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1.
Arch Microbiol ; 206(2): 57, 2024 Jan 08.
Artigo em Inglês | MEDLINE | ID: mdl-38189992

RESUMO

In hospital environments, droplets generated by urination within shared toilets may represent a route of dissemination for bacteria such as vancomycin-resistant Enterococcus faecium (VREfm), which contributes significantly to the burden of hospital-acquired infections. We investigated the potential activity of a foam in preventing the generation of droplets containing Enterococcus spp. during urination. A uniform layer of foam was deposited in the inner walls and at the bottom of an experimental toilet contaminated with suspensions of Enterococcus strains (including a VREfm strain). Human urination was simulated, and colonies of Enterococcus were recovered through a toilet lid where agar plates had been placed. Results showed that the foam was able to suppress production of droplets containing Enterococcus spp. generated by a liquid hitting inner toilet walls. Conversely, Enterococcus colonies were recovered in absence of foam. Moreover, the foam did not show antibacterial activity. We propose a new non-antimicrobial approach aimed at limiting transmission of multidrug-resistant bacteria, particularly in healthcare settings.


Assuntos
Aparelho Sanitário , Enterococcus faecium , Enterococos Resistentes à Vancomicina , Humanos , Vancomicina/farmacologia , Ágar
2.
Microb Pathog ; 185: 106377, 2023 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-37839760

RESUMO

The prevalence of Blastocystis sp., its genetic diversity and the distribution of circulating subtypes (STs) were molecularly investigated in a cohort of autochthonous and immigrant patients with gastrointestinal symptoms hospitalized over the period February 2022-June 2023 at the Policlinico Ospedaliero-Universitario "Riuniti", Foggia, in Southern Italy. The population variables, including patient geographical origin, gender and age classes were reported. Out of the 927 investigated patients, 36 (3.9%) were positive for Blastocystis sp. A statistically significant association with African origin and age classes >18 years old was found. ST1 (allele 4), ST2 (alleles 9, 13), ST3 (alleles 34, 36) and ST4 (allele 92) were the subtypes detected with a different distribution between autochthonous and immigrant patients. Co-infections with enteric protozoa such as Giardia duodenalis and Dientamoeba fragilis, pathogenic bacteria as Clostridioides difficile, Campylobacter jejuni and Aeromonas sp. and viral infections such as Norovirus were found in 33% of cases. This is the first study of Blastocystis sp., its circulating subtypes and allele variability among patients with different geographical origin in an area of Southern Italy, in the Central Mediterranean, characterized by high immigrant pressure. These results provide baseline data to better investigate a potential interaction between Blastocystis sp. and other risk factors in patients with gastrointestinal symptoms.


Assuntos
Infecções por Blastocystis , Blastocystis , Emigrantes e Imigrantes , Humanos , Adolescente , Blastocystis/genética , Infecções por Blastocystis/epidemiologia , Infecções por Blastocystis/parasitologia , Prevalência , Variação Genética , Itália/epidemiologia , Fezes/parasitologia , Filogenia
3.
J Med Virol ; 93(3): 1739-1742, 2021 03.
Artigo em Inglês | MEDLINE | ID: mdl-32790086

RESUMO

Here we present results from a survey on anti-severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) seroprevalence in healthy blood donors from a low incidence coronavirus disease 2019 area (Apulia region, South Eastern Italy). Among 904 subjects tested, only in nine cases (0.99%) antibodies against SARS-CoV-2 were demonstrated. All the nine seropositive patients were negative for the research of viral RNA by reverse transcription polymerase chain reaction in nasopharyngeal swabs. These data, along with those recently reported from other countries, clearly show that we are very far from herd immunity and that the containment measures are at the moment the only realistic instrument we have to slow the spread of the pandemic.


Assuntos
COVID-19/imunologia , Imunidade Coletiva/imunologia , SARS-CoV-2/imunologia , Adolescente , Adulto , Idoso , Anticorpos Antivirais/imunologia , Doadores de Sangue , Feminino , Humanos , Itália , Masculino , Pessoa de Meia-Idade , Pandemias/prevenção & controle , RNA Viral/imunologia , Adulto Jovem
4.
Acta Haematol ; 144(5): 580-584, 2021.
Artigo em Inglês | MEDLINE | ID: mdl-33878755

RESUMO

Recently, a significant cluster of pneumonia caused by a novel betacoronavirus (severe acute respiratory syndrome coronavirus 2, SARS-CoV-2) was described initially in China and then spread throughout the world. Like other coronaviridae, the viral transmission occurs mainly through droplets. In addition, the virus has been detected in different clinical specimens, suggesting a potential transmission by other routes, including blood transfusion. However, the potential risk of transmission of SARS-CoV-2 via blood products is still unclear. The aim of our study was to investigate the prevalence of antibodies against SARS-CoV-2 among blood donors from South-Eastern Italy. Moreover, in the seropositive donors, we searched for the presence of the virus in nasopharyngeal swabs and in plasma samples. Overall, 1,797 blood donors from the Apulia region were tested for anti-SARS-CoV-2 antibodies, using a commercially available assay. Only 18/1,797 donors (1.0%) tested positive for anti-SARS-CoV-2 antibodies; in none of them SARS-CoV-2 viral RNA was detected in nasopharyngeal swabs and in plasma samples. Our results indicate that most of the blood donors in Apulia remained uninfected during this wave of the pandemic; further, none had detectable virus both in nasopharyngeal swabs and in blood samples. The risk to carry and transmit the virus by healthy and asymptomatic blood donors is probably very low.


Assuntos
Anticorpos Antivirais/sangue , Doadores de Sangue , COVID-19/patologia , SARS-CoV-2/imunologia , Adolescente , Adulto , Idoso , COVID-19/virologia , Feminino , Humanos , Itália , Masculino , Pessoa de Meia-Idade , Nasofaringe/virologia , RNA Viral/análise , RNA Viral/metabolismo , SARS-CoV-2/genética , SARS-CoV-2/isolamento & purificação , Carga Viral , Adulto Jovem
5.
Sensors (Basel) ; 21(11)2021 May 21.
Artigo em Inglês | MEDLINE | ID: mdl-34064147

RESUMO

This paper presents an in-depth overview of the Bluetooth 5.1 Direction Finding standard's potentials, thanks to enhancing the Bluetooth Low Energy (BLE) firmware. This improvement allows producers to create location applications based on the Angle of Departure (AoD) and the Angle of Arrival (AoA). Accordingly, it is conceivable to design proper Indoor Positioning Systems (IPS), for instance, for the traceability of resources, assets, and people. First of all, Radio Frequency (RF) radiogoniometry techniques, helpful in calculating AoA and AoD angles, are introduced in this paper. Subsequently, the topic relating to signal direction estimation is deepened. The Bluetooth Core Specification updates concerning version 5.1, both at the packet architecture and prototyping levels, are also reported. Some suitable platforms and development kits for running the new features are then presented, and some basic applications are illustrated. This paper's final part allows ascertaining the improvement made by this new definition of BLE and possible future developments, especially concerning applications related to devices, assets, or people's indoor localization. Some preliminary results gathered in a real evaluation scenario are also presented.

6.
Int J Mol Sci ; 22(3)2021 Jan 28.
Artigo em Inglês | MEDLINE | ID: mdl-33525651

RESUMO

Since early 2020, the COVID-19 pandemic has caused an excess in morbidity and mortality rates worldwide. Containment strategies rely firstly on rapid and sensitive laboratory diagnosis, with molecular detection of the viral genome in respiratory samples being the gold standard. The reliability of diagnostic protocols could be affected by SARS-CoV-2 genetic variability. In fact, mutations occurring during SARS-CoV-2 genomic evolution can involve the regions targeted by the diagnostic probes. Following a review of the literature and an in silico analysis of the most recently described virus variants (including the UK B 1.1.7 and the South Africa 501Y.V2 variants), we conclude that the described genetic variability should have minimal or no effect on the sensitivity of existing diagnostic protocols for SARS-CoV-2 genome detection. However, given the continuous emergence of new variants, the situation should be monitored in the future, and protocols including multiple targets should be preferred.


Assuntos
Teste para COVID-19/métodos , COVID-19/diagnóstico , SARS-CoV-2/isolamento & purificação , COVID-19/virologia , Genoma Viral , Humanos , Mutação , SARS-CoV-2/genética
7.
Sensors (Basel) ; 20(10)2020 May 25.
Artigo em Inglês | MEDLINE | ID: mdl-32466245

RESUMO

Unmanned aerial vehicles (UAVs) allow better coverage, enhanced connectivity, and elongated lifetime when used in telecommunications. However, these features are predominately affected by the policies used for sharing resources amongst the involved nodes. Moreover, the architecture and deployment strategies also have a considerable impact on their functionality. Recently, many researchers have suggested using layer-based UAV deployment, which allows better communications between the entities. Regardless of these solutions, there are a limited number of studies which focus on connecting layered-UAVs to everything (U2X). In particular, none of them have actually addressed the aspect of resource allocation. This paper considers the issue of resource allocation and helps decide the optimal number of transfers amongst the UAVs, which can conserve the maximum amount of energy while increasing the overall probability of resource allocation. The proposed approach relies on mutual-agreement based reward theory, which considers Minkowski distance as a decisive metric and helps attain efficient resource allocation for backhaul-aware U2X. The effectiveness of the proposed solution is demonstrated using Monte-Carlo simulations.

8.
J Antimicrob Chemother ; 74(12): 3453-3461, 2019 12 01.
Artigo em Inglês | MEDLINE | ID: mdl-31652323

RESUMO

OBJECTIVES: To determine the prevalence of Staphylococcus aureus from hospital-acquired pneumonia (HAP) in Italy and the susceptibility to ceftobiprole and comparators of MSSA and MRSA isolates. A secondary objective was to characterize the clonality and acquired resistance and virulence genes of MRSA. METHODS: Consecutive non-replicate isolates from HAP were collected from 13 laboratories distributed across Italy, from January to May 2016. Antimicrobial susceptibility testing was performed by broth microdilution, and results were interpreted according to the EUCAST breakpoints. All MRSA isolates were subjected to WGS using an Illumina platform. Clonality and resistance and virulence gene content were investigated with bioinformatics tools. RESULTS: Among 333 isolates from HAP, S. aureus was the third most common pathogen (18.6%). The proportion of MRSA was 40.3%. Susceptibility to ceftobiprole was 100% for MSSA and 95.5% for MRSA. Lower susceptibility rates of 78.4% and 94.6% in MSSA and 36.4% and 12.1% in MRSA isolates were observed for erythromycin and levofloxacin, respectively. The MRSA from HAP mostly belonged to clonal complex (CC) 22 (47.0%), CC5 (25.8%) and CC8 (15.2%), with a minority of other lineages (ST1, ST6, ST7, ST30, ST152 and ST398). Acquired resistance and virulence genes in most cases exhibited a clonal distribution. The three ceftobiprole-resistant isolates exhibited an MIC of 4 mg/L and belonged to ST228-MRSA-I of CC5. CONCLUSIONS: S. aureus is an important cause of HAP in Italy. Ceftobiprole exhibited good in vitro activity against S. aureus isolated from HAP, including MRSA. A trend to replacement of ST228 with ST22 was noticed compared with previous studies.


Assuntos
Antibacterianos/farmacologia , Cefalosporinas/farmacologia , Infecção Hospitalar/epidemiologia , Pneumonia Bacteriana/epidemiologia , Infecções Estafilocócicas/epidemiologia , Antibacterianos/uso terapêutico , Técnicas de Tipagem Bacteriana , Cefalosporinas/uso terapêutico , Infecção Hospitalar/microbiologia , DNA Bacteriano/genética , Humanos , Itália/epidemiologia , Staphylococcus aureus Resistente à Meticilina/efeitos dos fármacos , Staphylococcus aureus Resistente à Meticilina/genética , Testes de Sensibilidade Microbiana , Epidemiologia Molecular , Tipagem de Sequências Multilocus , Prevalência , Vigilância em Saúde Pública , Infecções Estafilocócicas/microbiologia , Staphylococcus aureus/efeitos dos fármacos , Staphylococcus aureus/genética , Virulência/genética , Sequenciamento Completo do Genoma
9.
New Microbiol ; 42(1): 61-63, 2019 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-30671582

RESUMO

Seasonal influenza A (IA) and B (IB) viruses co-circulate every year, causing respiratory tract infections in individuals of all ages. Recently, the association between laboratory-confirmed influenza infection and acute myocardial infarction has been clearly demonstrated. However, most of the reported cases of fulminant myocarditis had been associated with influenza virus type A infection. Here we report the case of a 44 y/o man who experienced myocarditis with cardiogenic shock [requiring percutaneous extracorporeal membrane oxygenation (ECMO) support], following influenza B virus infection, which circulated widely in Italy in 2017-18.


Assuntos
Oxigenação por Membrana Extracorpórea , Influenza Humana , Miocardite , Adulto , Humanos , Influenza Humana/complicações , Itália , Masculino , Miocardite/complicações , Miocardite/terapia , Choque Cardiogênico/etiologia , Choque Cardiogênico/terapia
10.
J Antimicrob Chemother ; 73(3): 664-671, 2018 03 01.
Artigo em Inglês | MEDLINE | ID: mdl-29216350

RESUMO

Objectives: Pseudomonas aeruginosa is a major cause of severe healthcare-associated infections and often shows MDR phenotypes. Ceftolozane/tazobactam is a new cephalosporin/ß-lactamase inhibitor combination with potent activity against P. aeruginosa. This survey was carried out to evaluate the susceptibility of P. aeruginosa, circulating in Italy, to ceftolozane/tazobactam and comparators and to investigate the molecular epidemiology of carbapenemase-producing strains. Methods: Consecutive non-replicate P. aeruginosa clinical isolates (935) from bloodstream infections and lower respiratory tract infections were collected from 20 centres distributed across Italy from September 2013 to November 2014. Antimicrobial susceptibility testing was performed by broth microdilution and results were interpreted according to the EUCAST breakpoints. Isolates resistant to ceftolozane/tazobactam were investigated for carbapenemase genes by PCR, and for carbapenemase activity by spectrophotometric assay. WGS using an Illumina platform was performed on carbapenemase-producing isolates. Results: Ceftolozane/tazobactam was the most active molecule, retaining activity against 90.9% of P. aeruginosa isolates, followed by amikacin (88.0% susceptibility) and colistin (84.7% susceptibility). Overall, 48 isolates (5.1%) were positive for carbapenemase genes, including blaVIM (n = 32), blaIMP (n = 12) and blaGES-5 (n = 4), while the remaining ceftolozane/tazobactam-resistant isolates tested negative for carbapenemase production. Carbapenemase producers belonged to 10 different STs, with ST175 (n = 12) and ST621 (n = 11) being the most common lineages. Genome analysis revealed different trajectories of spread for the different carbapenemase genes. Conclusions: Ceftolozane/tazobactam exhibited potent in vitro activity against P. aeruginosa causing invasive infections in Italy. Carbapenemase production was the most common mechanism of resistance to ceftolozane/tazobactam.


Assuntos
Proteínas de Bactérias/biossíntese , Cefalosporinas/farmacologia , Infecção Hospitalar/epidemiologia , Infecções por Pseudomonas/epidemiologia , Pseudomonas aeruginosa/efeitos dos fármacos , Pseudomonas aeruginosa/genética , Tazobactam/farmacologia , beta-Lactamases/biossíntese , Antibacterianos/farmacologia , Antibacterianos/uso terapêutico , Bacteriemia/epidemiologia , Proteínas de Bactérias/genética , Cefalosporinas/uso terapêutico , Infecção Hospitalar/microbiologia , DNA Bacteriano/genética , Farmacorresistência Bacteriana Múltipla , Monitoramento Epidemiológico , Humanos , Itália/epidemiologia , Testes de Sensibilidade Microbiana , Pseudomonas aeruginosa/enzimologia , Infecções Respiratórias/epidemiologia , Infecções Respiratórias/microbiologia , Tazobactam/uso terapêutico , Sequenciamento Completo do Genoma , beta-Lactamases/genética
11.
Euro Surveill ; 22(31)2017 Aug 03.
Artigo em Inglês | MEDLINE | ID: mdl-28797330

RESUMO

Extended-spectrum beta-lactamases (ESBLs), AmpC-type beta-lactamases (ACBLs) and carbapenemases are among the most important resistance mechanisms in Enterobacteriaceae. This study investigated the presence of these resistance mechanisms in consecutive non-replicate isolates of Escherichia coli (n = 2,352), Klebsiella pneumoniae (n = 697), and Proteus mirabilis (n = 275) from an Italian nationwide cross-sectional survey carried out in October 2013. Overall, 15.3% of isolates were non-susceptible to extended-spectrum cephalosporins but susceptible to carbapenems (ESCR-carbaS), while 4.3% were also non-susceptible to carbapenems (ESCR-carbaR). ESCR-carbaS isolates were contributed by all three species, with higher proportions among isolates from inpatients (20.3%) but remarkable proportions also among those from outpatients (11.1%). Most ESCR-carbaS isolates were ESBL-positive (90.5%), and most of them were contributed by E. coli carrying blaCTX-M group 1 genes. Acquired ACBLs were less common and mostly detected in P. mirabilis. ESCR-carbaR isolates were mostly contributed by K. pneumoniae (25.1% and 7.7% among K. pneumoniae isolates from inpatients and outpatients, respectively), with blaKPC as the most common carbapenemase gene. Results showed an increasing trend for both ESBL and carbapenemase producers in comparison with previous Italian surveys, also among outpatients.


Assuntos
Antibacterianos/farmacologia , Cefalosporinas/farmacologia , Escherichia coli/enzimologia , Klebsiella pneumoniae/enzimologia , Proteus mirabilis/enzimologia , beta-Lactamases/análise , Proteínas de Bactérias , Estudos Transversais , Infecções por Enterobacteriaceae/epidemiologia , Infecções por Enterobacteriaceae/microbiologia , Escherichia coli/efeitos dos fármacos , Escherichia coli/genética , Escherichia coli/isolamento & purificação , Infecções por Escherichia coli/epidemiologia , Feminino , Humanos , Itália/epidemiologia , Klebsiella pneumoniae/efeitos dos fármacos , Klebsiella pneumoniae/genética , Klebsiella pneumoniae/isolamento & purificação , Masculino , Testes de Sensibilidade Microbiana , Epidemiologia Molecular , Pacientes Ambulatoriais , Infecções por Proteus/epidemiologia , Proteus mirabilis/efeitos dos fármacos , Proteus mirabilis/genética , Proteus mirabilis/isolamento & purificação , beta-Lactamases/genética , beta-Lactamases/metabolismo
12.
Antimicrob Agents Chemother ; 60(4): 2509-12, 2016 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-26824959

RESUMO

Using aGalleria mellonellaanimal model, we compared the virulence of two sequence type 258 (ST258) KPC-producingKlebsiella pneumoniaestrains, which were representative of the two clades of this clonal lineage, with that of isogenic colistin-resistantmgrBmutants. With both strains, themgrBmutants did not exhibit modification in virulence. In theG. mellonellamodel, the clade 1 strain (capsular typecps-1[wzi29, producing KPC-2]) was significantly more virulent than the clade 2 strain (capsular typecps-2[wzi154, producing KPC-3]).


Assuntos
Proteínas de Bactérias/genética , Genes Reguladores , Klebsiella pneumoniae/genética , Klebsiella pneumoniae/patogenicidade , Plasmídeos/química , beta-Lactamases/genética , Animais , Antibacterianos/farmacologia , Proteínas de Bactérias/metabolismo , Células Clonais , Colistina/farmacologia , Farmacorresistência Bacteriana/genética , Expressão Gênica , Inativação Gênica , Genótipo , Klebsiella pneumoniae/efeitos dos fármacos , Klebsiella pneumoniae/crescimento & desenvolvimento , Larva/microbiologia , Testes de Sensibilidade Microbiana , Mariposas/microbiologia , Plasmídeos/metabolismo , Virulência , beta-Lactamases/metabolismo
13.
Antimicrob Agents Chemother ; 60(9): 5612-5, 2016 09.
Artigo em Inglês | MEDLINE | ID: mdl-27401575

RESUMO

A novel mcr variant, named mcr-1.2, encoding a Gln3-to-Leu functional variant of MCR-1, was detected in a KPC-3-producing ST512 Klebsiella pneumoniae isolate collected in Italy from a surveillance rectal swab from a leukemic child. The mcr-1.2 gene was carried on a transferable IncX4 plasmid whose structure was very similar to that of mcr-1-bearing plasmids previously found in Escherichia coli and K. pneumoniae strains from geographically distant sites (Estonia, China, and South Africa).


Assuntos
Proteínas de Bactérias/genética , Colistina/uso terapêutico , Farmacorresistência Bacteriana/genética , Variação Genética/genética , Klebsiella pneumoniae/genética , Plasmídeos/genética , beta-Lactamases/genética , Antibacterianos/uso terapêutico , Carbapenêmicos/uso terapêutico , Criança , China , Escherichia coli/efeitos dos fármacos , Escherichia coli/genética , Estônia , Humanos , Infecções por Klebsiella/tratamento farmacológico , Klebsiella pneumoniae/efeitos dos fármacos , África do Sul
14.
J Antimicrob Chemother ; 71(12): 3386-3391, 2016 12.
Artigo em Inglês | MEDLINE | ID: mdl-27585968

RESUMO

OBJECTIVES: The spread of carbapenem-resistant Enterobacteriaceae (CRE) represents one of the most worrisome problems for clinical medicine worldwide. In Italy, the Antibiotic-Resistance-Istituto Superiore di Sanità surveillance network, in collaboration with the Committee for Antimicrobial Agents of the Italian Society of Clinical Microbiologists, promoted a study to investigate the carbapenem-resistance mechanisms, clonal relatedness and capsular typing of a recent collection of carbapenem-resistant Klebsiella pneumoniae (CR-KP). METHODS: A total of 17 laboratories distributed across Italy collected all consecutive non-replicate CR-KP isolated from invasive infections during two different study periods (2011-12 and 2013). Carbapenemase genes were searched for by filter hybridization and confirmed by PCR and sequencing. KPC-producing K. pneumoniae (KPC-KP) were typed by PFGE and MLST. Capsular types were identified by wzi gene typing. RESULTS: Of the collected K. pneumoniae isolates (n = 461), the overall proportion of CR-KP was 36.2% (n = 167). The majority (97%) of the CR-KP were positive for the blaKPC gene. Among the KPC-KP population, nine different STs were detected with the majority of isolates (94%) belonging to the clonal group (CG) 258. A subpopulation that belonged to ST512 and showed an identical PFGE profile represented the majority (57%) of KPC-KP strains, with a countrywide distribution. Capsular characterization showed the predominance of the wzi154, cps-2 capsular type (88.8% of all CG258 strains). ST258 strains were associated with both cps-1 and cps-2 capsular types, while ST512 was associated with cps-2 only. CONCLUSIONS: Although a trend to a polyclonal evolution of the Italian KPC-KP was noted, this study showed that the KPC-KP population remained largely oligoclonal with the wide diffusion of an ST512 lineage carrying cps-2 capsular type and producing the KPC-3 enzyme.


Assuntos
Variação Genética , Genótipo , Infecções por Klebsiella/epidemiologia , Infecções por Klebsiella/microbiologia , Klebsiella pneumoniae/classificação , Klebsiella pneumoniae/enzimologia , beta-Lactamases/genética , Estudos Transversais , Eletroforese em Gel de Campo Pulsado , Humanos , Itália/epidemiologia , Klebsiella pneumoniae/genética , Klebsiella pneumoniae/isolamento & purificação , Epidemiologia Molecular , Tipagem de Sequências Multilocus , Sorogrupo
15.
New Microbiol ; 39(3): 235-236, 2016 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-27284989

RESUMO

This report describes a case of Clostridium difficile ribotype 033 colitis in a patient treated with multiple antibiotics for KPC-producing Klebsiella pneumoniae pancreatitis. Diagnostic, clinical and therapeutic features are discussed. To the best of our knowledge, this is the first case of C. difficile ribotype 033 clinical infection reported from Italy.


Assuntos
Antibacterianos/efeitos adversos , Clostridioides difficile , Enterocolite Pseudomembranosa/etiologia , Infecções por Klebsiella/tratamento farmacológico , Klebsiella pneumoniae/enzimologia , beta-Lactamases/metabolismo , Idoso de 80 Anos ou mais , Antibacterianos/uso terapêutico , Enterocolite Pseudomembranosa/epidemiologia , Humanos , Itália/epidemiologia , Infecções por Klebsiella/epidemiologia , Masculino
16.
J Clin Microbiol ; 53(10): 3341-4, 2015 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-26202124
17.
New Microbiol ; 38(2): 245-50, 2015 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-25938749

RESUMO

Microbial identification from blood cultures is essential to institute optimal antibiotic therapy and improve survival possibilities. Matrix-assisted laser desorption ionization-time of flight mass spectrometry (MALDI-TOF MS) has been successfully applied to identify bacteria and yeasts from positive blood cultures broths. The aim of this multicentre study was to evaluate the reliability of the lysis-filtration technique associated with MALDI-TOF MS to directly identify microorganisms from 765 positive blood cultures collected in six Italian hospitals. Overall, 675/765 (78.1%) blood isolates were correctly identified at the species level, with significant differences between Gram-negative and Gram-positive bacteria (92.6%, and 69.8%, respectively). Some difficulties arise in identifying Streptococcus pneumoniae, Staphylococcus aureus, yeasts and anaerobes. The lysis-filtration protocol is a suitable procedure in terms of performance in identifying microorganisms, but it is quite expensive and technically time-consuming since the time of filtration is not regular for all the samples. The application of the MALDI-TOF MS technique to the direct microbial identification from positive blood cultures is a very promising approach, even if more experience must be gained to minimize errors and costs.


Assuntos
Bactérias/isolamento & purificação , Infecções Bacterianas/microbiologia , Técnicas de Tipagem Bacteriana/métodos , Sangue/microbiologia , Espectrometria de Massas por Ionização e Dessorção a Laser Assistida por Matriz/métodos , Bactérias/química , Bactérias/classificação , Infecções Bacterianas/sangue , Humanos
19.
Antimicrob Agents Chemother ; 58(10): 5696-703, 2014 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-25022583

RESUMO

Klebsiella pneumoniae strains producing KPC-type carbapenemases (KPC-KP) are challenging multidrug-resistant pathogens due to their extensively drug-resistant phenotypes and potential for epidemic dissemination in health care settings. Colistin is a key component of the combination antimicrobial regimens used for treatment of severe KPC-KP infections. We previously reported that insertional inactivation of the mgrB gene, encoding a negative-feedback regulator of the PhoQ-PhoP signaling system, can be responsible for colistin resistance in KPC-KP, due to the resulting upregulation of the Pmr lipopolysaccharide modification system. In this work we investigated the status of the mgrB gene in a collection of 66 colistin-resistant nonreplicate clinical strains of KPC-KP isolated from different hospitals in Italy and Greece. Overall, 35 strains (53%) exhibited alterations of the mgrB gene, including insertions of different types of mobile elements (IS5-like, IS1F-like, or ISKpn14), nonsilent point mutations, and small intragenic deletions. Four additional strains had a larger deletion of the mgrB locus, while the remaining 27 strains (41%) did not show mgrB alterations. Transcriptional upregulation of the phoQ and pmrK genes (part of the phoPQ and pmrHFIJKLM operon, respectively) was observed in all strains with mgrB alterations. Complementation experiments with a wild-type mgrB gene restored colistin susceptibility and basal expression levels of phoQ and pmrK genes in strains carrying different types of mgrB alterations. The present results suggest that mgrB alteration can be a common mechanism of colistin resistance among KPC-KP in the clinical setting.


Assuntos
Antibacterianos/farmacologia , Proteínas de Bactérias/metabolismo , Colistina/farmacologia , Klebsiella pneumoniae/efeitos dos fármacos , Klebsiella pneumoniae/metabolismo , beta-Lactamases/metabolismo , Proteínas de Bactérias/genética , Farmacorresistência Bacteriana Múltipla/genética , Klebsiella pneumoniae/genética , Testes de Sensibilidade Microbiana , beta-Lactamases/genética
20.
Antimicrob Agents Chemother ; 58(8): 4399-403, 2014 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-24841267

RESUMO

Colistin is a key drug for the treatment of infections caused by extensively drug-resistant strains of Enterobacteriaceae producing carbapenemases. However, the emergence of colistin resistance is being increasingly reported, especially among Klebsiella pneumoniae strains producing KPC-type carbapenemases (KPC-KP). In this work, we investigated colistin-susceptible (KPB-1) and colistin-resistant (KPB-2) sequential isolates obtained from a patient with a KPC-KP infection before and after low-dosage colistin treatment, respectively. By using a next-generation sequencing approach and comparative genomic analysis of the two isolates, we detected in KPB-2 a nonsynonymous nucleotide substitution in the gene encoding the PmrB sensor kinase, resulting in a leucine-to-arginine substitution at amino acid position 82. Compared with KPB-1, KPB-2 exhibited upregulated transcription of pmrA and of pmrK, which is part of the pmrHFIJKLM operon responsible for modification of the colistin lipopolysaccharide target. Complementation with wild-type pmrB in KPB-2 restored colistin susceptibility and reduced the transcription of pmrA and pmrK to basal levels, while expression of PmrB(L82R) in KPB-1 did not alter colistin susceptibility or upregulate pmrA and pmrK expression, confirming the dominance of wild-type PmrB versus the PmrB(L82R) mutant. The present results indicated that PmrB mutations mediating colistin resistance may be selected during low-dosage colistin treatment. The colistin-resistant phenotype of KPB-2 was stable for up to 50 generations in the absence of selective pressure and was not associated with a significant fitness cost in a competition experiment.


Assuntos
Antibacterianos/farmacologia , Proteínas de Bactérias/genética , Colistina/farmacologia , Regulação Bacteriana da Expressão Gênica , Klebsiella pneumoniae/genética , Fatores de Transcrição/genética , Resistência beta-Lactâmica/genética , beta-Lactamases/genética , Substituição de Aminoácidos , Antibacterianos/metabolismo , Proteínas de Bactérias/metabolismo , Células Clonais , Colistina/metabolismo , Cálculos da Dosagem de Medicamento , Humanos , Infecções por Klebsiella/tratamento farmacológico , Infecções por Klebsiella/microbiologia , Klebsiella pneumoniae/efeitos dos fármacos , Klebsiella pneumoniae/enzimologia , Klebsiella pneumoniae/isolamento & purificação , Lipopolissacarídeos/metabolismo , Testes de Sensibilidade Microbiana , Mutação , Óperon , Fatores de Transcrição/metabolismo , beta-Lactamases/metabolismo
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