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Exploring the evolutionary and pathogenic role of Acinetobacter baumannii biofilm-associated protein (Bap) through in silico structural modeling.
Upmanyu, Kirti; Kumar, Rakesh; Rizwanul Haque, Qazi Mohd; Singh, Ruchi.
Afiliação
  • Upmanyu K; ICMR-National Institute of Pathology, Safdarjung Hospital Campus, New Delhi, 110029, India.
  • Kumar R; Department of Biosciences, Jamia Millia Islamia, New Delhi, India.
  • Rizwanul Haque QM; ICMR-National Institute of Pathology, Safdarjung Hospital Campus, New Delhi, 110029, India.
  • Singh R; Department of Biosciences, Jamia Millia Islamia, New Delhi, India.
Arch Microbiol ; 206(6): 267, 2024 May 18.
Article em En | MEDLINE | ID: mdl-38762620
ABSTRACT
Acinetobacter species encode for extracellularly secreted Biofilm-associated protein (Bap), a multi-domain protein with variable molecular weights reaching several hundred kilodaltons. Bap is crucial for the development of multi-dimensional structures of mature biofilms. In our investigation, we analyzed 7338 sequences of A. baumannii from the NCBI database and found that Bap or Bap-like protein (BLP) was present in 6422 (87.52%) isolates. Further classification revealed that 12.12% carried Type-1 Bap, 68.44% had Type-2, 6.91% had Type-3, 0.05% had Type-6 or SDF-Type, and 12.51% lacked Bap or BLP. The majority of isolates with Type-1, Type-2, and Type-3 Bap belonged to ST1, ST2, and ST25, respectively. Phylogenetic analysis suggested that Type-1 Bap is the most ancient, while Type-3 and SDF-Type have evolved recently. Studying the interaction of predicted Bap structures with human CEACAM-1 and PIgR showed that Bap with its BIg13 and BIg6 domains interact with the N-terminal domain of CEACAM-1, involving Arg43 and Glu40, involved in CEACAM-1 dimerization. Also, we found that recently evolved Type-3 and SDF-Type Bap showed greater interaction with CEACAM-1 and PIgR. It can be asserted that the evolution of Bap has conferred enhanced virulence characteristics to A. baumannii with increased interaction with CEACAM-1 and PIgR. Using in silico approaches, this study explores the evolutionary, physicochemical, and structural features of A. baumannii Bap and unravels its crucial role in mediating interaction with human CEACAM-1 and PIgR through detailed structure modelling. These findings advance our understanding of A. baumannii Bap and highlight its role in pathogenesis.
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Texto completo: 1 Bases de dados: MEDLINE Assunto principal: Filogenia / Proteínas de Bactérias / Biofilmes / Acinetobacter baumannii Limite: Humans Idioma: En Revista: Arch Microbiol Ano de publicação: 2024 Tipo de documento: Article País de afiliação: Índia

Texto completo: 1 Bases de dados: MEDLINE Assunto principal: Filogenia / Proteínas de Bactérias / Biofilmes / Acinetobacter baumannii Limite: Humans Idioma: En Revista: Arch Microbiol Ano de publicação: 2024 Tipo de documento: Article País de afiliação: Índia