Detalhe da pesquisa
1.
Unravelling the collateral damage of antibiotics on gut bacteria.
Nature
; 599(7883): 120-124, 2021 11.
Artigo
em Inglês
| MEDLINE | ID: mdl-34646011
2.
Molecular biology for green recovery-A call for action.
PLoS Biol
; 20(4): e3001623, 2022 04.
Artigo
em Inglês
| MEDLINE | ID: mdl-35452449
3.
Unravelling metabolic cross-feeding in a yeast-bacteria community using 13 C-based proteomics.
Mol Syst Biol
; 19(4): e11501, 2023 04 12.
Artigo
em Inglês
| MEDLINE | ID: mdl-36779294
4.
Extensive impact of non-antibiotic drugs on human gut bacteria.
Nature
; 555(7698): 623-628, 2018 03 29.
Artigo
em Inglês
| MEDLINE | ID: mdl-29555994
5.
Bioactivity assessment of natural compounds using machine learning models trained on target similarity between drugs.
PLoS Comput Biol
; 18(4): e1010029, 2022 04.
Artigo
em Inglês
| MEDLINE | ID: mdl-35468126
6.
Towards a mechanistic understanding of reciprocal drug-microbiome interactions.
Mol Syst Biol
; 17(3): e10116, 2021 03.
Artigo
em Inglês
| MEDLINE | ID: mdl-33734582
7.
Adaptive laboratory evolution of microbial co-cultures for improved metabolite secretion.
Mol Syst Biol
; 17(8): e10189, 2021 08.
Artigo
em Inglês
| MEDLINE | ID: mdl-34370382
8.
Fast automated reconstruction of genome-scale metabolic models for microbial species and communities.
Nucleic Acids Res
; 46(15): 7542-7553, 2018 09 06.
Artigo
em Inglês
| MEDLINE | ID: mdl-30192979
9.
Antibiotics-induced monodominance of a novel gut bacterial order.
Gut
; 68(10): 1781-1790, 2019 10.
Artigo
em Inglês
| MEDLINE | ID: mdl-30658995
10.
Yeast Genome-Scale Metabolic Models for Simulating Genotype-Phenotype Relations.
Prog Mol Subcell Biol
; 58: 111-133, 2019.
Artigo
em Inglês
| MEDLINE | ID: mdl-30911891
11.
Conjugative transposition of the vancomycin resistance carrying Tn1549: enzymatic requirements and target site preferences.
Mol Microbiol
; 107(5): 639-658, 2018 03.
Artigo
em Inglês
| MEDLINE | ID: mdl-29271522
12.
Metabolic models and gene essentiality data reveal essential and conserved metabolism in prokaryotes.
PLoS Comput Biol
; 14(11): e1006556, 2018 11.
Artigo
em Inglês
| MEDLINE | ID: mdl-30444863
13.
Laboratory evolution reveals regulatory and metabolic trade-offs of glycerol utilization in Saccharomyces cerevisiae.
Metab Eng
; 47: 73-82, 2018 05.
Artigo
em Inglês
| MEDLINE | ID: mdl-29534903
14.
Metabolic dependencies drive species co-occurrence in diverse microbial communities.
Proc Natl Acad Sci U S A
; 112(20): 6449-54, 2015 May 19.
Artigo
em Inglês
| MEDLINE | ID: mdl-25941371
15.
Metabolic anchor reactions for robust biorefining.
Metab Eng
; 40: 1-4, 2017 03.
Artigo
em Inglês
| MEDLINE | ID: mdl-28232136
16.
Integration of Biomass Formulations of Genome-Scale Metabolic Models with Experimental Data Reveals Universally Essential Cofactors in Prokaryotes.
Metab Eng
; 39: 200-208, 2017 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-27939572
17.
Contribution of network connectivity in determining the relationship between gene expression and metabolite concentration changes.
PLoS Comput Biol
; 10(4): e1003572, 2014 Apr.
Artigo
em Inglês
| MEDLINE | ID: mdl-24762675
18.
High-throughput anaerobic screening for identifying compounds acting against gut bacteria in monocultures or communities.
Nat Protoc
; 19(3): 668-699, 2024 Mar.
Artigo
em Inglês
| MEDLINE | ID: mdl-38092943
19.
Vitamin D regulates microbiome-dependent cancer immunity.
Science
; 384(6694): 428-437, 2024 Apr 26.
Artigo
em Inglês
| MEDLINE | ID: mdl-38662827
20.
Random sampling of elementary flux modes in large-scale metabolic networks.
Bioinformatics
; 28(18): i515-i521, 2012 Sep 15.
Artigo
em Inglês
| MEDLINE | ID: mdl-22962475