Detalhe da pesquisa
1.
Increased peak detection accuracy in over-dispersed ChIP-seq data with supervised segmentation models.
BMC Bioinformatics
; 22(1): 323, 2021 Jun 14.
Artigo
em Inglês
| MEDLINE | ID: mdl-34126932
2.
Wide cross-species RNA-Seq comparison reveals convergent molecular mechanisms involved in nickel hyperaccumulation across dicotyledons.
New Phytol
; 229(2): 994-1006, 2021 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-32583438
3.
Full Length Transcriptome Highlights the Coordination of Plastid Transcript Processing.
Int J Mol Sci
; 22(20)2021 Oct 19.
Artigo
em Inglês
| MEDLINE | ID: mdl-34681956
4.
Fast tree aggregation for consensus hierarchical clustering.
BMC Bioinformatics
; 21(1): 120, 2020 Mar 20.
Artigo
em Inglês
| MEDLINE | ID: mdl-32197576
5.
Synthetic data sets for the identification of key ingredients for RNA-seq differential analysis.
Brief Bioinform
; 19(1): 65-76, 2018 01 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-27742662
6.
Two interacting PPR proteins are major Arabidopsis editing factors in plastid and mitochondria.
Proc Natl Acad Sci U S A
; 114(33): 8877-8882, 2017 08 15.
Artigo
em Inglês
| MEDLINE | ID: mdl-28760958
7.
Independent introductions and admixtures have contributed to adaptation of European maize and its American counterparts.
PLoS Genet
; 13(3): e1006666, 2017 03.
Artigo
em Inglês
| MEDLINE | ID: mdl-28301472
8.
Allele-specific expression and genetic determinants of transcriptomic variations in response to mild water deficit in tomato.
Plant J
; 96(3): 635-650, 2018 11.
Artigo
em Inglês
| MEDLINE | ID: mdl-30079488
9.
Screening populations for copy number variation using genotyping-by-sequencing: a proof of concept using soybean fast neutron mutants.
BMC Genomics
; 20(1): 634, 2019 Aug 06.
Artigo
em Inglês
| MEDLINE | ID: mdl-31387530
10.
Homoeologous exchanges cause extensive dosage-dependent gene expression changes in an allopolyploid crop.
New Phytol
; 217(1): 367-377, 2018 Jan.
Artigo
em Inglês
| MEDLINE | ID: mdl-29034956
11.
Performance evaluation of DNA copy number segmentation methods.
Brief Bioinform
; 16(4): 600-15, 2015 Jul.
Artigo
em Inglês
| MEDLINE | ID: mdl-25202135
12.
GEM2Net: from gene expression modeling to -omics networks, a new CATdb module to investigate Arabidopsis thaliana genes involved in stress response.
Nucleic Acids Res
; 43(Database issue): D1010-7, 2015 Jan.
Artigo
em Inglês
| MEDLINE | ID: mdl-25392409
13.
Unraveling the early molecular and physiological mechanisms involved in response to phenanthrene exposure.
BMC Genomics
; 17(1): 818, 2016 10 21.
Artigo
em Inglês
| MEDLINE | ID: mdl-27769163
14.
SegAnnDB: interactive Web-based genomic segmentation.
Bioinformatics
; 30(11): 1539-46, 2014 Jun 01.
Artigo
em Inglês
| MEDLINE | ID: mdl-24493034
15.
Identifying subgroup markers in heterogeneous populations.
Nucleic Acids Res
; 41(21): e200, 2013 Nov.
Artigo
em Inglês
| MEDLINE | ID: mdl-24062158
16.
A regression model for estimating DNA copy number applied to capture sequencing data.
Bioinformatics
; 28(18): 2357-65, 2012 Sep 15.
Artigo
em Inglês
| MEDLINE | ID: mdl-22796958
17.
DiffSegR: an RNA-seq data driven method for differential expression analysis using changepoint detection.
NAR Genom Bioinform
; 5(4): lqad098, 2023 Dec.
Artigo
em Inglês
| MEDLINE | ID: mdl-37954572
18.
Joint segmentation, calling, and normalization of multiple CGH profiles.
Biostatistics
; 12(3): 413-28, 2011 Jul.
Artigo
em Inglês
| MEDLINE | ID: mdl-21209153
19.
Strive or thrive: Trends in Phytophthora capsici gene expression in partially resistant pepper.
Front Plant Sci
; 13: 980587, 2022.
Artigo
em Inglês
| MEDLINE | ID: mdl-36479518
20.
Genome-Wide Identification of Key Components of RNA Silencing in Two Phaseolus vulgaris Genotypes of Contrasting Origin and Their Expression Analyses in Response to Fungal Infection.
Genes (Basel)
; 13(1)2021 12 27.
Artigo
em Inglês
| MEDLINE | ID: mdl-35052407