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1.
Molecules ; 26(14)2021 Jul 16.
Artigo em Inglês | MEDLINE | ID: mdl-34299586

RESUMO

Protein glycosylation is important in many organisms for proper protein folding, signaling, cell adhesion, protein-protein interactions, and immune responses. Thus, effectively determining the extent of glycosylation in glycoprotein therapeutics is crucial. Up to now, characterizing protein glycosylation has been carried out mostly by liquid chromatography mass spectrometry (LC-MS), which requires careful sample processing, e.g., glycan removal or protein digestion and glycopeptide enrichment. Herein, we introduce an NMR-based method to better characterize intact glycoproteins in natural abundance. This non-destructive method relies on exploiting differences in nuclear relaxation to suppress the NMR signals of the protein while maintaining glycan signals. Using RNase B Man5 and RNase B Man9, we establish reference spectra that can be used to determine the different glycoforms present in heterogeneously glycosylated commercial RNase B.


Assuntos
Glicoproteínas/química , Manose/química , Ressonância Magnética Nuclear Biomolecular , Ribonucleases/química , Glicosilação
2.
Infect Immun ; 86(5)2018 05.
Artigo em Inglês | MEDLINE | ID: mdl-29507084

RESUMO

Mucosa-associated invariant T (MAIT) cells are a subset of innate T cells that express a semi-invariant Vα chain paired with limited Vß chains. MAIT cells are activated by riboflavin metabolite derivatives presented by the nonpolymorphic major histocompatibility complex class I (MHC-I)-like molecule MR1. The precise mechanisms required to activate MAIT cells are an area of intense interest. Here we used two closely related intracellular pathogens with distinct inflammasome activation phenotypes to probe the role of innate cytokines in MAIT cell activation. Using an in vitro assay containing transgenic murine MAIT cells, we show that macrophages infected with Francisella novicida, a strong inflammasome activator, released high levels of interleukin-18 (IL-18) and stimulated high levels of MAIT cell gamma interferon (IFN-γ) through a partially MR1-independent pathway. In contrast, macrophages infected with Francisella tularensis live vaccine strain (LVS), a weak inflammasome activator, generated little IL-18 and stimulated low MAIT cell IFN-γ through an MR1-dependent pathway. By manipulating the quantities of IL-18 in these cultures, we show that the IL-18 concentration is sufficient to influence the magnitude of MAIT cell IFN-γ production. Correspondingly, infected IL-18-deficient macrophages failed to induce substantial MAIT cell IFN-γ. In contrast, we found that MAIT cell IFN-γ production in the lungs of IL-18-deficient mice was not significantly different from that in WT mice during F. tularensis LVS pulmonary infection. Overall, we demonstrate that while IL-18 is essential for the MAIT cell IFN-γ response in vitro, it is not essential for MAIT cell IFN-γ production during in vivo LVS pulmonary infection, suggesting that additional signals can drive MAIT cell IFN-γ production in vivo.


Assuntos
Francisella tularensis/imunologia , Interleucina-18/imunologia , Células T Invariantes Associadas à Mucosa/imunologia , Tularemia/imunologia , Animais , Técnicas In Vitro , Camundongos
3.
Glycobiology ; 28(10): 786-801, 2018 10 01.
Artigo em Inglês | MEDLINE | ID: mdl-29924315

RESUMO

Human siglecs are a family of 14 sialic acid-binding proteins, most of which are expressed on subsets of immune cells where they regulate immune responses. Siglec-8 is expressed selectively on human allergic inflammatory cells-primarily eosinophils and mast cells-where engagement causes eosinophil apoptosis and inhibits mast cell mediator release. Evidence supports a model in which human eosinophils and mast cells bind to Siglec-8 sialoglycan ligands on inflammatory target tissues to resolve allergic inflammation and limit tissue damage. To identify Siglec-8-binding sialoglycans from human airways, proteins extracted from postmortem human trachea were resolved by size-exclusion chromatography and composite agarose-acrylamide gel electrophoresis, blotted and probed by Siglec-8-Fc blot overlay. Three size classes of Siglec-8 ligands were identified: 250 kDa, 600 kDa and 1 MDa, each of which was purified by affinity chromatography using a recombinant pentameric form of Siglec-8. Proteomic mass spectrometry identified all size classes as the proteoglycan aggrecan, a finding validated by immunoblotting. Glycan array studies demonstrated Siglec-8 binding to synthetic glycans with a terminal Neu5Acα2-3(6-sulfo)-Gal determinant, a quantitatively minor terminus on keratan sulfate (KS) chains of aggrecan. Treating human tracheal extracts with sialidase or keratanase eliminated Siglec-8 binding, indicating sialylated KS chains as Siglec-8-binding determinants. Treating human tracheal histological sections with keratanase also completely eliminated the binding of Siglec-8-Fc. Finally, Siglec-8 ligand purified from human trachea extracts induced increased apoptosis of freshly isolated human eosinophils in vitro. We conclude that sialylated KS proteoglycans are endogenous human airway ligands that bind Siglec-8 and may regulate allergic inflammation.


Assuntos
Antígenos CD/química , Antígenos de Diferenciação de Linfócitos B/química , Sulfato de Queratano/química , Lectinas/química , Proteoglicanas/química , Ácidos Siálicos/química , Traqueia/química , Antígenos CD/isolamento & purificação , Antígenos CD/metabolismo , Antígenos de Diferenciação de Linfócitos B/isolamento & purificação , Antígenos de Diferenciação de Linfócitos B/metabolismo , Apoptose/efeitos dos fármacos , Eosinófilos/efeitos dos fármacos , Eosinófilos/metabolismo , Feminino , Humanos , Inflamação/metabolismo , Sulfato de Queratano/metabolismo , Sulfato de Queratano/farmacologia , Lectinas/isolamento & purificação , Lectinas/metabolismo , Ligantes , Masculino , Pessoa de Meia-Idade , Proteoglicanas/metabolismo , Proteoglicanas/farmacologia , Ácidos Siálicos/metabolismo , Ácidos Siálicos/farmacologia , Traqueia/metabolismo
4.
Anal Chem ; 90(8): 5040-5047, 2018 04 17.
Artigo em Inglês | MEDLINE | ID: mdl-29561588

RESUMO

Conjugate vaccines are highly heterogeneous in terms of glycosylation sites and linked oligosaccharide length. Therefore, the characterization of conjugate vaccines' glycosylation state is challenging. However, improved product characterization can lead to enhancements in product control and product quality. Here, we present a synergistic combination of high-resolution mass spectrometry (MS) and nuclear magnetic resonance spectroscopy (NMR) for the analysis of glycoconjugates. We use the power of this strategy to characterize model polysaccharide conjugates and to demonstrate a detailed level of glycoproteomic analysis. These are first steps on model compounds that will help untangle the details of complex product characterization in conjugate vaccines. Ultimately, this strategy can be applied to enhance the characterization of polysaccharide conjugate vaccines. In this study, we lay the groundwork for the analysis of conjugate vaccines. To begin this effort, oligosaccharide-peptide conjugates were synthesized by periodate oxidation of an oligosaccharide of a defined length, α,2-8 sialic acid trimer, followed by a reductive amination, and linking the trimer to an immunogenic peptide from tetanus toxoid. Combined mass spectrometry and nuclear magnetic resonance were used to monitor each reaction and conjugation products. Complete NMR peak assignment and detailed MS information on oxidized oligosialic acid and conjugates are reported. These studies provide a deeper understanding of the conjugation chemistry process and products, which can lead to a better controlled production process.


Assuntos
Glicoconjugados/análise , Neisseria meningitidis/metabolismo , Ressonância Magnética Nuclear Biomolecular , Oligossacarídeos/química , Peptídeos/química , Espectrometria de Massas por Ionização e Dessorção a Laser Assistida por Matriz/métodos , Vacinas Conjugadas/análise , Cromatografia Líquida de Alta Pressão/métodos , Cromatografia de Fase Reversa , Glicoconjugados/química , Glicopeptídeos/análise , Neisseria meningitidis/imunologia , Sorogrupo , Toxoide Tetânico/análise , Toxoide Tetânico/química , Vacinas Conjugadas/química
5.
Glycobiology ; 27(7): 657-668, 2017 07 01.
Artigo em Inglês | MEDLINE | ID: mdl-28369504

RESUMO

Siglecs are transmembrane sialoglycan binding proteins, most of which are expressed on leukocyte subsets and have inhibitory motifs that translate cell surface ligation into immune suppression. In humans, Siglec-8 on eosinophils, mast cells and basophils and Siglec-9 on neutrophils, monocytes and some T-cells, mediate immune cell death, inhibition of immune mediator release and/or enhancement of anti-inflammatory mediator release. Endogenous sialoglycan ligands in tissues, mostly uncharacterized, engage siglecs on leukocytes to inhibit inflammation. Glycan array analyses demonstrated that Siglec-8, Siglec-9 and their mouse counterparts Siglec-F and Siglec-E (respectively) have distinct glycan binding specificities, with Siglec-8 more structurally restricted. Since siglecs are involved in lung inflammation, we studied Siglec-8 and Siglec-9 ligands in human lungs and airways. Siglec-8 ligands are in tracheal submucosal glands and cartilage but not airway epithelium or connective tissues, whereas Siglec-9 ligands are broadly distributed. Mouse airways do not have Siglec-8 ligands, whereas Siglec-9 ligands are on airways of both species. Extraction of human airways and lung followed by electrophoretic resolution and siglec blotting revealed Siglec-8 ligands in extracts of human trachea and cultured tracheal gland cells, but not parenchyma or cultured airway epithelial cells whereas Siglec-9 ligands were extracted from all airway and lung tissues and cells tested. Siglec-8 and Siglec-9 ligands in airways appear to be high molecular weight O-linked sialoglycoproteins. These data reveal differential glycan specificities of Siglec-8, Siglec-9 and their mouse counterparts Siglec-F and Siglec-E, and the tissue distributions and molecular characteristics of Siglec-8 and Siglec-9 sialoglycan ligands on human airways and lungs.


Assuntos
Antígenos CD/metabolismo , Antígenos de Diferenciação de Linfócitos B/metabolismo , Lectinas/metabolismo , Mucosa Respiratória/metabolismo , Lectinas Semelhantes a Imunoglobulina de Ligação ao Ácido Siálico/metabolismo , Adulto , Antígenos CD/química , Antígenos de Diferenciação de Linfócitos B/química , Células Cultivadas , Feminino , Humanos , Lectinas/química , Ligantes , Pulmão/citologia , Pulmão/metabolismo , Masculino , Pessoa de Meia-Idade , Ácido N-Acetilneuramínico/metabolismo , Polissacarídeos/metabolismo , Ligação Proteica , Lectinas Semelhantes a Imunoglobulina de Ligação ao Ácido Siálico/química , Traqueia/citologia , Traqueia/metabolismo
6.
J Allergy Clin Immunol ; 135(3): 799-810.e7, 2015 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-25747723

RESUMO

BACKGROUND: Balanced activation and inhibition of the immune system ensures pathogen clearance while avoiding hyperinflammation. Siglecs, sialic acid-binding proteins found on subsets of immune cells, often inhibit inflammation: Siglec-8 on eosinophils and Siglec-9 on neutrophils engage sialoglycan ligands on airways to diminish ongoing inflammation. The identities of human siglec ligands and their expression during inflammation are largely unknown. OBJECTIVE: The histologic distribution, expression, and molecular characteristics of siglec ligands were explored in healthy and inflamed human upper airways and in a cellular model of airway inflammation. METHODS: Normal and chronically inflamed upper airway tissues were stained for siglec ligands. The ligands were extracted from normal and inflamed tissues and from human Calu-3 cells for quantitative analysis by means of siglec blotting and isolation by means of siglec capture. RESULTS: Siglec-8 ligands were expressed on a subpopulation of submucosal gland cells of human inferior turbinate, whereas Siglec-9 ligands were expressed more broadly (submucosal glands, epithelium, and connective tissue); both were significantly upregulated in patients with chronic rhinosinusitis. Human airway (Calu-3) cells expressed Siglec-9 ligands on mucin 5B (MUC5B) under inflammatory control through the nuclear factor κB pathway, and MUC5B carried sialoglycan ligands of Siglec-9 on human upper airway tissue. CONCLUSION: Inflammation results in upregulation of immune-inhibitory Siglec-8 and Siglec-9 sialoglycan ligands on human airways. Siglec-9 ligands are upregulated through the nuclear factor κB pathway, resulting in their enhanced expression on MUC5B. Siglec sialoglycan ligand expression in inflamed cells and tissues may contribute to the control of airway inflammation.


Assuntos
Antígenos CD/genética , Antígenos de Diferenciação de Linfócitos B/genética , Células Epiteliais/imunologia , Lectinas/genética , Mucosa Respiratória/imunologia , Rinite/genética , Lectinas Semelhantes a Imunoglobulina de Ligação ao Ácido Siálico/genética , Sinusite/genética , Adulto , Antígenos CD/imunologia , Antígenos de Diferenciação de Linfócitos B/imunologia , Linhagem Celular , Doença Crônica , Células Epiteliais/efeitos dos fármacos , Células Epiteliais/patologia , Feminino , Regulação da Expressão Gênica , Humanos , Lectinas/imunologia , Ligantes , Lipopolissacarídeos , Masculino , Pessoa de Meia-Idade , Mucina-5B/antagonistas & inibidores , Mucina-5B/genética , Mucina-5B/imunologia , NF-kappa B/genética , NF-kappa B/imunologia , Cultura Primária de Células , RNA Interferente Pequeno/genética , RNA Interferente Pequeno/metabolismo , Mucosa Respiratória/efeitos dos fármacos , Mucosa Respiratória/patologia , Rinite/imunologia , Rinite/patologia , Lectinas Semelhantes a Imunoglobulina de Ligação ao Ácido Siálico/imunologia , Transdução de Sinais , Sinusite/imunologia , Sinusite/patologia , Fator de Necrose Tumoral alfa
7.
Proc Natl Acad Sci U S A ; 109(31): 12680-5, 2012 Jul 31.
Artigo em Inglês | MEDLINE | ID: mdl-22723360

RESUMO

The constant heavy chain (CH1) domain affects antibody affinity and fine specificity, challenging the paradigm that only variable regions contribute to antigen binding. To investigate the role of the CH1 domain, we constructed IgA2 from the broadly neutralizing anti-HIV-1 2F5 IgG1, and compared 2F5 IgA2 and IgG binding affinity and functional activities. We found that 2F5 IgA2 bound to the gp41 membrane proximal external region with higher affinity than IgG1. Functionally, compared with IgG1, 2F5 IgA2 more efficiently blocked HIV-1 transcytosis across epithelial cells and CD4(+) cell infection by R5 HIV-1. The 2F5 IgG1 and IgA2 acted synergistically to fully block HIV-1 transfer from Langerhans to autologous CD4(+) T cells and to inhibit CD4(+) T-cell infection. Epitope mapping performed by screening a random peptide library and in silico docking modeling suggested that along with the 2F5 IgG canonical ELDKWA epitope on gp41, the IgG1 recognized an additional 3D-conformational epitope on the gp41 C-helix. In contrast, the IgA2 epitope included a unique conformational motif on the gp41 N-helix. Overall, the CH1 region of 2F5 contributes to shape its epitope specificity, antibody affinity, and functional activities. In the context of sexually transmitted infections such as HIV-1/AIDS, raising a mucosal IgA-based vaccine response should complement an IgG-based vaccine response in blocking HIV-1 transmission.


Assuntos
Síndrome da Imunodeficiência Adquirida/imunologia , Anticorpos Monoclonais/metabolismo , Anticorpos Neutralizantes/imunologia , Especificidade de Anticorpos , Epitopos/imunologia , Anticorpos Anti-HIV/imunologia , Proteína gp41 do Envelope de HIV/imunologia , HIV-1/imunologia , Imunoglobulina G/imunologia , Síndrome da Imunodeficiência Adquirida/terapia , Síndrome da Imunodeficiência Adquirida/transmissão , Anticorpos Monoclonais/genética , Anticorpos Monoclonais/farmacologia , Anticorpos Neutralizantes/genética , Anticorpos Neutralizantes/farmacologia , Linfócitos T CD4-Positivos/imunologia , Linfócitos T CD4-Positivos/virologia , Células Cultivadas , Epitopos/genética , Anticorpos Anti-HIV/genética , Anticorpos Anti-HIV/farmacologia , Proteína gp41 do Envelope de HIV/genética , HIV-1/genética , HIV-1/patogenicidade , Humanos , Imunoglobulina G/genética , Imunoglobulina G/farmacologia , Estrutura Secundária de Proteína , Transcitose/efeitos dos fármacos , Transcitose/imunologia
8.
J Hum Resour ; 58(4): 1307-1346, 2023 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-37850081

RESUMO

Studying 5.6 million biomedical science articles published over three decades, we reconcile conflicts in a longstanding interdisciplinary literature on scientists' life-cycle productivity by controlling for selective attrition and distinguishing between research quantity and quality. While research quality declines monotonically over the career, this decline is easily overlooked because higher "ability" authors have longer publishing careers. Our results have implications for broader questions of human capital accumulation over the career and federal research policies that shift funding to early-career researchers - while funding researchers at their most creative, these policies must be undertaken carefully because young researchers are less "able" on average.

9.
Sci Rep ; 10(1): 13579, 2020 08 12.
Artigo em Inglês | MEDLINE | ID: mdl-32788608

RESUMO

There is significant interest in targeting MAIT cells with immunostimulatory agents to enhance immune responses. Mycobacterium tuberculosis (M. tb.) is a pervasive respiratory disease that could benefit from treatments that augment immunity. Here we investigate the role of MAIT cells in M. tb. infection and the potential for MAIT cell-targeted immunotherapy to control bacterial burdens. We find that MAIT cells fail to substantially accumulate in the lungs during murine pulmonary M. bovis BCG and M. tb. infections but this defect is overcome by intranasal installation of a TLR2/6 agonist and a MAIT cell antigen. Although artificially induced MAIT cells produce important cytokines in both infections, they control BCG but not M. tb. growth in the lungs. Correspondingly, M. tb.-infected mouse macrophages are relatively resistant to MAIT cell antimicrobial activities in vitro. Thus, MAIT cell antigen-mediated immunotherapy for M. tb. presents a complex challenge.


Assuntos
Vacina BCG/imunologia , Células T Invariantes Associadas à Mucosa/imunologia , Mycobacterium bovis/imunologia , Mycobacterium tuberculosis/imunologia , Tuberculose Pulmonar/imunologia , Animais , Citocinas/imunologia , Citocinas/metabolismo , Feminino , Pulmão/imunologia , Masculino , Camundongos Endogâmicos C57BL , Tuberculose/imunologia
10.
Front Immunol ; 11: 1773, 2020.
Artigo em Inglês | MEDLINE | ID: mdl-32849637

RESUMO

Mucosa-associated invariant T (MAIT) cells are a unique T cell subset that contributes to protective immunity against microbial pathogens, but little is known about the role of chemokines in recruiting MAIT cells to the site of infection. Pulmonary infection with Francisella tularensis live vaccine strain (LVS) stimulates the accrual of large numbers of MAIT cells in the lungs of mice. Using this infection model, we find that MAIT cells are predominantly CXCR6+ but do not require CXCR6 for accumulation in the lungs. However, CXCR6 does contribute to long-term retention of MAIT cells in the airway lumen after clearance of the infection. We also find that MAIT cells are not recruited from secondary lymphoid organs and largely proliferate in situ in the lungs after infection. Nevertheless, the only known ligand for CXCR6, CXCL16, is sufficient to drive MAIT cell accumulation in the lungs in the absence of infection when administered in combination with the MAIT cell antigen 5-OP-RU. Overall, this new data advances the understanding of mechanisms that facilitate MAIT cell accumulation and retention in the lungs.


Assuntos
Quimiocina CXCL16/administração & dosagem , Quimiotaxia de Leucócito/efeitos dos fármacos , Francisella tularensis/patogenicidade , Pulmão/efeitos dos fármacos , Células T Invariantes Associadas à Mucosa/efeitos dos fármacos , Pneumonia Bacteriana/metabolismo , Receptores CXCR6/metabolismo , Administração Intranasal , Animais , Proliferação de Células/efeitos dos fármacos , Células Cultivadas , Quimiocina CXCL16/metabolismo , Técnicas de Cocultura , Modelos Animais de Doenças , Francisella tularensis/imunologia , Interações Hospedeiro-Patógeno , Pulmão/imunologia , Pulmão/metabolismo , Pulmão/microbiologia , Ativação Linfocitária/efeitos dos fármacos , Camundongos Endogâmicos C57BL , Camundongos Knockout , Células T Invariantes Associadas à Mucosa/imunologia , Células T Invariantes Associadas à Mucosa/metabolismo , Células T Invariantes Associadas à Mucosa/microbiologia , Pneumonia Bacteriana/imunologia , Pneumonia Bacteriana/microbiologia , Receptores CXCR6/deficiência , Receptores CXCR6/genética , Ribitol/administração & dosagem , Ribitol/análogos & derivados , Transdução de Sinais , Uracila/administração & dosagem , Uracila/análogos & derivados
11.
FASEB J ; 22(12): 4338-51, 2008 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-18776068

RESUMO

In terms of background, the solution structure of monomeric peptide P1 (residues 649-683), located in the conserved membrane proximal region (MPER) of HIV-1 envelope glycoprotein gp41, is first reported here in dodecylphosphocholine (DPC) micelles. P1 is the minimal MPER region that permits interaction with the mucosal galactosyl ceramide HIV-receptor; it also contains epitopes recognized by major gp41-specific, broadly neutralizing immunoglobulin Gs (IgGs), 2F5 and 4E10, determinant in HIV fusion/infection. Our principal findings were as follows: the structural stability of P1 is pH dependent, as the alpha-helix comprising Q653 I682, present at pH 3.3, is destabilized at higher pH values. At pH 6, the E-rich N-terminal half of P1 (residues 650-666), partially overlapping the 2F5-specific epitope, becomes fully disordered, while the W-rich C-terminal half conserves two shorter helices (W666-W670 and W672-W680), separated by a well-defined bend overlapped by the 4E10-specific epitope. The two IgGs bind to P1 on DPC micelles with binding parameters (K(d)) in the nanomolar range. Next, P1 was derivatized with phosphatidylethanolamine at its C terminal and inserted into liposomes of varied lipid composition, thereby enabling P1 to move laterally. Alternatively, an infectious virus-binding assay was established. The K(d) of both 2F5 and 4E10 IgGs measured on viral liposome and virus are similar and much lower than for the binding of the free peptide. In conclusion, P1, in a lipid environment, is an optimized MPER-derived peptide suitable for designing an immunogen inducing broadly neutralizing antibodies to HIV.


Assuntos
Epitopos/química , Proteína gp41 do Envelope de HIV/química , HIV-1/química , Lipídeos/química , Fragmentos de Peptídeos/química , Concentração de Íons de Hidrogênio , Lipossomos/química , Micelas , Ressonância Magnética Nuclear Biomolecular , Fosforilcolina/análogos & derivados , Estrutura Secundária de Proteína
12.
Cell Calcium ; 43(1): 73-82, 2008 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-17553560

RESUMO

The peptide of HIV-1 envelope gp41 (a.a 628-683), referred to herein as P5, contains P1, a conserved galactose-specific lectin domain for binding the mucosal HIV-1-receptor, galactosyl ceramide (GalCer), as shown earlier, and a potential calcium-binding site (a.a 628-648). P1 contains contiguous epitopes recognized by the broadly neutralizing antibodies 2F5, 4E10, Z13. However, similar neutralizing antibodies could not be raised in animal model using immunogens based on these epitopes. We now show that the structure of both P5 and P1 peptides, as measured by circular dichroism, differs according to their environment: aqueous or lipidic, and as a function of calcium concentration. P5, but not P1, binds to calcium with a low binding affinity constant in the order of 2.5x10(4). Calcium binding results in a conformational change of P5, leading in turn to a decrease in affinity for GalCer. Hence, the affinity of the gp41-lectin site for the galactose harbored by the mucosal HIV-1 receptor GalCer is modulated by the peptide secondary and tertiary structure and the local environment. Therefore, definition of the conformation of this novel extended gp41 membrane proximal region, containing the conserved peptide P1 and the Ca(2+) binding site, could help designing an immunogen efficient at inducing neutralizing anti-HIV-1 antibodies.


Assuntos
Galactosilceramidas/metabolismo , Proteína gp41 do Envelope de HIV/química , Receptores de HIV/metabolismo , Sequência de Aminoácidos , Sítios de Ligação , Cálcio/metabolismo , Dicroísmo Circular , Proteína gp41 do Envelope de HIV/metabolismo , Dados de Sequência Molecular , Mucosa/virologia , Peptídeos/química , Estrutura Terciária de Proteína , Triptofano/análise
13.
Retrovirology ; 5: 93, 2008 Oct 16.
Artigo em Inglês | MEDLINE | ID: mdl-18925934

RESUMO

The membrane proximal region (MPR) of the transmembrane subunit, gp41, of the HIV envelope glycoprotein plays a critical role in HIV-1 infection of CD4+ target cells and CD4-independent mucosal entry. It contains continuous epitopes recognized by neutralizing IgG antibodies 2F5, 4E10 and Z13, and is therefore considered to be a promising target for vaccine design. Moreover, some MPR-derived peptides, such as T20 (enfuvirtide), are in clinical use as HIV-1 inhibitors. We have shown that an extended MPR peptide, P5, harbouring the lectin-like domain of gp41 and a calcium-binding site, is implicated in the interaction of HIV with its mucosal receptor. We now investigate the potential antiviral activities of P5 and other such long MPR-derived peptides. Structural studies of gp41 MPR-derived peptides using circular dichroism showed that the peptides P5 (a.a.628-683), P1 (a.a.648-683), P5L (a.a.613-683) and P7 (a.a.613-746) displayed a well-defined alpha-helical structure. Peptides P5 inhibited HIV-1 envelope mediated cell-cell fusion and infection of peripheral blood mononuclear cells by both X4- and R5-tropic HIV-1 strains, whereas peptides P5 mutated in the calcium binding site or P1 lacked antiviral activity, when P5L blocked cell fusion in contrast to P7. Strikingly, P5 inhibited CD4-dependent infection by T20-resistant R5-tropic HIV-1 variants. Cell-cell fusion studies indicated that the anti-HIV-1 activity of P5, unlike T20, could not be abrogated in the presence of the N-terminal leucine zipper domain (LZ). These results suggested that P5 could serve as a potent fusion inhibitor.


Assuntos
Proteína gp41 do Envelope de HIV/antagonistas & inibidores , Inibidores da Fusão de HIV/farmacologia , HIV-1/fisiologia , Peptídeos/farmacologia , Ligação Viral , Linhagem Celular , Células Cultivadas , Dicroísmo Circular , Humanos , Estrutura Secundária de Proteína
14.
Mol Biol Cell ; 16(9): 4267-79, 2005 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-15975901

RESUMO

The heparan sulfate proteoglycan agrin and adhesion molecules are key players in the formation of neuronal and immune synapses that evolved for efficient communication at the sites of cell-cell contact. Transcytosis of infectious virus across epithelial cells upon contact between HIV-1-infected cells and the mucosal pole of the epithelial cells is one mechanism for HIV-1 entry at mucosal sites. In contrast, transcytosis of cell-free HIV-1 is not efficient. A synapse between HIV-1-infected cells and the mucosal epithelial surface that resembles neuronal and immune synapses is visualized by electron microscopy. We have termed this the "viral synapse." Similarities of the viral synapse also extend to the functional level. HIV-1-infected cell-induced transcytosis depends on RGD-dependent integrins and efficient cell-free virus transcytosis is inducible upon RGD-dependent integrin cross-linking. Agrin appears differentially expressed at the apical epithelial surface and acts as an HIV-1 attachment receptor. Envelope glycoprotein subunit gp41 binds specifically to agrin, reinforcing the interaction of gp41 to its epithelial receptor galactosyl ceramide.


Assuntos
Agrina/fisiologia , Células Epiteliais/virologia , HIV-1/fisiologia , Integrina beta1/fisiologia , Leucócitos Mononucleares/virologia , Transporte Biológico/fisiologia , Comunicação Celular/fisiologia , Linhagem Celular , Membrana Celular/fisiologia , Células Cultivadas , Desintegrinas/fisiologia , Células Epiteliais/ultraestrutura , Galactosilceramidas/metabolismo , Produtos do Gene gag/metabolismo , Proteoglicanas de Heparan Sulfato/fisiologia , Humanos , Lectinas/metabolismo , Leucócitos Mononucleares/fisiologia , Leucócitos Mononucleares/ultraestrutura , Transdução de Sinais/fisiologia , Produtos do Gene gag do Vírus da Imunodeficiência Humana
15.
PLoS One ; 13(7): e0200597, 2018.
Artigo em Inglês | MEDLINE | ID: mdl-30024893

RESUMO

Countries, research institutions, and scholars are interested in identifying and promoting high-impact and transformative scientific research. This paper presents a novel set of text- and citation-based metrics that can be used to identify high-impact and transformative works. The 11 metrics can be grouped into seven types: Radical-Generative, Radical-Destructive, Risky, Multidisciplinary, Wide Impact, Growing Impact, and Impact (overall). The metrics are exemplified, validated, and compared using a set of 10,778,696 MEDLINE articles matched to the Science Citation Index ExpandedTM. Articles are grouped into six 5-year periods (spanning 1983-2012) using publication year and into 6,159 fields constructed using comparable MeSH terms, with which each article is tagged. The analysis is conducted at the level of a field-period pair, of which 15,051 have articles and are used in this study. A factor analysis shows that transformativeness and impact are positively related (ρ = .402), but represent distinct phenomena. Looking at the subcomponents of transformativeness, there is no evidence that transformative work is adopted slowly or that the generation of important new concepts coincides with the obsolescence of existing concepts. We also find that the generation of important new concepts and highly cited work is more risky. Finally, supporting the validity of our metrics, we show that work that draws on a wider range of research fields is used more widely.


Assuntos
Algoritmos , Biologia Computacional/métodos , Fator de Impacto de Revistas , Publicações Periódicas como Assunto/estatística & dados numéricos , Ciência/estatística & dados numéricos , Pesquisa Biomédica/classificação , Pesquisa Biomédica/normas , Pesquisa Biomédica/estatística & dados numéricos , Humanos , Publicações Periódicas como Assunto/classificação , Publicações Periódicas como Assunto/normas , Editoração/classificação , Editoração/normas , Editoração/estatística & dados numéricos , Reprodutibilidade dos Testes , Ciência/classificação , Ciência/normas
16.
J Leukoc Biol ; 102(6): 1381-1388, 2017 12.
Artigo em Inglês | MEDLINE | ID: mdl-28951425

RESUMO

Mechanisms that imprint T cell homing to the small intestine have been well studied; however, those for homing to the colon are poorly understood. Recently, we found that these are distinct subcompartments of the gut mucosal immune system, which implies differential homing. Here, we show that colonic CD11c+ APCs imprint CD8+ T cell preferential homing to the colon, in contrast to those from the small intestine that imprint CD8+ T cell homing to the small intestine, and that the differences are related to the variable ability of APCs to induce α4ß7-integrin and CCR9 expression on T cells. Colon APCs also expressed lower levels of retinoic acid-producing enzymes that are known to control the mucosal homing of T cells. These findings are the first to our knowledge to directly demonstrate that colon APCs imprint T cells to selectively home to the large bowel, which is critical for the design of successful T cell-based therapies and vaccines, such as colon cancer immunotherapy and HIV vaccines.


Assuntos
Células Apresentadoras de Antígenos/imunologia , Antígeno CD11c/metabolismo , Colo/imunologia , Intestino Delgado/imunologia , Receptores de Retorno de Linfócitos/metabolismo , Linfócitos T/imunologia , Animais , Linfócitos T CD8-Positivos/citologia , Linfócitos T CD8-Positivos/imunologia , Compartimento Celular , Movimento Celular , Células Cultivadas , Células Dendríticas/citologia , Imunização , Integrinas/metabolismo , Mucosa Intestinal/imunologia , Camundongos Endogâmicos C57BL , Receptores CCR/metabolismo , Linfócitos T/citologia , Tretinoína/metabolismo
17.
Zhonghua Gan Zang Bing Za Zhi ; 13(3): 205-8, 2005 Mar.
Artigo em Zh | MEDLINE | ID: mdl-15760557

RESUMO

OBJECTIVE: To investigate the effects of augmenter of liver regeneration (ALR) on the proliferation of hepatocytes and hepatic tumor cells and the expression of ALR in herpatocellular carcinoma (HCC). METHODS: Primary rat hepatocytes, QGY and HepG2 cells were cultured separately with ALR from different species. Cell proliferation was detected by their 3H-TdR uptake. The expression of ALR was examined in 9 normal hepatic tissues and 21 HCC cases using immunohistochemistry method. RESULTS: Different ALRs could stimulate the proliferation of HepG2 and QGY cells in a dose-dependent way in vitro, but all ALR had no influence in the proliferation of primary rat hepatocytes. The expression of ALR was absent in normal hepatic tissues, but present in all HCC hepatic tissues. However, the expression of ALR had no relationship with the differentiation and size of the carcinomas. CONCLUSION: ALR might play an important role in the occurrence and development of HCC.


Assuntos
Neoplasias Hepáticas/metabolismo , Regeneração Hepática/fisiologia , Proteínas/metabolismo , Animais , Carcinoma Hepatocelular/metabolismo , Hepatócitos/metabolismo , Regeneração Hepática/efeitos dos fármacos , Masculino , Proteínas/genética , Ratos , Ratos Wistar
18.
PLoS One ; 10(11): e0143001, 2015.
Artigo em Inglês | MEDLINE | ID: mdl-26600079

RESUMO

Interleukin (IL)-15 has multiple roles in innate and adaptive immunity, especially regarding CD8+ T cells and natural killer cells. However, the role of IL-15 in regulating differentiation of T helper cell subsets and mononuclear phagocytes (MPs) in different tissues in vivo is unknown. Here we report that IL-15 indirectly regulates Th17 but not other Th subsets in the intestinal lamina propria (LP), apparently through effects on MPs. Th17 cells in the LP were more prevalent in IL-15 KO mice than their wild-type counterparts, and less prevalent in IL-15 transgenic mice than their wild-type littermates, even co-caged. MPs from the LP of these mice were sufficient to mimic the in vivo finding in vitro by skewing of cocultured wild type OVA-specific CD4+ T cells. However, production of IL-15 or lack thereof by these MPs was not sufficient to explain the skewing, as addition or blockade of IL-15 in the cultures had no effect. Rather, a skewing of the relative proportion of CD11b+, CD103+ and double positive LP MP subsets in transgenic and KO could explain the differences in Th17 cells. Thus, IL-15 may influence MP subsets in the gut in a novel way that alters the frequency of LP Th17 cells.


Assuntos
Interleucina-15/metabolismo , Mucosa Intestinal/imunologia , Leucócitos Mononucleares/citologia , Fagócitos/citologia , Células Th17/citologia , Animais , Antígenos/imunologia , Diferenciação Celular/imunologia , Citometria de Fluxo , Interleucina-15/deficiência , Interleucina-17/biossíntese , Contagem de Linfócitos , Camundongos Endogâmicos C57BL , Camundongos Knockout , Fenótipo , Linfócitos T Reguladores/imunologia , Células Th1/imunologia , Células Th17/imunologia
19.
World J Gastroenterol ; 10(21): 3188-90, 2004 Nov 01.
Artigo em Inglês | MEDLINE | ID: mdl-15457571

RESUMO

AIM: To construct a yeast expression system of human augmenter of liver regeneration (hALR) and to examine its bioactivity in vitro. METHODS: With PCR and gene recombination techniques, cDNA of open reading frame of hALR was obtained from recombinant plasmid pcDNA3.1-hALR and inserted into plasmid pPIC9. The cDNA of hALR from recombinant plasmid pPIC9-hALR demonstrated by sequencing was subcloned into plasmid pPIC9K. The recombinant plasmid pPIC9K-hALR was transformed into GS115 with electroporation. hALR was expressed by GS115 under the induction of 5 mL/L methanol and purified with ultrafiltration after it was analyzed by 15% SDS-PAGE and Western blot. The effects of hALR on in vitro proliferation of QGY and HepG(2) cells were evaluated by (3)H-TdR methods. RESULTS: The correctness and integrity of recombinant plasmids pPIC9-hALR and pPIC9K-hALR were identified by restriction digestion, PCR and sequencing methods, respectively. hALR as a secretive protein was successfully expressed by GS115. Its molecular weight was about 15 ku and the target protein was about 60% of the total protein in the supernatant from GS115 with plasmid pPIC9K-hALR. The results of Western blot of hALR showed the specific band. The high qualitative hALR was obtained through ultrafiltration. hALR could stimulate in vitro proliferation of QGY and HepG(2) cells in a dose-dependent manner, but there was a difference in reactivity to hALR between QGY and HepG(2). CONCLUSION: The hALR as a secretive protein can be successfully expressed by GS115. It may stimulate in vitro proliferation of QGY and HepG(2) cells at a dose-dependent manner. But QGY and HepG(2) cells have different reactivities to hALR.


Assuntos
Pichia/genética , Proteínas/genética , Western Blotting , Carcinoma Hepatocelular , Linhagem Celular Tumoral , Expressão Gênica , Humanos , Técnicas In Vitro , Neoplasias Hepáticas , Biologia Molecular/métodos , Plasmídeos , Proteínas/isolamento & purificação , Proteínas/metabolismo , Proteínas Recombinantes/genética
20.
Zhonghua Gan Zang Bing Za Zhi ; 11(7): 421-3, 2003 Jul.
Artigo em Zh | MEDLINE | ID: mdl-12890348

RESUMO

OBJECTIVES: To construct yeast expression plasmid of rat augmenter of liver regeneration (rALR), express it in GS115, and examine its bioactivity in vitro. METHODS: With PCR and genetic recombination techniques, the gene fragment of rALR was amplified from recombinant plasmid pcDNA3.1-rALR, and the recombinant plasmid pPIC9K-rALR was constructed. The recombinant plasmid pPIC9K-rALR was transducted into GS115 by electroporation after identified with endonuclease digestion and PCR amplification. The target protein was expressed by GS115 under the induction of 0.5% methanol. The recombinant rALR (rrALR) was purified with ultrafiltration after demonstrated by 15% SDS-PAGE and western blot. The effects of rrALR on the proliferation of QGY, HepG2 cells and primary rat hepatocytes in vitro were evaluated by 3H-TdR intake method. RESULTS: Recombinant plasmid pPIC9K-rALR was identified by restriction digestion and PCR methods. The rrALR as a secretive protein was successfully expressed in GS115. Its molecular weight, 1.5x10(4), was in correspondence with theoretic value. The rrALR could bind with the polyclonal antibody against human ALR in western blot, which demonstrated that there was cross-antigenicity between human and rat ALR. The high qualitative rrALR was obtained through ultrafiltration. Among the experimental concentrations, the rrALR could stimulate the proliferations of QGY and HepG2 cells in a dose-dependent manner in vitro, but had little effect on the proliferation of primary rat hepatocytes in vitro. CONCLUSIONS: The rrALR as a secretive protein is expressed in GS115 efficiently. The rrALR can stimulate the proliferations of QGY and HepG2 cells in a dose-dependent manner in vitro, but had no effect on primary rat hepatocytes, which demonstrates that there exists different receptors on the normal hepatocytes and hepatocarcinoma cells. There are cross-bioactivity and cross-antigenicity between human and rat ALR.


Assuntos
Pichia/genética , Biossíntese de Proteínas , Proteínas Recombinantes/biossíntese , Animais , Western Blotting , Relação Dose-Resposta a Droga , Hepatócitos/efeitos dos fármacos , Reação em Cadeia da Polimerase , Proteínas/isolamento & purificação , Proteínas/farmacologia , Ratos , Proteínas Recombinantes/isolamento & purificação , Proteínas Recombinantes/farmacologia
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