Detalhe da pesquisa
1.
MiCoP: microbial community profiling method for detecting viral and fungal organisms in metagenomic samples.
BMC Genomics
; 20(Suppl 5): 423, 2019 Jun 06.
Artigo
em Inglês
| MEDLINE | ID: mdl-31167634
2.
Repeat-aware evaluation of scaffolding tools.
Bioinformatics
; 34(15): 2530-2537, 2018 08 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-29547882
3.
QUENTIN: reconstruction of disease transmissions from viral quasispecies genomic data.
Bioinformatics
; 34(1): 163-170, 2018 01 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-29304222
4.
Fast bootstrapping-based estimation of confidence intervals of expression levels and differential expression from RNA-Seq data.
Bioinformatics
; 33(20): 3302-3304, 2017 Oct 15.
Artigo
em Inglês
| MEDLINE | ID: mdl-28605502
5.
Inferring metabolic pathway activity levels from RNA-Seq data.
BMC Genomics
; 17 Suppl 5: 542, 2016 08 31.
Artigo
em Inglês
| MEDLINE | ID: mdl-27585456
6.
ScaffMatch: scaffolding algorithm based on maximum weight matching.
Bioinformatics
; 31(16): 2632-8, 2015 Aug 15.
Artigo
em Inglês
| MEDLINE | ID: mdl-25890305
7.
Comparative transcriptome analysis of Peromyscus leucopus and C3H mice infected with the Lyme disease pathogen.
Front Cell Infect Microbiol
; 13: 1115350, 2023.
Artigo
em Inglês
| MEDLINE | ID: mdl-37113133
8.
In vitro atlas of dorsal spinal interneurons reveals Wnt signaling as a critical regulator of progenitor expansion.
Cell Rep
; 40(3): 111119, 2022 07 19.
Artigo
em Inglês
| MEDLINE | ID: mdl-35858555
9.
Single Cell Transcriptomic Analyses Reveal the Impact of bHLH Factors on Human Retinal Organoid Development.
Front Cell Dev Biol
; 9: 653305, 2021.
Artigo
em Inglês
| MEDLINE | ID: mdl-34055784
10.
Pipeline for Analyzing Activity of Metabolic Pathways in Planktonic Communities Using Metatranscriptomic Data.
J Comput Biol
; 28(8): 842-855, 2021 08.
Artigo
em Inglês
| MEDLINE | ID: mdl-34264744
11.
BATMAN: Fast and Accurate Integration of Single-Cell RNA-Seq Datasets via Minimum-Weight Matching.
iScience
; 23(6): 101185, 2020 Jun 26.
Artigo
em Inglês
| MEDLINE | ID: mdl-32504875
12.
Rrp6 Moonlights in an RNA Exosome-Independent Manner to Promote Cell Survival and Gene Expression during Stress.
Cell Rep
; 31(10): 107754, 2020 06 09.
Artigo
em Inglês
| MEDLINE | ID: mdl-32521279
13.
Optimized design of single-cell RNA sequencing experiments for cell-type-specific eQTL analysis.
Nat Commun
; 11(1): 5504, 2020 10 30.
Artigo
em Inglês
| MEDLINE | ID: mdl-33127880
14.
Author Correction: Profiling immunoglobulin repertoires across multiple human tissues using RNA sequencing.
Nat Commun
; 11(1): 4499, 2020 09 04.
Artigo
em Inglês
| MEDLINE | ID: mdl-32887888
15.
Profiling immunoglobulin repertoires across multiple human tissues using RNA sequencing.
Nat Commun
; 11(1): 3126, 2020 06 19.
Artigo
em Inglês
| MEDLINE | ID: mdl-32561710
16.
Benchmarking of computational error-correction methods for next-generation sequencing data.
Genome Biol
; 21(1): 71, 2020 03 17.
Artigo
em Inglês
| MEDLINE | ID: mdl-32183840