jessica A.
Afiliação
  • Chen Q; Channing Division of Network Medicine, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA, USA.
  • Dwaraka VB; TruDiagnostic, Inc., Lexington, KY USA.
  • Carreras-Gallo N; TruDiagnostic, Inc., Lexington, KY USA.
  • Mendez K; Channing Division of Network Medicine, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA, USA.
  • Chen Y; Channing Division of Network Medicine, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA, USA.
  • Begum S; Channing Division of Network Medicine, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA, USA.
  • Kachroo P; Channing Division of Network Medicine, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA, USA.
  • Prince N; Channing Division of Network Medicine, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA, USA.
  • Went H; TruDiagnostic, Inc., Lexington, KY USA.
  • Mendez T; TruDiagnostic, Inc., Lexington, KY USA.
  • Lin A; TruDiagnostic, Inc., Lexington, KY USA.
  • Turner L; TruDiagnostic, Inc., Lexington, KY USA.
  • Moqri M; Division of Genetics, Dept. of Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA.
  • Chu SH; Department of Genetics, School of Medicine, Stanford University, Stanford, CA, USA.
  • Kelly RS; Channing Division of Network Medicine, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA, USA.
  • Weiss ST; Channing Division of Network Medicine, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA, USA.
  • Rattray NJW; Channing Division of Network Medicine, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA, USA.
  • Gladyshev VN; Strathclyde Institute of Pharmacy and Biomedical Sciences, University of Strathclyde, Glasgow, UK.
  • Karlson E; Strathclyde Centre for Molecular Bioscience, University of Strathclyde, Glasgow, UK.
  • Wheelock C; Division of Genetics, Dept. of Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA.
  • Mathé EA; Department of Personalized Medicine, Mass General Brigham and Harvard Medical School, Boston, MA, USA.
  • Dahlin A; Division of Physiological Chemistry 2, Dept of Medical Biochemistry and Biophysics, Karolinska Institute, Stockholm, Sweden.
  • McGeachie MJ; Division of Preclinical Innovation, National Center for Advancing Translational Science, National Institutes of Health, Rockville, MD, USA.
  • Smith R; Channing Division of Network Medicine, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA, USA.
  • Lasky-Su JA; Channing Division of Network Medicine, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA, USA.
bioRxiv ; 2023 Oct 24.
Article em En | MEDLINE | ID: mdl-37904959
Biological aging is a multifactorial process involving complex interactions of cellular and biochemical processes that is reflected in omic profiles. Using common clinical laboratory measures in ~30,000 individuals from the MGB-Biobank, we developed a robust, predictive biological aging phenotype, EMRAge, that balances clinical biomarkers with overall mortality risk and can be broadly recapitulated across EMRs. We then applied elastic-net regression to model EMRAge with DNA-methylation (DNAm) and multiple omics, generating DNAmEMRAge and OMICmAge, respectively. Both biomarkers demonstrated strong associations with chronic diseases and mortality that outperform current biomarkers across our discovery (MGB-ABC, n=3,451) and validation (TruDiagnostic, n=12,666) cohorts. Through the use of epigenetic biomarker proxies, OMICmAge has the unique advantage of expanding the predictive search space to include epigenomic, proteomic, metabolomic, and clinical data while distilling this in a measure with DNAm alone, providing opportunities to identify clinically-relevant interconnections central to the aging process.
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Texto completo: 1 Bases de dados: MEDLINE Idioma: En Revista: BioRxiv Ano de publicação: 2023 Tipo de documento: Article País de afiliação: Estados Unidos

Texto completo: 1 Bases de dados: MEDLINE Idioma: En Revista: BioRxiv Ano de publicação: 2023 Tipo de documento: Article País de afiliação: Estados Unidos