Your browser doesn't support javascript.
loading
Mostrar: 20 | 50 | 100
Resultados 1 - 20 de 20
Filtrar
Mais filtros

Tipo de documento
Intervalo de ano de publicação
1.
Nucleic Acids Res ; 50(6): 3581-3592, 2022 04 08.
Artigo em Inglês | MEDLINE | ID: mdl-35323947

RESUMO

Direct cloning of biosynthetic gene clusters (BGCs) from microbial genomes facilitates natural product-based drug discovery. Here, by combining Cas12a and the advanced features of bacterial artificial chromosome library construction, we developed a fast yet efficient in vitro platform for directly capturing large BGCs, named CAT-FISHING (CRISPR/Cas12a-mediated fast direct biosynthetic gene cluster cloning). As demonstrations, several large BGCs from different actinomycetal genomic DNA samples were efficiently captured by CAT-FISHING, the largest of which was 145 kb with 75% GC content. Furthermore, the directly cloned, 110 kb long, cryptic polyketide encoding BGC from Micromonospora sp. 181 was then heterologously expressed in a Streptomyces chassis. It turned out to be a new macrolactam compound, marinolactam A, which showed promising anticancer activity. Our results indicate that CAT-FISHING is a powerful method for complicated BGC cloning, and we believe that it would be an important asset to the entire community of natural product-based drug discovery.


Assuntos
Produtos Biológicos , Streptomyces , Sistemas CRISPR-Cas , Clonagem Molecular , Família Multigênica , Streptomyces/genética
2.
Appl Microbiol Biotechnol ; 105(13): 5407-5417, 2021 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-34155529

RESUMO

Fungal terpenoids catalyzed by bifunctional terpene synthases (BFTSs) possess interesting bioactive and chemical properties. In this study, an integrated approach of genome mining, heterologous expression, and in vitro enzymatic activity assay was used, and these identified a unique BFTS sub-clade critical to the formation of a 5-15 trans-fused bicyclic sesterterpene preterpestacin I (1). The 5-15 bicyclic BFTS gene clusters were highly conserved but showed relatively wide phylogenetic distribution across several species of the diverged fungal classes Dothideomycetes and Sordariomycetes. Further genomic organization analysis of these homologous biosynthetic gene clusters from this clade revealed a glycosyltransferase from the graminaceous pathogen Bipolaris sorokiniana isolate BS11134, which was absent in other 5-15 bicyclic BFTS gene clusters. Targeted isolation guided by BFTS gene deletion led to the identification of two new sesterterpenoids (4, and 6) from BS11134. Compounds 2 and 4 showed moderate effects on LPS-induced nitrous oxide production in the murine macrophage-like cell line RAW264.7 with in vitro inhibition rates of 36.6 ± 2.4% and 24.9 ± 2.1% at 10 µM, respectively. The plausible biosynthetic pathway of these identified compounds was proposed as well. This work revealed that phytopathogenic fungi can serve as important sources of active terpenoids via systematic analysis of the genomic organization of BFTS biosynthetic gene clusters, their phylogenetic distribution in fungi, and cyclization properties of their metabolic products. KEY POINTS: • Genome mining of the first BFTS BGC harboring a glycosyltransferase. • Gene-deletion guided isolation revealed three novel 5-15 bicyclic sesterterpenoids. • Biosynthetic pathway of isolated sesterterpenoids was proposed.


Assuntos
Vias Biossintéticas , Fungos , Animais , Anti-Inflamatórios , Vias Biossintéticas/genética , Fungos/genética , Camundongos , Família Multigênica , Filogenia , Terpenos
3.
Appl Microbiol Biotechnol ; 104(4): 1533-1543, 2020 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-31894364

RESUMO

Marine microorganisms live in dramatically different environments and have attracted much attention for their structurally unique natural products with potential strong biological activity. Based on the one strain-many compounds (OSMAC) strategy and liquid chromatography mass spectrometry (LC-MS) methods, our continuing efforts on the investigation of novel active compounds from marine Verrucosispora sp. MS100137 has led to the identification of a new polycyclic metabolite, abyssomicin Y (1), together with six known abyssomicin and proximicin analogs (2-7). Abyssomicin Y is a type I abyssomicin with an epoxide group at C-8 and C-9. Compounds 1-3 showed potent inhibitory effects against the influenza A virus; their observed inhibition rates were 97.9%, 98.3%, and 95.9%, respectively, at a concentration of 10 µM, and they displayed lower cytotoxicity than 4. The structures were determined by different NMR techniques and HRMS experiments. This investigation revealed that OSMAC could serve as a useful method for enabling the activation of the silent genes in the microorganism and for the formation of previously unreported active secondary metabolites.


Assuntos
Antivirais/farmacologia , Organismos Aquáticos/química , Compostos Bicíclicos Heterocíclicos com Pontes/farmacologia , Vírus da Influenza A/efeitos dos fármacos , Micromonosporaceae/química , Células A549 , Antivirais/isolamento & purificação , Produtos Biológicos/isolamento & purificação , Produtos Biológicos/farmacologia , Compostos Bicíclicos Heterocíclicos com Pontes/isolamento & purificação , Cromatografia Líquida , Humanos , Espectrometria de Massas , Metabolismo Secundário
4.
J Ind Microbiol Biotechnol ; 45(5): 335-344, 2018 May.
Artigo em Inglês | MEDLINE | ID: mdl-29572612

RESUMO

Nonribosomal peptide synthetases (NRPSs) are multi-modular enzymes involved in the biosynthesis of natural products. Bacillamide C was synthesized by Bacillus atrophaeus C89. A nonribosomal peptide synthetase (NRPS) cluster found in the genome of B. atrophaeus C89 was hypothesized to be responsible for the biosynthesis of bacillamide C using alanine and cysteine as substrates. Here, the structure analysis of adenylation domains based on homologous proteins with known crystal structures indicated locations of the substrate-binding pockets. Molecular docking suggested alanine and cysteine as the potential substrates for the two adenylation domains in the NRPS cluster. Furthermore, biochemical characterization of the purified recombinant adenylation domains proved that alanine and cysteine were the optimum substrates for the two adenylation domains. The results provided the in vitro evidence for the hypothesis that the two adenylation domains in the NRPS of B. atrophaeus C89 preferentially select alanine and cysteine, respectively, as a substrate to synthesize bacillamide C. Furthermore, this study on substrates selectivity of adenylation domains provided basis for rational design of bacillamide analogs.


Assuntos
Bacillus/metabolismo , Peptídeo Sintases/metabolismo , Tiazóis/metabolismo , Triptaminas/metabolismo , Bacillus/genética , Cisteína/metabolismo , Simulação de Acoplamento Molecular , Domínios Proteicos , Especificidade por Substrato
5.
Exp Parasitol ; 132(2): 156-65, 2012 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-22750410

RESUMO

The present study was to determine the efficacies of anti-parasitic activities of synthesized silver nanoparticles (Ag NPs) using stem aqueous extract of Cissus quadrangularis against the adult of hematophagous fly, Hippobosca maculata (Diptera: Hippoboscidae), and the larvae of cattle tick, Rhipicephalus (Boophilus) microplus (Acari: Ixodidae). Contact toxicity method was followed to determine the potential of parasitic activity. Twelve milliliters of stem aqueous extract of C. quadrangularis was treated with 88 ml of 1mM silver nitrate (AgNO(3)) solution at room temperature for 30 min and the resulting solution was yellow-brown color indicating the formation extracellular synthesis of Ag NPs. The synthesized Ag NPs were characterized with UV-visible spectroscopy, X-ray diffraction (XRD), Fourier transform infrared spectroscopy (FTIR), Field emission scanning electron microscope (FESEM) and energy dispersive X-ray (EDX) spectroscopy. The synthesized Ag NPs were recorded by UV-visible spectrum at 420 nm and XRD patterns showed the nanoparticles crystalline in nature. FTIR analysis confirmed that the bioreduction of Ag((+)) ions to Ag NPs were due to the reduction by capping material of plant extract. FESEM image of Ag NPs showed spherical and oval in shape. By using the Bragg's Law and Scherrer's constant, the average mean size of synthesized Ag NPs was 42.46 nm. The spot EDX analysis showed the complete chemical composition of the synthesized Ag NPs. The mortality obtained by the synthesized Ag NPs from the C. quadrangularis was more effective than the aqueous extract of C. quadrangularis and AgNO(3) solution (1 mM). The adulticidal activity was observed in the aqueous extract, AgNO(3) solution and synthesized Ag NPs against the adult of H. maculata with LC(50) values of 37.08, 40.35 and 6.30 mg/L; LC(90) values of 175.46, 192.17 and 18.14 mg/L and r(2) values of 0.970, 0.992 and 0.969, respectively. The maximum efficacy showed in the aqueous extract, AgNO(3) solution and synthesized Ag NPs against the larvae of R. (B.) microplus with LC(50) values of 50.00, 21.72 and 7.61 mg/L; LC(90) values of 205.12, 82.99 and 22.68 mg/L and r(2) values of 0.968, 0.945 and 0.994, respectively. The present study is the first report on antiparasitic activity of the experimental plant extract and synthesized Ag NPs. This is an ideal eco-friendly and inexpensive approach for the control of H. maculata and R. (B.) microplus.


Assuntos
Cissus/química , Dípteros/efeitos dos fármacos , Extratos Vegetais/farmacologia , Rhipicephalus/efeitos dos fármacos , Animais , Bioensaio , Bovinos , Doenças dos Bovinos/tratamento farmacológico , Doenças dos Bovinos/parasitologia , Ectoparasitoses/tratamento farmacológico , Ectoparasitoses/veterinária , Feminino , Larva/efeitos dos fármacos , Dose Letal Mediana , Nanopartículas Metálicas/química , Microscopia Eletrônica de Varredura/métodos , Extratos Vegetais/uso terapêutico , Caules de Planta/química , Prata , Nitrato de Prata , Soluções , Espectrometria por Raios X , Espectrofotometria Ultravioleta , Espectroscopia de Infravermelho com Transformada de Fourier , Infestações por Carrapato/tratamento farmacológico , Infestações por Carrapato/veterinária , Difração de Raios X
6.
Parasitol Res ; 111(2): 921-33, 2012 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-21638210

RESUMO

The purpose of the present study was to investigate the acaricidal and larvicidal activity against the larvae of Haemaphysalis bispinosa Neumann (Acarina: Ixodidae) and larvae of hematophagous fly Hippobosca maculata Leach (Diptera: Hippoboscidae) and against the fourth-instar larvae of malaria vector, Anopheles stephensi Liston, Japanese encephalitis vector, Culex tritaeniorhynchus Giles (Diptera: Culicidae) of synthesized silver nanoparticles (AgNPs) utilizing aqueous leaf extract from Musa paradisiaca L. (Musaceae). The color of the extract changed to light brown within an hour, and later it changed to dark brown during the 30-min incubation period. AgNPs results were recorded from UV-vis spectrum at 426 nm; Fourier transform infrared (FTIR) analysis confirmed that the bioreduction of Ag(+) ions to silver nanoparticles are due to the reduction by capping material of plant extract, X-ray diffraction (XRD) patterns clearly illustrates that the nanoparticles formed in the present synthesis are crystalline in nature and scanning electron microscopy (SEM) support the biosynthesis and characterization of AgNPs with rod in shape and size of 60-150 nm. After reaction, the XRD pattern of AgNPs showed diffraction peaks at 2θ = 34.37°, 38.01°, 44.17°, 66.34° and 77.29° assigned to the (100), (111), (102), (110) and (120) planes, respectively, of a faced centre cubic (fcc) lattice of silver were obtained. For electron microscopic studies, a 25 µl sample was sputter-coated on copper stub, and the images of nanoparticles were studied using scanning electron microscopy. The spot EDX analysis showed the complete chemical composition of the synthesized AgNPs. The parasite larvae were exposed to varying concentrations of aqueous extract of M. paradisiaca and synthesized AgNPs for 24 h. In the present study, the percent mortality of aqueous extract of M. paradisiaca were 82, 71, 46, 29, 11 and 78, 66, 38, 31and 16 observed in the concentrations of 50, 40, 30, 20, 10 mg/l for 24 h against the larvae of H. bispinosa and Hip. maculata, respectively. The maximum efficacy was observed in the aqueous extract of M. paradisiaca against the H. bispinosa, Hip. maculata, and the larvae of A. stephensi, C. tritaeniorhynchus with LC(50) values of 28.96, 31.02, 26.32, and 20.10 mg/lm, respectively (r (2) = 0.990, 0.968, 0.974, and 0.979, respectively). The synthesized AgNPs of M. paradisiaca showed the LC(50) and r (2) values against H. bispinosa, (1.87 mg/l; 0.963), Hip. maculata (2.02 mg/l; 0.976), and larvae of A. stephensi (1.39; 0.900 mg/l), against C. tritaeniorhynchus (1.63 mg/l; 0.951), respectively. The χ (2) values were significant at p < 0.05 level.


Assuntos
Acaricidas/farmacologia , Insetos/efeitos dos fármacos , Ixodidae/efeitos dos fármacos , Nanopartículas Metálicas/química , Musa/metabolismo , Prata/farmacologia , Acaricidas/química , Animais , Frutas , Larva/efeitos dos fármacos , Extratos Vegetais/química , Extratos Vegetais/farmacologia , Prata/química
7.
Curr Opin Biotechnol ; 69: 308-315, 2021 06.
Artigo em Inglês | MEDLINE | ID: mdl-34116375

RESUMO

The marine environment is the most biologically and chemically diverse habitat on Earth, and provides numerous marine-derived products, including enzymes and molecules, for industrial and pharmaceutical applications. Marine biotechnology provides important biological resources from marine habitat conservation to applied science. In recent years, advances in techniques in interdisciplinary research fields, including metabolic engineering and synthetic biology have significantly improved the production of marine-derived commodities. In this review, we outline the recent progress in the use or marine enzymes and molecules in biotechnology, including newly discovered products, function optimization of enzymes, and production improvement of small molecules.


Assuntos
Biotecnologia , Engenharia Metabólica , Ecossistema , Enzimas/genética
8.
Nanoscale Adv ; 2(5): 1760-1773, 2020 May 19.
Artigo em Inglês | MEDLINE | ID: mdl-36132507

RESUMO

Nanoparticles possess fascinating properties and applications, and there has been increasing critical consideration of their use. Because carbon is a component with immaterial cytotoxicity and extensive biocompatibility with different components, carbon nanomaterials have a wide scope of potential uses. Carbon nanodots are a type of carbon nanoparticle that is increasingly being researched because of their astounding properties such as extraordinary luminescence, simplicity of amalgamation and surface functionalization, and biocompatibility. Because of these properties, carbon nanodots can be used as material sensors, as indicators in fluorescent tests, and as nanomaterials for biomedical applications. In this review, we report on the ongoing and noteworthy utilization of carbon quantum dots such as bioimaging tests and photocatalytic applications. In addition, the extension and future components of these materials, which can be investigated for new potential applications, are discussed.

9.
Chem Commun (Camb) ; 56(70): 10171-10174, 2020 Sep 11.
Artigo em Inglês | MEDLINE | ID: mdl-32748904

RESUMO

Two pairs of dibenzospiroketal racemates, (±)-epicospirocin A (1a/1b) and (±)-1-epi-epicospirocin A (2a/2b), and two (+)-enantiomers of aspermicrones, ent-aspermicrone B (3b) and ent-aspermicrone C (4b), together with two hemiacetal epimeric mixtures, epicospirocin B/1-epi-epicospirocin B (5/6) and epicospirocin C/1-epi-epicospirocin C (7/8), were investigated from the phytopathogenic fungus Epicoccum nigrum 09116 via MS/MS molecular networking guided isolation and chiral separation for the first time. A plausible epicospirocin biosynthetic pathway was elucidated through in silico gene function annotation together with knock-out experiments. This is the first report that has applied MS/MS molecular networking to identify intermediates correlated with a biosynthetic pathway.


Assuntos
Furanos/química , Furanos/metabolismo , Compostos de Espiro/química , Compostos de Espiro/metabolismo , Ascomicetos/genética , Ascomicetos/metabolismo , Simulação por Computador , Estereoisomerismo
10.
J Biotechnol ; 292: 5-11, 2019 Feb 20.
Artigo em Inglês | MEDLINE | ID: mdl-30641109

RESUMO

Bacillamide C, a potential natural antialgae active compound, is produced by Bacillus atrophaeus C89 derived from marine sponge Dysidea avara. A nonribosomal peptide synthetase (NRPS) cluster is hypothesized to be involved in the biosynthesis of bacillamide C. The NRPS with a domain string of A1-PCP1-Cy-A2-PCP2-C can be divided into three functional modules. After heterologous expression and purification of module A1-PCP1 and module Cy-A2-PCP2, their catalytic activities were biochemically proven in vitro by the reaction with the apo-PCP domain transformed to the holo-PCP domain through a phosphopantetheinyl transferase, ATP, and substrate amino acids. Five- membered heterocyclic AlaCysthiazole with molecular weight of 172.0389 was detected. This proved the formation of the heterocyclic dipeptide AlaCysthiazole, which is considered to be a building block for the biosynthesis of bacillamide. This study provides a basis for further biosynthesis of bacillamides.


Assuntos
Dipeptídeos/metabolismo , Peptídeo Sintases/metabolismo , Tiazóis/metabolismo , Triptaminas/metabolismo , Bacillus/metabolismo , Domínios Proteicos
11.
Synth Syst Biotechnol ; 4(4): 173-179, 2019 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-31667367

RESUMO

Microbes serve as the most important resource for drug discovery. During our screening for bioactive compounds from our natural products library, a pathogenic fungus, Microdochium majus strain 99049, from wheat was selected for further investigation. A new alkaloid named brocaeloid D (1), together with six previously characterized compounds (2-7) were identified. Compound 1 belongs to 4-oxoquinoline with C-2 reversed prenylation and a succinimide substructure. All the structures of these newly isolated compounds were determined by different means in spectroscopic experiments. The absolute configurations of 1 was further deduced from comparison of its CD spectrum with that of known compound 2. The bioactivities of these identified compounds were evaluated against several pathogenic microorganisms and cancer cell lines. Compounds 1-5 showed activity against HUH-7 human hepatoma cells with IC50 values of 80 µg/mL. Compound 6 showed mild activity against HeLa cells (IC50 = 51.9 µg/mL), weak anti-MTB activity (MIC = 80  µg/mL), and moderate anti-MRSA activity (MIC = 25 µg/mL), and compound 7 showed weak anti-MRSA activity (MIC = 100 µg/mL).

12.
Nat Commun ; 10(1): 3672, 2019 08 14.
Artigo em Inglês | MEDLINE | ID: mdl-31413315

RESUMO

Besides genome editing, CRISPR-Cas12a has recently been used for DNA detection applications with attomolar sensitivity but, to our knowledge, it has not been used for the detection of small molecules. Bacterial allosteric transcription factors (aTFs) have evolved to sense and respond sensitively to a variety of small molecules to benefit bacterial survival. By combining the single-stranded DNA cleavage ability of CRISPR-Cas12a and the competitive binding activities of aTFs for small molecules and double-stranded DNA, here we develop a simple, supersensitive, fast and high-throughput platform for the detection of small molecules, designated CaT-SMelor (CRISPR-Cas12a- and aTF-mediated small molecule detector). CaT-SMelor is successfully evaluated by detecting nanomolar levels of various small molecules, including uric acid and p-hydroxybenzoic acid among their structurally similar analogues. We also demonstrate that our CaT-SMelor directly measured the uric acid concentration in clinical human blood samples, indicating a great potential of CaT-SMelor in the detection of small molecules.


Assuntos
Proteínas Associadas a CRISPR , Sistemas CRISPR-Cas , Endodesoxirribonucleases , Fatores de Transcrição , Regulação Alostérica , Bioensaio , Clostridiales , Humanos , Limite de Detecção , Motivos de Nucleotídeos , Parabenos , Biologia Sintética , Ácido Úrico/sangue
13.
Sci Rep ; 6: 24966, 2016 04 26.
Artigo em Inglês | MEDLINE | ID: mdl-27113140

RESUMO

Nitrification directly contributes to the ammonia removal in sponges, and it plays an indispensable role in sponge-mediated nitrogen cycle. Previous studies have demonstrated genomic evidences of nitrifying lineages in the sponge Theonella swinhoei. However, little is known about the transcriptional activity of nitrifying community in this sponge. In this study, combined DNA- and transcript-based analyses were performed to reveal the composition and transcriptional activity of the nitrifiers in T. swinhoei from the South China Sea. Transcriptional activity of ammonia-oxidizing archaea (AOA) and nitrite-oxidizing bacteria (NOB) in this sponge were confirmed by targeting their nitrifying genes,16S rRNA genes and their transcripts. Phylogenetic analysis coupled with RDP rRNA classification indicated that archaeal 16S rRNA genes, amoA (the subunit of ammonia monooxygenase) genes and their transcripts were closely related to Nitrosopumilus-like AOA; whereas nitrifying bacterial 16S rRNA genes, nxrB (the subunit of nitrite oxidoreductase) genes and their transcripts were closely related to Nitrospira NOB. Quantitative assessment demonstrated relative higher abundances of nitrifying genes and transcripts of Nitrosopumilus-like AOA than those of Nitrospira NOB in this sponge. This study illustrated the transcriptional potentials of Nitrosopumilus-like archaea and Nitrospira bacteria that would predominantly contribute to the nitrification functionality in the South China Sea T. swinhoei.


Assuntos
Archaea/metabolismo , Bactérias/metabolismo , Nitrito Redutases/genética , Nitritos/metabolismo , Oxirredutases/genética , Theonella/microbiologia , Animais , Archaea/classificação , Archaea/enzimologia , Archaea/genética , Proteínas Arqueais/genética , Proteínas Arqueais/metabolismo , Bactérias/classificação , Bactérias/enzimologia , Bactérias/genética , Proteínas de Bactérias/genética , Proteínas de Bactérias/metabolismo , Perfilação da Expressão Gênica/métodos , Filogenia , RNA Ribossômico 16S/análise , Análise de Sequência de DNA/métodos , Análise de Sequência de RNA/métodos , Theonella/genética
14.
Front Microbiol ; 6: 1048, 2015.
Artigo em Inglês | MEDLINE | ID: mdl-26483773

RESUMO

Marine sponges often harbor dense and diverse microbial communities including actinobacteria. To date no comprehensive investigation has been performed on the culturable diversity of the actinomycetes associated with South China Sea sponges. Structurally novel aromatic polyketides were recently discovered from marine sponge-derived Streptomyces and Saccharopolyspora strains, suggesting that sponge-associated actinomycetes can serve as a new source of aromatic polyketides. In this study, a total of 77 actinomycete strains were isolated from 15 South China Sea sponge species. Phylogenetic characterization of the isolates based on 16S rRNA gene sequencing supported their assignment to 12 families and 20 genera, among which three rare genera (Marihabitans, Polymorphospora, and Streptomonospora) were isolated from marine sponges for the first time. Subsequently, ß-ketoacyl synthase (KSα) gene was used as marker for evaluating the potential of the actinomycete strains to produce aromatic polyketides. As a result, KSα gene was detected in 35 isolates related to seven genera (Kocuria, Micromonospora, Nocardia, Nocardiopsis, Saccharopolyspora, Salinispora, and Streptomyces). Finally, 10 strains were selected for small-scale fermentation, and one angucycline compound was detected from the culture extract of Streptomyces anulatus strain S71. This study advanced our knowledge of the sponge-associated actinomycetes regarding their diversity and potential in producing aromatic polyketides.

15.
3 Biotech ; 5(2): 153-164, 2015 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-28324576

RESUMO

The present study was focused on isolation, screening, characterization and application of biosurfactant producing marine actinobacteria. Twenty actinobacteria were isolated from marine water sample and were primarily screened for biosurfactant production using hemolytic activity method. Among the 20 isolates, six showed positive result for hemolytic activity and those were taken for further secondary screening tests such as oil collapse method, oil spreading method and emulsification method. From the results of secondary screening analysis, two isolates (SIS-3 and SIS-20) were selected and further used to carry out biosurfactant characterization test such as pH, density, surface tension and viscosity determination. Comparing biosurfactant characterization results, SIS-3 was chosen for further analysis and application. FT-IR and GC-MS were carried out for analysis of biosurfactant from isolate SIS-3 and the compound detected was rhamnolipid. The isolate (SIS-3) was identified as Nocardiopsis using 16S rRNA gene sequencing and named as 'Nocardiopsis VITSISB' (KC958579) which was further applied for immobilizing whole cells for engine oil degradation by constructing an aquatic model and using natural products such as soybean meal, sugarcane juice as nutrient source. The oil was efficiently degraded by rhamnolipid producing Nocardiopsis VITSISB (KC958579) within 25 days which indicated that the strain can act as a natural candidate for the bioremediation of oil spill in ocean.

16.
3 Biotech ; 4(6): 591-598, 2014 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-28324307

RESUMO

Marine Bacillus species are potent producers of novel enzymes. Marine Bacillus VITRKHB was observed to be efficient for cellulolytic activity. It was employed for the production of extracellular cellulase. Cellulase was partially purified to 1.6-fold in a stepwise manner by ammonium sulfate precipitation, dialysis, and DEAE ion exchange chromatography. The molecular weight of purified protein was found to be about 33 kDa by SDS-PAGE. Its specific activity was recorded as 1.92 IU/mg. The effect of various carbon and nitrogen sources on cellulase production was investigated. The maximum enzyme activity was recorded in the fermentation media containing xylose as carbon source and beef extract as nitrogen source. The combined interactive effect of different variables on cellulase production was studied by response surface methodology. The optimized combination of variables for maximum enzyme activity was determined as; xylose 5.0 %, beef extract 6.9 %, pH 7.83, NaCl 1.17, and temperature 25.84 °C, after 24 h of incubation.

17.
Asian Pac J Trop Med ; 6(3): 180-7, 2013 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-23375030

RESUMO

OBJECTIVE: To analyze the phytochemical composition and in vitro antioxidant properties of aqueous extract of Aerva lanata (A. lanata) stem. METHODS: During the preliminary phytochemical analysis, the aqueous extract of A. lanata was screened for the presence of carbohydrates, proteins, phenolic compounds, oil and fats, saponins, flavonoids, alkaloids, tannins and phytosterols. Antioxidant activity of the extract was determined by 2, 2-diphenyl-1-picrylhydrazyl radical scavenging activity, metal chelating activity, reducing power activity and DNA damage inhibition activity. Analysis of phenolic compounds was performed by Folin-Ciocalteau reagent method and gradient high performance liquid chromatography technique. RESULTS: Preliminary phytochemical analysis exhibited the presence of phenolic compounds, saponins, flavonoids, tannins and phytosterols as major phytochemical groups. The extract exhibited high 2, 2-diphenyl-1-picrylhydrazyl radical scavenging activity (IC(50)= 110.74 µg/mL), metal chelating activity (IC(50)= 758.17 µg/mL), reducing power activity and DNA damage inhibition efficiency. The extract was reported to possess a high amount of total phenolic content and some of them were identified as gallic acid (3,4,5-OH), apigenin-7-O-glucoside (apigetrin), quercetin-3-O-rutinoside (rutin) and myricetin (3,5,7,3,4,5-OH) by high performance liquid chromatography analysis. The extract was found non toxic towards human erythrocytes in the hemolytic assay (IC(50) = 24.89 mg/mL). CONCLUSIONS: These results conclud that A. lanata stem possesses high antioxidant activity and can be used for the development of natural and safe antioxidant compounds.


Assuntos
Amaranthaceae/química , Antioxidantes/farmacologia , Extratos Vegetais/farmacologia , Caules de Planta/química , Antioxidantes/isolamento & purificação , Compostos de Bifenilo/metabolismo , Quelantes/isolamento & purificação , Cromatografia Líquida de Alta Pressão , Dano ao DNA/efeitos dos fármacos , Eritrócitos/efeitos dos fármacos , Flavonoides/isolamento & purificação , Sequestradores de Radicais Livres/isolamento & purificação , Humanos , Fenóis/isolamento & purificação , Fitosteróis/isolamento & purificação , Picratos/metabolismo , Saponinas/isolamento & purificação , Taninos/isolamento & purificação
18.
Asian Pac J Trop Med ; 6(4): 325-32, 2013 Apr 13.
Artigo em Inglês | MEDLINE | ID: mdl-23608337

RESUMO

OBJECTIVE: To investigate the antioxidant activity of marine actinobacteria. METHODS: The content of total phenolics, the level of antioxidant potential by DPPH radical scavenging activity, metal chelating activity, FRAP method, ß carotene assay and NO scavenging activity in extract were determined. RESULTS: In all the methods the extract exhibited good scavenging activity except NO scavenging activity. The IC(50) values of marine actinobacteria extract on DPPH radical were found to be 41.09 µg/mL. The zone of color retention was 12 mm in ß-carotene bleaching assay. DNA protective efficiency of the extracts was also studied using UV-photolysed H(2)O(2)-driven oxidative damage to pBR322. HPLC analysis identified some of the major phenolic compounds in extracts, which might be responsible for the antioxidant potential and cyto-protection. It showed a 100% cytotoxic effect in brine shrimp lethality assay within 10 mins. The novel actinobacteria was identified as Streptomyces LK-3 (JF710608) through 16S rDNA Sequencing. CONCLUSIONS: The results obtained suggest that the extracts bear anti-cancer metabolites and could be considered as a potential source for anti-cancer drug development.


Assuntos
Antioxidantes/isolamento & purificação , Fenóis/análise , Streptomyces , Animais , Antibacterianos/isolamento & purificação , Antineoplásicos/isolamento & purificação , Antioxidantes/química , Artemia/efeitos dos fármacos , Compostos de Bifenilo/química , Quelantes/química , Quelantes/isolamento & purificação , Cromatografia Líquida de Alta Pressão , Dano ao DNA/efeitos dos fármacos , Indicadores e Reagentes/química , Testes de Sensibilidade Microbiana , Óxido Nítrico/química , Oxirredução/efeitos dos fármacos , Picratos/química , beta Caroteno/química
19.
Asian Pac J Trop Med ; 6(9): 682-8, 2013 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-23827143

RESUMO

OBJECTIVE: To assess the acaricidal activity of titanium dioxide nanoparticles (TiO2 NPs) synthesized from flower aqueous extract of Calotropis gigantea(C. gigantea) against the larvae of Rhipicephalus (Boophilus) microplus [R. (B.) microplus] and the adult of Haemaphysalis bispinosa (H. bispinosa). METHODS: The lyophilized C. gigantea flower aqueous extract of 50 mg was added with 100 mL of TiO(OH)2 (10 mM) and magnetically stirred for 6 h. Synthesized TiO2 NPs were characterized by X-ray diffraction (XRD), Fourier transform infrared spectroscopy (FTIR), Scanning electron microscopy (SEM), and Energy dispersive X-ray spectroscopy (EDX). The synthesised TiO2 NPs were tested against the larvae of R. (B.) microplus and adult of H. bispinosa were exposed to filter paper impregnated method. RESULTS: XRD confirmed the crystalline nature of the nanoparticles with the mean size of 10.52 nm. The functional groups for synthesized TiO2 NPs were 1 405.19, and 1 053.45 cm(-1) for -NH2 bending, primary amines and amides and 1 053.84 and 1 078.45 cm(-1) for C-O. SEM micrographs of the synthesized TiO2 NPs showed the aggregated and spherical in shape. The maximum efficacy was observed in the aqueous flower extract of C. gigantea and synthesized TiO2 NPs against R. (B.) microplus (LC50=24.63 and 5.43 mg/L and r(2)=0.960 and 0.988) and against H. bispinosa (LC50= 35.22 and 9.15 mg/L and r(2) = 0.969 and 0.969), respectively. CONCLUSIONS: The synthesized TiO2 NPs were highly stable and had significant acaricidal activity against the larvae of R. (B.) microplus and adult of H. bispinosa. This study provides the first report of synthesized TiO2 NPs and possessed excellent anti-parasitic activity.


Assuntos
Acaricidas/farmacologia , Calotropis/química , Ixodidae/efeitos dos fármacos , Nanopartículas Metálicas/química , Extratos Vegetais/farmacologia , Rhipicephalus/efeitos dos fármacos , Titânio/farmacologia , Acaricidas/síntese química , Acaricidas/química , Animais , Feminino , Flores/química , Ixodidae/crescimento & desenvolvimento , Masculino , Tamanho da Partícula , Extratos Vegetais/química , Rhipicephalus/crescimento & desenvolvimento , Titânio/química
20.
Braz. arch. biol. technol ; 58(4): 628-635, Jul-Aug/2015. tab, graf
Artigo em Inglês | LILACS | ID: lil-753948

RESUMO

The present study was conducted for the isolation of potential bacteria from the desert soil, their molecular identification and prediction of restriction sites of the potential isolate using the bioinformatics tools. Production of the metabolites was done by inoculating in nutrient broth of pH 8.6. Metabolite was bluish-green in color; it was extracted and dried by using methanol and used for partial characterization by using GC-MS spectroscopy. Antibacterial activity was performed with the clinical human pathogenic isolates. The bacterium was identified as Pseudomonas sp. JJTBVK on the basis of 16S rRNA sequencing. The sequence was analyzed for the restriction cleavage sites, which showed that the sequence had various restriction sites for different enzymes. Antibacterial activity (MIC) of methanol extract of the bacterial culture broth showed antibacterial activity (MIC), which was 29, 30, 30 and 29 mm for Pseudomonas aeruginosa, Staphylococcus aureus, Bacillus subtilis and Salmonella typhi, respectively. GC-MS analysis of the methanol extract showed the presence of naphth [2,3-B] azet-2 (1H) -one, 1-phenyl-, which was the characteristic compound showing the antibacterial activity.

SELEÇÃO DE REFERÊNCIAS
DETALHE DA PESQUISA