RESUMO
The electronic structures of FeFe-cofactors (FeFe-cos) in resting and turnover states, together with their PN clusters from iron-only nitrogenases, have been calculated using the bond valence method, and their crystallographic data were reported recently and deposited in the Protein Data Bank (PDB codes: 8BOQ and 8OIE). The calculated results have also been compared with those of their homologous Mo- and V-nitrogenases. For FeFe-cos in the resting state, Fe1/2/4/5/6/7/8 atoms are prone to Fe3+, while the Fe3 atom shows different degrees of mixed valences. The results support that the Fe8 atom at the terminal positions of FeFe-cos possesses the same oxidation states as the Mo3+/V3+ atoms of FeMo-/FeV-cos. In the turnover state, the overall oxidation state of FeFe-co is slightly reduced than those in the resting species, and its electronic configuration is rearranged after the substitution of S2B with OH, compatible with those found in CO-bound FeV-co. Moreover, the calculations give the formal oxidation states of 6Fe2+-2Fe3+ for the electronic structures of PN clusters in Fe-nitrogenases. By the comparison of Mo-, V- and Fe-nitrogenases, the overall oxidation levels of 7Fe atoms (Fe1-Fe7) for both FeFe- and FeMo-cos in resting states are found to be higher than that of FeV-co. For the PN clusters in MoFe-, VFe- and FeFe-proteins, they all exhibit a strong reductive character.
RESUMO
Octanuclear polyoxomolybdenum-based porous materials, Na8[Mo8O8(µ2-O)8(µ2-OH)8(3-apz)4]2·26H2O (1, 3-Hapz = 3-aminopyrazole), K8[Mo8O8(µ2-O)8(µ2-OH)8(3-apz)4]2·7H2O (2) and (NH4)4[Mo8O8(µ2-O)8(µ2-OH)4(3-apz)8]·20.5H2O (3), have been successfully synthesized by a hydrothermal method and fully characterized. X-ray structural analyses show that microporous materials 1-3 contain round pores formed by octanuclear molybdenum-oxygen groups connected sequentially with pore sizes of 4.0, 4.0, and 4.8 Å, respectively. Both 1 and 2 are composed of two {Mo8} rings, which are connected by strong intramolecular hydrogen bonds between bridging hydroxy groups and oxygen atoms to form dimeric structures. The central pores in 1 and 2 are occupied by Na+ and K+, respectively, while they are empty in 3. This reflects the structural expansion and contraction effects induced by different cations. Through intermolecular stacking, 1-3 also exhibit channels with sizes of 14.0 × 6.4, 4.6 × 2.6, and 5.4 × 5.4 Å, respectively, which were used for the studies of gas adsorption. The results show that 1-3 can selectively adsorb CO2 and O2, including the empty hole in 3, while they show little or no affinity for gases H2, N2, and CH4. Moreover, an additional polyoxomolybdenum-based species (Mo8O26)n·4n(3-H2apz) (4) has been obtained with protonated 3-aminopyrazole in the absence of a reducing agent, which can serve as an intermediate for the polyoxomolybdenum-based porous products.
RESUMO
The triazolate-assisted asymmetric dinuclear oxovanadium(IV) citrate [V2O2(cit)(Hdatrz)3]·5H2O (1, H4cit = citric acid, Hdatrz = 1H-1,2,4-triazole-3,5-diamine) and its additive salt [V2O2(cit)(Hdatrz)3][V2O2(cit)2]½·2H2datrz·9.5H2O (2) and the polymerized hexanuclear product [V6O6(µ3-O)2(cit)2(Hdatrz)4]·4H2O (3) have been isolated at different temperatures, respectively. Adduct 2 shows strong evidence for the conversion of a symmetric dinuclear oxovanadium(IV) citrate to a mixed-ligand asymmetric oxovanadium(IV) citrate. Moreover, a fully oxidized trinuclear vanadium(V) species [V3O6(µ2-OH)(µ3-O)(Hdatrz)2]·4.5H2O (4) has also been isolated as a quasi-intermediate product of 3 without the coordination of citrate. Intriguingly, an octanuclear mixed-valence oxovanadium(V/IV) citrate K2{[VIV/V2O2(cit)(Hdatrz)(datrz)]2[VIV2O2(cit)(Hdatrz)(datrz)]2}·27.5H2O (5) has been obtained with different vanadium units, where dinuclear mixed-ligands and mixed-valence oxovanadium(IV/V) citrates [VIV/V2O2(cit)(Hdatrz)(datrz)] (5a) and [VIV2O2(cit)(Hdatrz)(datrz)] (5b) have been trapped. Citrate adopts a µ2-η1:η1:η1:η2 coordination mode in 1, 2 and 5, while a µ3-η1:η1:η1:η2 fashion has been observed in 3. Unlike 1-4, complex 5 contains both protonated and deprotonated triazolates simultaneously, where four triazolates further coordinate in a µ3-η1:η1:η1 manner to construct an octanuclear unit. These different structural features in 1-5 are dominated by flexible multidentate citrates and protonated/deprotonated triazolates, showing their synergistic effects. Furthermore, 1 exhibits a rectangular channel, showing preferential adsorption of O2 and CO2 over gases N2, H2, and CH4.
RESUMO
Spontaneous resolution has been found for a pair of cage-like octanuclear mixed-valent vanadium(III/IV) malate enantiomers [Δ-VIII4VIV4O5(R-mal)6(Hdatrz)6]·44.5H2O (ΔR-1) and [Λ-VIII4VIV4O5(S-mal)6(Hdatrz)6]·38.5H2O (ΛS-1, H3mal = malic acid; Hdatrz = 3,5-diamino-1,2,4-triazole). Their racemic reduced product K7[VIII5VIV3O5(R,S-mal)6(trz)6]·17H2O (2) and tetradecanuclear species K11[VIII3VIV11O11(R,S-mal)12(atrz)6]·45.5H2O (3) (Htrz = 1,2,3-triazole, Hatrz = 3-amino-1,2,4-triazole) have also been obtained. In situ decarboxylation happens for 3-amino-1,2,4-triazole-5-carboxylic acid (H2atrzc) to yield 3-amino-1,2,4-triazole under hydrothermal conditions. Both 1 and 2 show an interesting bicapped-triangular-prismatic {V8O5(mal)6} building block, which further decorates symmetrically with three [VIV2O2(R,S-mal)2]2- units to construct a pinwheel-like {V14}-cluster, 3. Bond valence calculation sum (BVS) analyses manifest that the oxidation states of bicapped V atoms are +3 in 1-3, while the other V atoms in the {V6O5} core are ambiguous between +3 and +4 states with strong electron delocalization. Intriguingly, the triple helical chains in 1 associate in parallel to generate an amine-functionalized chiral polyoxovanadate (POV)-based supramolecular open-framework. The diameter of the interior channel is 13.6 Å, showing preferential adsorption of CO2 over gases N2, H2, and CH4. Importantly, homochiral framework ΔR-1 is capable of performing chiral interface recognition for R-1,3-butanediol (R-BDO) through host-guest interactions, as confirmed by the structural analysis of the host-guest complex ΔR-1·3(R-BDO). There are six R-BDO molecules in the channel of ΔR-1.
RESUMO
26 well selected oxidized P-clusters (P2+) from the crystallographic data deposited in the Protein Data Bank have been analysed statistically by the bond-valence sum method with weighting schemes for MoFe proteins at different resolutions. Interestingly, the oxidation states of P2+ clusters correspond to Fe23+Fe62+ with high electron delocalization, showing the same oxidation states as the resting states of P-clusters (PN) in nitrogenases. The previously uncertain reduction of P2+ to PN clusters by two electrons was assigned as a double protonation of P2+, in which decoordination of the serine residue and the peptide chain of cysteine take place, in MoFe proteins. This is further supported by the obviously shorter α-alkoxy C-O bond (average of 1.398â Å) in P2+ clusters and longer α-hydroxy C-O bond (average of 1.422â Å) in PN clusters, while no change is observed in the electronic structures of Fe8S7 Fe atoms in P-clusters. Spatially, the calculations show that Fe3 and Fe6, the most oxidized and most reduced Fe atoms, have the shortest distances of 9.329â Å from the homocitrate in the FeMo cofactor and 14.947â Å from the [Fe4S4] cluster, respectively, and may well function as important electron-transport sites.
Assuntos
Azotobacter vinelandii , Molibdoferredoxina , Molibdoferredoxina/química , Nitrogenase/química , Elétrons , Azotobacter vinelandii/química , Azotobacter vinelandii/metabolismo , Transporte de Elétrons , Oxirredução , Espectroscopia de Ressonância de Spin EletrônicaRESUMO
Hexanuclear polyoxomolybdenum-based discrete supermolecules Nax[MoV6O6(µ2-O)9(Htrz)6-x(trz)x]·nH2O (x = 0, n = 15, 1; x = 1, n = 12, 2; x = 2, n = 10, 3; x = 2, n = 49, 4; Htrz = 1H-1,2,3-triazole) have been prepared and fully characterized with different amounts of sodium cations inside and outside the intrinsic holes. Structural analyses demonstrate that they all exist a triangular channel constructed by six molybdenum-oxygen groups with inner diameters of 2.86 (1), 2.48 (2), and 3.04 (3/4) Å, respectively. Zero, one, or two univalent enthetic guest Na+ have been hosted around the structural centers, which reflect the expansion and contraction effects at microscopic level. Water-soluble species can serve as crown ether-like metallacycles before and after the sodium binding. Diverse nanoscale pores are further formed through intermolecular accumulations with hydrogen bonding. Gas adsorption studies indicate that 2-4 can selectively adsorb CO2 and O2 but have little or even no affinities toward H2, N2, and CH4. Theoretical calculations corroborate the roles of Na+ and auxiliary ligand with different states in bond distances, molecular orbitals, electrostatic potentials, and lattice energies in these discrete clusters. The binding orders of sodium cations in 2-4 are similar with the classical crown ethers, where 2 is the strongest one with 2.226(4)av Å for sodium cation bonded to six O atoms.
RESUMO
Chiral imidazole-based oxidovanadium tartrates (H2im)2[Δ,Λ-VIV2O2(R,R-H2tart)(R,R-tart)(Him)2]·Him (1, H4tart = tartaric acid, Him = imidazole) and [Λ,Λ-VIV2O2(R,R-tart)(Him)6]·4H2O (2) and their corresponding enantiomers (H2im)2[Λ,Δ-VIV2O2(S,S-H2tart)(S,S-tart)(Him)2]·Him (3) and [Δ,Δ-VIV2O2(S,S-tart)(Him)6]·4H2O (4) were obtained in alkaline solutions. Interestingly, the tartrates chelate with vanadium bidentately through α-alkoxy/α-hydroxy and α-carboxy groups and imidazole coordinates monodentately through nitrogen atom. It is worth noting that complexes 1 and 3 contain both protonated α-hydroxy and deprotonated α-alkoxy groups simultaneously, which have short V-Oα-alkoxy distances [1.976(4)av Å in 1-4] and long V-Oα-hydroxy distances [2.237(3)av Å in 1 and 2.230(2)av Å in 3]. There is an interesting strong intramolecular hydrogen bond [O(11)â¯O(1) 2.731(5) Å] between the two parts in 1 and 3. The protonated V-O distances are closer to the average bond distance in reported FeV-cofactors (FeV-cos, V-Oα-alkoxy 2.156av Å) in VFe proteins, which corresponds to the feasible protonation of coordinated α-hydroxy in R-homocitrate in V-nitrogenase, showing the homocitrate in the mechanistic model for nitrogen reduction as a secondary proton donor. Furthermore, vibrational circular dichroism (VCD) and IR spectra of 1-4 pointed out the disparity between the characteristic vibrations of the C-O and C-OH groups clearly. EPR experiment and theoretical calculations support +4 oxidation states for vanadium in 1-4. Solution 13C {1H} NMR spectra and CV analyses exhibited the solution properties for 1 and 2, respectively, which indicates that there should be a rapid exchange equilibrium between the protonated and deprotonated species in solutions.
RESUMO
Pyrazole-assisted tetranuclear microporous polyoxovanadates(III) (POVs) (NH4)2K2[V4(µ2-OH)4(ox)4(pz)4]·9H2O (1, ox = oxalate and pz = pyrazole) and (NH4)2Na2[V4(µ2-OH)4(ox)4(4-mpz)4]·7H2O (2, 4-mpz = 4-methylpyrazole) have been constructed in reduced media, along with their triazole neutral hexa- and octanuclear products K2[V6(µ2-OH)6(ox)6(Hdatrz)6]Cl2·29.5H2O (3) and [V8(µ2-OH)8(SO3)8(Hdatrz)8]·38H2O (4, Hdatrz = 1H-1,2,4-triazole-3,5-diamine) successively. Both polyanionic structures of 1 and 2 share similar inorganic building blocks that consist of regular {V4(µ2-OH)4} skeletons with an inner diameter of 2.8 Å, while a paddle wheel-shaped cluster 3 contains a {V6(µ2-OH)6} skeleton with two chlorides encapsulated around the center of the ring, occupying a hole of 3.7 Å. An interesting isolated intrinsic polyoxometalate-based metal-organic framework (POMOF) 4 exists as an octanuclear petaloid-like skeleton {V8(µ2-OH)8(SO3)8} with an inner diameter of 5.2 Å. Bond valence sum calculations manifest that all V ions have severely reduced +3 oxidation states in 1-4, which are supported by charge balance, structural and magnetic data. Moreover, gas adsorptions indicate that 1, 2 and 4 can adsorb CO2 and O2 more favorably than N2, CH4 and H2 gases. Compared with 1 and 2, due to the functionalization of microchannels with Lewis base amino and hydroxy groups and uncoordinated azolate N-donors inside POMOF 4, it should have notable affinities toward CO2 adsorption.