Disentangling the Conformational Space and Structural Preferences of Tetrahydrofurfuryl Alcohol Using Rotational Spectroscopy and Computational Chemistry.

The influence of the hydroxymethyl (CH2OH) group on the tetrahydrofuran (THF) ring structure was investigated by disentangling the gas phase conformational landscape of the sugar analogue tetrahydrofurfuryl alcohol (THFA). By combining rotational spectroscopy (6-20 GHz) and quantum chemical calculations, transitions corresponding to two stable conformers of THFA and their 13C isotopologues were observed and assigned in the rotational spectrum. The positions of the C atoms were precisely determined to unambiguously distinguish between nearly isoenergetic pairs of conformers that differ in their ring configurations: envelope (E) versus twist (T). The rotational spectrum confirms that the E ring geometry is favoured when the CH2OH fragment lies gauche (-) to the THF backbone (OCCO ~-60°) whereas the T form is more stable for the gauche (+) alignment of the substituent (OCCO ~+60°). The observed spectral intensities suggest that conformational relaxation of the THF geometry (E↔T) to the more stable form readily occurs within the pairs of g- and g+ conformers which is consistent with the low barriers (1.5-1.7 kJ mol-1) for conversion determined via transition state calculations. Insights into the intramolecular hydrogen bonding and other weak interactions stabilizing the lowest energy structures of THFA were derived and rationalized using non-covalent interaction analyses.

Hyperfine-resolved rotational spectroscopy of HCNH.

The rotational spectrum of the molecular ion HCNH+ is revisited using double-resonance spectroscopy in an ion trap apparatus, with six transitions measured between 74 and 445 GHz. Due to the cryogenic temperature of the trap, the hyperfine splittings caused by the 14N quadrupolar nucleus were resolved for transitions up to J = 4 ← 3, allowing for a refinement of the spectroscopic parameters previously reported, especially the quadrupole coupling constant eQq.

Exploring the conformational landscape, hydrogen bonding, and internal dynamics in the diallyl ether and diallyl sulfide monohydrates.

The conformational spaces of the diallyl ether (DAE) and diallyl sulfide (DAS) monohydrates were explored using rotational spectroscopy from 6 to 19 GHz. Calculations at the B3LYP-D3(BJ)/aug-cc-pVTZ level suggested significant differences in their conformational behavior, with DAE-w exhibiting 22 unique conformers and DAS-w featuring three stable structures within 6 kJ mol-1. However, only transitions from the lowest energy conformer of each were experimentally observed. Spectral analysis confirmed that binding with water does not alter the conformational preference for the lowest energy structure of the monomers, but it does influence the relative stabilities of all other conformers, particularly in the case of DAE. Non-covalent interaction and quantum theory of atoms in molecules analyses showed that the observed conformer for each complex is stabilized by two intermolecular hydrogen bonds (HBs), where water primarily interacts with the central oxygen or sulfur atom of the diallyl compounds, along with secondary interactions involving the allyl groups. The nature of these interactions was further elucidated using symmetry-adapted perturbation theory, which suggests that the primary HB interaction with S in DAS is weaker and more dispersive in nature compared to the primary HB in DAE. This supports the experimental observation of a tunneling splitting exclusively in the rotational spectrum of DAS-w, as the weaker contact allows water to undergo internal motions within the complex, as shown based on calculated transition state structures for possible tunneling pathways.

High-resolution rovibrational and rotational spectroscopy of the singly deuterated cyclopropenyl cation, c-C3H2D.

Applying a novel action spectroscopic technique in a 4 K cryogenic ion-trap instrument, the molecule c-C3H2D+ has been investigated by high-resolution rovibrational and pure rotational spectroscopy for the first time. In total, 126 rovibrational transitions within the fundamental band of the ν1 symmetric C-H stretch were measured with a band origin centred at 3168.565 cm-1, which were used to predict pure rotational transition frequencies in the ground vibrational state. Based on these predictions, 16 rotational transitions were observed between 90 and 230 GHz by using a double-resonance scheme. These new measurements will enable the first radio-astronomical search for c-C3H2D+.

Dramatic differences in the conformational equilibria of chalcogen-bridged compounds: the case of diallyl ether versus diallyl sulfide.

The conformational landscapes of diallyl ether (DAE) and diallyl sulfide (DAS) were investigated for the first time using rotational spectroscopy from 6-20 GHz supported by quantum mechanical calculations. A significant difference in the conformational distribution of these chalcogen-bridged compounds is predicted by theory at the B3LYP-D3(BJ)/aug-cc-pVTZ level as DAS has only one low energy conformer while DAE has up to 12 energy minima within 5 kJ mol-1. This was confirmed by rotational spectroscopy as only transitions corresponding to the global minimum of DAS were observed while the spectrum of DAE was much richer and composed of features from the nine lowest energy conformers. To understand the effects that govern the conformational preferences of DAE and DAS, natural bond orbital and non-covalent interaction analyses were done. These show that unique orbital interactions stabilize several conformers of the ether making its conformational landscape more competitive than that of the sulfide. This is consistent with a bonding model involving decreased hybridization of the bridging atom as one moves down the periodic table which is confirmed by the experimental ground state structures of the lowest energy forms of DAE and DAS, derived using spectra of the 13C and 34S substituted species in natural abundance.

Exploring the non-covalent interactions behind the formation of amine-water complexes: the case of N-allylmethylamine monohydrate.

The conformational landscape of the monohydrated complex of N-allylmethylamine (AMA-w) was investigated for the first time using rotational spectroscopy from 8-20 GHz and quantum chemistry calculations. From a total of nine possible energy minima within 10 kJ mol-1, transitions for the two most stable conformers of AMA-w were detected, and assigned aided by DFT and ab initio MP2 predictions. The observed rotational transitions displayed characteristic hyperfine splittings due to the presence of the 14N quadrupolar nucleus. Quantum theory of atoms in molecules (QTAIM), non-covalent interaction (NCI) and natural bond orbital (NBO) analyses showed that the observed conformers of AMA-w are stabilized by two intermolecular interactions consisting of a dominant NH-O and a secondary C-HO hydrogen bond (HB) in which the water molecule acts simultaneously as a HB donor and acceptor. The HBs formed with water do not change the relative energy ordering of the most stable conformers of AMA but do affect the stability of higher energy conformations by disrupting the intramolecular forces responsible for their geometries. By comparing the intermolecular interaction energies with those of the monohydrates of the simplest primary (methylamine, MA), secondary (dimethylamine, DMA) and tertiary (trimethylamine, TMA) amines using symmetry-adapted perturbation theory (SAPT) calculations, we find that AMA forms the strongest bound complex with water. This is rationalized through the identification of subtle differences in stabilizing and destabilizing contributions across the amine-w series of complexes.

Characterization of Large-Amplitude Motions and Hydrogen Bonding Interactions in the Thiophene-Water Complex by Rotational Spectroscopy.

The rotational fingerprint of the thiophene-water complex was investigated for the first time using Fourier transform microwave spectroscopy (7-20 GHz) aided by quantum mechanical calculations. Transitions for a single species were observed, and the rotational constants for the parent and 18O isotopomers are consistent with a geometry that is highly averaged over a barrierless large-amplitude motion of water that interconverts two equivalent forms corresponding to the global minimum (B2PLYP-D3(BJ)/def2-TZVP). In this effective geometry, the water lies above the thiophene ring close to its σv plane of symmetry. The observed transitions are split by a second water-centered tunneling motion that exchanges its two protons by internal rotation about its C2 axis with a calculated barrier of ∼2.7 kJ mol-1 (B2PLYP-D3(BJ)/def2-TZVP). Based on quantum theory of atoms in molecules, noncovalent interaction, and symmetry-adapted perturbation theory analyses, the observed geometry enables two intermolecular interactions (O-H···π and O-H···S) whose electrostatic and dispersive contributions favor formation of the thiophene-water complex.

Hydrogen bonding networks and cooperativity effects in the aqueous solvation of trimethylene oxide and sulfide rings by microwave spectroscopy and computational chemistry.

The intermolecular interactions responsible for the microsolvation of the highly flexible trimethylene oxide (TMO) and trimethylene sulfide (TMS) rings with one and two water (w) molecules were investigated using rotational spectroscopy (8-22 GHz) and quantum chemical calculations. The observed patterns of transitions are consistent with the most stable geometries of the TMO-w, TMO-(w)2, and TMS-w complexes at the B2PLYP-D3(BJ)/aug-cc-pVTZ level and were confirmed using spectra of the 18O isotopologue. Due to its effectively planar backbone, TMO offers one unique binding site for solvation, while water can bind to the puckered TMS ring in either an axial or equatorial site of the heteroatom. In all clusters, the first water molecule binds in the σv symmetry plane of the ring monomer and serves as a hydrogen bond donor to the heteroatom. The second water molecule is predicted to form a cooperative hydrogen bonding network between the three moieties. Secondary C-H⋯O interactions are a key stabilizing influence in trimers and also drive the preferred binding site in the TMS clusters with the axial binding site preferred in TMS-w and the equatorial form calculated to be more stable in the dihydrate. Using an energy partition scheme from the symmetry-adapted perturbation theory for the O, S, and Se containing mono- and dihydrates, the intermolecular interactions are revealed to be mainly electrostatic, but the dispersive character of the contacts is enhanced with the increasing size of the ring's heteroatom due to the key role of longer-range secondary interactions.

Conformational preferences of diallylamine: A rotational spectroscopic and theoretical study.

The conformational space of diallylamine (DAA) was investigated using rotational spectroscopy from 7 to 19 GHz aided by quantum chemical calculations. Extensive conformational searches using density functional theory B3LYP-D3(BJ) and the ab initio MP2 method with the aug-cc-pVTZ basis set identified a total of 42 minima for DAA within ∼22 kJ mol-1. This reveals a strikingly rich conformational landscape for this secondary amine with two equivalent substituents. Experimentally, transitions belonging to four low energy conformers (I, II, III, and IV) were unequivocally assigned in the rotational spectrum, and their patterns were confirmed by the presence of the hyperfine structure owing to the 14N quadrupolar nucleus. The relative intensities of the observed transitions suggest a conformational energy ordering of I < II < III < IV. Natural bond orbital and non-covalent interaction calculations reveal that the geometric preferences for the observed conformers are governed by an interplay of subtle attractive interactions (including hyperconjugation involving the lone pair at nitrogen) and repulsive effects.

Targeting the Rich Conformational Landscape of N-Allylmethylamine Using Rotational Spectroscopy and Quantum Mechanical Calculations.

The highly variable conformational landscape of N-allylmethylamine (AMA) was investigated using Fourier transform microwave spectroscopy aided by high-level theoretical calculations to understand the energy relationship governing the interconversion between nine stable conformers. Spectroscopically, transitions belonging to four low energy conformers were identified and their hyperfine patterns owing to the 14 N quadrupolar nucleus were unambiguously resolved. The rotational spectrum of the global minimum geometry, conformer I, shows an additional splitting associated with a tunneling motion through an energy barrier interconnecting its enantiomeric forms. A two-step tunneling trajectory is proposed by finding transition state structures corresponding to the allyl torsion and NH inversion. Natural bond orbital and non-covalent interaction analyses reveal that an interplay between steric and hyperconjugative effects rules the conformational preferences of AMA.