Detalhe da pesquisa
1.
dnadna: a deep learning framework for population genetics inference.
Bioinformatics
; 39(1)2023 01 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-36445000
2.
Host Range and Genetic Plasticity Explain the Coexistence of Integrative and Extrachromosomal Mobile Genetic Elements.
Mol Biol Evol
; 35(9): 2230-2239, 2018 09 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-29905872
3.
Integrative and conjugative elements and their hosts: composition, distribution and organization.
Nucleic Acids Res
; 45(15): 8943-8956, 2017 Sep 06.
Artigo
em Inglês
| MEDLINE | ID: mdl-28911112
4.
Identification and analysis of integrons and cassette arrays in bacterial genomes.
Nucleic Acids Res
; 44(10): 4539-50, 2016 06 02.
Artigo
em Inglês
| MEDLINE | ID: mdl-27130947
5.
Host Range and Genetic Plasticity Explain the Coexistence of Integrative and Extrachromosomal Mobile Genetic Elements.
Mol Biol Evol
; 35(11): 2850, 2018 11 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-30418640
6.
Integron cassettes integrate into bacterial genomes via widespread non-classical attG sites.
Nat Microbiol
; 9(1): 228-240, 2024 Jan.
Artigo
em Inglês
| MEDLINE | ID: mdl-38172619
7.
Cultural transmission of reproductive success impacts genomic diversity, coalescent tree topologies, and demographic inferences.
Genetics
; 223(4)2023 04 06.
Artigo
em Inglês
| MEDLINE | ID: mdl-36786657
8.
Expanding the stdpopsim species catalog, and lessons learned for realistic genome simulations.
Elife
; 122023 06 21.
Artigo
em Inglês
| MEDLINE | ID: mdl-37342968
9.
CRISPR-Cas and restriction-modification team up to achieve long-term immunity.
Trends Microbiol
; 30(6): 513-514, 2022 06.
Artigo
em Inglês
| MEDLINE | ID: mdl-35469710
10.
Systematic and quantitative view of the antiviral arsenal of prokaryotes.
Nat Commun
; 13(1): 2561, 2022 05 10.
Artigo
em Inglês
| MEDLINE | ID: mdl-35538097
11.
IntegronFinder 2.0: Identification and Analysis of Integrons across Bacteria, with a Focus on Antibiotic Resistance in Klebsiella.
Microorganisms
; 10(4)2022 Mar 24.
Artigo
em Inglês
| MEDLINE | ID: mdl-35456751
12.
Deep learning for population size history inference: Design, comparison and combination with approximate Bayesian computation.
Mol Ecol Resour
; 21(8): 2645-2660, 2021 Nov.
Artigo
em Inglês
| MEDLINE | ID: mdl-32644216
13.
Identifying Conjugative Plasmids and Integrative Conjugative Elements with CONJscan.
Methods Mol Biol
; 2075: 265-283, 2020.
Artigo
em Inglês
| MEDLINE | ID: mdl-31584169
14.
Author Correction: The chromosomal organization of horizontal gene transfer in bacteria.
Nat Commun
; 11(1): 1155, 2020 Feb 26.
Artigo
em Inglês
| MEDLINE | ID: mdl-32103021
15.
Structure-specific DNA recombination sites: Design, validation, and machine learning-based refinement.
Sci Adv
; 6(30): eaay2922, 2020 07.
Artigo
em Inglês
| MEDLINE | ID: mdl-32832653
16.
Intracellular Positioning Systems Limit the Entropic Eviction of Secondary Replicons Toward the Nucleoid Edges in Bacterial Cells.
J Mol Biol
; 432(3): 745-761, 2020 02 07.
Artigo
em Inglês
| MEDLINE | ID: mdl-31931015
17.
A simple, reproducible and cost-effective procedure to analyse gut phageome: from phage isolation to bioinformatic approach.
Sci Rep
; 9(1): 11331, 2019 08 05.
Artigo
em Inglês
| MEDLINE | ID: mdl-31383878
18.
The chromosomal organization of horizontal gene transfer in bacteria.
Nat Commun
; 8(1): 841, 2017 10 10.
Artigo
em Inglês
| MEDLINE | ID: mdl-29018197
19.
Differences in Integron Cassette Excision Dynamics Shape a Trade-Off between Evolvability and Genetic Capacitance.
mBio
; 8(2)2017 03 28.
Artigo
em Inglês
| MEDLINE | ID: mdl-28351923
20.
Evolutionary dynamics and genomic features of the Elizabethkingia anophelis 2015 to 2016 Wisconsin outbreak strain.
Nat Commun
; 8: 15483, 2017 05 24.
Artigo
em Inglês
| MEDLINE | ID: mdl-28537263