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Nat Commun ; 15(1): 1000, 2024 Feb 02.
Artigo em Inglês | MEDLINE | ID: mdl-38307862

RESUMO

The chromatin remodeler ALC1 is activated by DNA damage-induced poly(ADP-ribose) deposited by PARP1/PARP2 and their co-factor HPF1. ALC1 has emerged as a cancer drug target, but how it is recruited to ADP-ribosylated nucleosomes to affect their positioning near DNA breaks is unknown. Here we find that PARP1/HPF1 preferentially initiates ADP-ribosylation on the histone H2B tail closest to the DNA break. To dissect the consequences of such asymmetry, we generate nucleosomes with a defined ADP-ribosylated H2B tail on one side only. The cryo-electron microscopy structure of ALC1 bound to such an asymmetric nucleosome indicates preferential engagement on one side. Using single-molecule FRET, we demonstrate that this asymmetric recruitment gives rise to directed sliding away from the DNA linker closest to the ADP-ribosylation site. Our data suggest a mechanism by which ALC1 slides nucleosomes away from a DNA break to render it more accessible to repair factors.


Assuntos
Nucleossomos , Poli ADP Ribosilação , Nucleossomos/genética , Microscopia Crioeletrônica , Poli(ADP-Ribose) Polimerase-1/metabolismo , Cromatina , Reparo do DNA , Quebras de DNA
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