Pesquisa | Biblioteca Virtual em Saúde Fiocruz

1.

NF-κB subunits direct kinetically distinct transcriptional cascades in antigen receptor-activated B cells.

Zhao, Mingming; Chauhan, Prashant; Sherman, Cheryl A; Singh, Amit; Kaileh, Mary; Mazan-Mamczarz, Krystyna; Ji, Hongkai; Joy, Jaimy; Nandi, Satabdi; De, Supriyo; Zhang, Yongqing; Fan, Jinshui; Becker, Kevin G; Loke, Png; Zhou, Weiqiang; Sen, Ranjan.

Nat Immunol ; 24(9): 1552-1564, 2023 09.

Artigo em Inglês | MEDLINE | ID: mdl-37524800

2.

Phage display of environmental protein toxins and virulence factors reveals the prevalence, persistence, and genetics of antibody responses.

Angkeow, Julia W; Monaco, Daniel R; Chen, Athena; Venkataraman, Thiagarajan; Jayaraman, Sahana; Valencia, Cristian; Sie, Brandon M; Liechti, Thomas; Farhadi, Payam N; Funez-dePagnier, Gabriela; Sherman-Baust, Cheryl A; Wong, May Q; Ruczinski, Ingo; Caturegli, Patrizio; Sears, Cynthia L; Simner, Patricia J; Round, June L; Duggal, Priya; Laserson, Uri; Steiner, Theodore S; Sen, Ranjan; Lloyd, Thomas E; Roederer, Mario; Mammen, Andrew L; Longman, Randy S; Rider, Lisa G; Larman, H Benjamin.

Immunity ; 55(6): 1051-1066.e4, 2022 06 14.

Artigo em Inglês | MEDLINE | ID: mdl-35649416

3.

DNA methylation signatures reveal that distinct combinations of transcription factors specify human immune cell epigenetic identity.

Roy, Roshni; Ramamoorthy, Senthilkumar; Shapiro, Benjamin D; Kaileh, Mary; Hernandez, Dena; Sarantopoulou, Dimitra; Arepalli, Sampath; Boller, Sören; Singh, Amit; Bektas, Arsun; Kim, Jaekwan; Moore, Ann Zenobia; Tanaka, Toshiko; McKelvey, Julia; Zukley, Linda; Nguyen, Cuong; Wallace, Tonya; Dunn, Christopher; Wersto, Robert; Wood, William; Piao, Yulan; Becker, Kevin G; Coletta, Christopher; De, Supriyo; Sen, Jyoti Misra; Battle, Alexis; Weng, Nan-Ping; Grosschedl, Rudolf; Ferrucci, Luigi; Sen, Ranjan.

Immunity ; 54(11): 2465-2480.e5, 2021 11 09.

Artigo em Inglês | MEDLINE | ID: mdl-34706222

4.

Architectural protein subclasses shape 3D organization of genomes during lineage commitment.

Phillips-Cremins, Jennifer E; Sauria, Michael E G; Sanyal, Amartya; Gerasimova, Tatiana I; Lajoie, Bryan R; Bell, Joshua S K; Ong, Chin-Tong; Hookway, Tracy A; Guo, Changying; Sun, Yuhua; Bland, Michael J; Wagstaff, William; Dalton, Stephen; McDevitt, Todd C; Sen, Ranjan; Dekker, Job; Taylor, James; Corces, Victor G.

Cell ; 153(6): 1281-95, 2013 Jun 06.

Artigo em Inglês | MEDLINE | ID: mdl-23706625

5.

The dynamic changes in cytokine responses in COVID-19: a snapshot of the current state of knowledge.

Buszko, Maja; Park, Jung-Hyun; Verthelyi, Daniela; Sen, Ranjan; Young, Howard A; Rosenberg, Amy S.

Nat Immunol ; 21(10): 1146-1151, 2020 10.

Artigo em Inglês | MEDLINE | ID: mdl-32855555

6.

Transcription, splicing, and release: are we there yet?

Sen, Ranjan; Fugmann, Sebastian D.

Cell ; 150(2): 241-3, 2012 Jul 20.

Artigo em Inglês | MEDLINE | ID: mdl-22817885

7.

DNA methylation signatures reveal that distinct combinations of transcription factors specify human immune cell epigenetic identity.

Roy, Roshni; Ramamoorthy, Senthilkumar; Shapiro, Benjamin D; Kaileh, Mary; Hernandez, Dena; Sarantopoulou, Dimitra; Arepalli, Sampath; Boller, Sö Ren; Singh, Amit; Bektas, Arsun; Kim, Jaekwan; Moore, Ann Zenobia; Tanaka, Toshiko; McKelvey, Julia; Zukley, Linda; Nguyen, Cuong; Wallace, Tonya; Dunn, Christopher; Wersto, Robert; Wood, William; Piao, Yulan; Becker, Kevin G; Coletta, Christopher; De, Supriyo; Sen, Jyoti Misra; Battle, Alexis; Weng, Nan-Ping; Grosschedl, Rudolf; Ferrucci, Luigi; Sen, Ranjan.

Immunity ; 55(6): 1135, 2022 Jun 14.

Artigo em Inglês | MEDLINE | ID: mdl-35704994

8.

Two forms of loops generate the chromatin conformation of the immunoglobulin heavy-chain gene locus.

Guo, Changying; Gerasimova, Tatiana; Hao, Haiping; Ivanova, Irina; Chakraborty, Tirtha; Selimyan, Roza; Oltz, Eugene M; Sen, Ranjan.

Cell ; 147(2): 332-43, 2011 Oct 14.

Artigo em Inglês | MEDLINE | ID: mdl-21982154

9.

Sequential Enhancer Sequestration Dysregulates Recombination Center Formation at the IgH Locus.

Qiu, Xiang; Kumari, Gita; Gerasimova, Tatiana; Du, Hansen; Labaran, Lawal; Singh, Amit; De, Supriyo; Wood, William H; Becker, Kevin G; Zhou, Weiqiang; Ji, Hongkai; Sen, Ranjan.

Mol Cell ; 70(1): 21-33.e6, 2018 04 05.

Artigo em Inglês | MEDLINE | ID: mdl-29576529

10.

A Pioneer's Tail.

Sen, Ranjan.

Immunity ; 44(3): 516-518, 2016 Mar 15.

Artigo em Inglês | MEDLINE | ID: mdl-26982358

11.

Postmitotic G1 phase survivin drives mitogen-independent cell division of B lymphocytes.

Singh, Amit; Spitzer, Matthew H; Joy, Jaimy P; Kaileh, Mary; Qiu, Xiang; Nolan, Garry P; Sen, Ranjan.

Proc Natl Acad Sci U S A ; 119(18): e2115567119, 2022 05 03.

Artigo em Inglês | MEDLINE | ID: mdl-35476510

12.

Peptides designed from a bacteriophage capsid protein function as synthetic transcription repressors.

Sharma, Pankaj V; Jain, Sriyans; Sen, Ranjan.

J Biol Chem ; 299(12): 105373, 2023 Dec.

Artigo em Inglês | MEDLINE | ID: mdl-37865318

13.

Localized epigenetic changes induced by DH recombination restricts recombinase to DJH junctions.

Subrahmanyam, Ramesh; Du, Hansen; Ivanova, Irina; Chakraborty, Tirtha; Ji, Yanhong; Zhang, Yu; Alt, Frederick W; Schatz, David G; Sen, Ranjan.

Nat Immunol ; 13(12): 1205-12, 2012 Dec.

Artigo em Inglês | MEDLINE | ID: mdl-23104096

14.

Evolving adaptive immunity.

Lovely, Geoffrey A; Sen, Ranjan.

Genes Dev ; 30(8): 873-5, 2016 Apr 15.

Artigo em Inglês | MEDLINE | ID: mdl-27083993

15.

In vivo regulation of bacterial Rho-dependent transcription termination by the nascent RNA.

Chhakchhuak, Passong Immanual R; Sen, Ranjan.

J Biol Chem ; 298(6): 102001, 2022 06.

Artigo em Inglês | MEDLINE | ID: mdl-35500654

16.

A structural hierarchy mediated by multiple nuclear factors establishes IgH locus conformation.

Gerasimova, Tatiana; Guo, Changying; Ghosh, Amalendu; Qiu, Xiang; Montefiori, Lindsey; Verma-Gaur, Jiyoti; Choi, Nancy M; Feeney, Ann J; Sen, Ranjan.

Genes Dev ; 29(16): 1683-95, 2015 Aug 15.

Artigo em Inglês | MEDLINE | ID: mdl-26302788

17.

Design of novel peptide inhibitors against the conserved bacterial transcription terminator, Rho.

Ghosh, Gairika; Sharma, Pankaj V; Kumar, Amit; Jain, Sriyans; Sen, Ranjan.

J Biol Chem ; 296: 100653, 2021.

Artigo em Inglês | MEDLINE | ID: mdl-33845047

18.

Rho Protein: Roles and Mechanisms.

Mitra, Pallabi; Ghosh, Gairika; Hafeezunnisa, Md; Sen, Ranjan.

Annu Rev Microbiol ; 71: 687-709, 2017 09 08.

Artigo em Inglês | MEDLINE | ID: mdl-28731845

19.

Multimode Mamyshev oscillator.

Haig, Henry; Sidorenko, Pavel; Dhar, Anirban; Choudhury, Nilotpal; Sen, Ranjan; Christodoulides, Demetrios; Wise, Frank.

Opt Lett ; 47(1): 46-49, 2022 Jan 01.

Artigo em Inglês | MEDLINE | ID: mdl-34951879

20.

YY1 control of mitochondrial-related genes does not account for regulation of immunoglobulin class switch recombination in mice.

Nandi, Satabdi; Liang, Guanxiang; Sindhava, Vishal; Angireddy, Rajesh; Basu, Arindam; Banerjee, Sarmistha; Hodawadekar, Suchita; Zhang, Yue; Avadhani, Narayan G; Sen, Ranjan; Atchison, Michael L.

Eur J Immunol ; 50(6): 822-838, 2020 06.

Artigo em Inglês | MEDLINE | ID: mdl-32092784

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NF-κB subunits direct kinetically distinct transcriptional cascades in antigen receptor-activated B cells.

Phage display of environmental protein toxins and virulence factors reveals the prevalence, persistence, and genetics of antibody responses.

DNA methylation signatures reveal that distinct combinations of transcription factors specify human immune cell epigenetic identity.

Architectural protein subclasses shape 3D organization of genomes during lineage commitment.

The dynamic changes in cytokine responses in COVID-19: a snapshot of the current state of knowledge.

Transcription, splicing, and release: are we there yet?

DNA methylation signatures reveal that distinct combinations of transcription factors specify human immune cell epigenetic identity.

Two forms of loops generate the chromatin conformation of the immunoglobulin heavy-chain gene locus.

Sequential Enhancer Sequestration Dysregulates Recombination Center Formation at the IgH Locus.

A Pioneer's Tail.

Postmitotic G1 phase survivin drives mitogen-independent cell division of B lymphocytes.

Peptides designed from a bacteriophage capsid protein function as synthetic transcription repressors.

Localized epigenetic changes induced by DH recombination restricts recombinase to DJH junctions.

Evolving adaptive immunity.

In vivo regulation of bacterial Rho-dependent transcription termination by the nascent RNA.

A structural hierarchy mediated by multiple nuclear factors establishes IgH locus conformation.

Design of novel peptide inhibitors against the conserved bacterial transcription terminator, Rho.

Rho Protein: Roles and Mechanisms.

Multimode Mamyshev oscillator.

YY1 control of mitochondrial-related genes does not account for regulation of immunoglobulin class switch recombination in mice.