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2.
Appl Environ Microbiol ; 86(3)2020 01 21.
Artigo em Inglês | MEDLINE | ID: mdl-31732569

RESUMO

Human viruses are ubiquitous contaminants in surface waters, where they can persist over extended periods of time. Among the factors governing their environmental persistence, the control (removal or inactivation) by microorganisms remains poorly understood. Here, we determined the contribution of indigenous bacteria and protists to the decay of human viruses in surface waters. Incubation of echovirus 11 (E11) in freshwater from Lake Geneva and seawater from the Mediterranean Sea led to a 2.5-log10 reduction in the infectious virus concentration within 48 h at 22°C, whereas E11 was stable in sterile controls. The observed virus reduction was attributed to the action of both bacteria and protists in the biologically active matrices. The effect of microorganisms on viruses was temperature dependent, with a complete inhibition of microbial virus control in lake water at temperatures of ≤16°C. Among three protist isolates tested (Paraphysomonas sp., Uronema marinum, and Caecitellus paraparvulus), Caecitellus paraparvulus was particularly efficient at controlling E11 (2.1-log10 reduction over 4 days with an initial protist concentration of 103 cells ml-1). In addition, other viruses (human adenovirus type 2 and bacteriophage H6) exhibited different grazing kinetics than E11, indicating that the efficacy of antiviral action also depended on the type of virus. In conclusion, indigenous bacteria and protists in lake water and seawater can modulate the persistence of E11. These results pave the way for further research to understand how microorganisms control human viral pathogens in aquatic ecosystems and to exploit this process as a treatment solution to enhance microbial water safety.IMPORTANCE Waterborne human viruses can persist in the environment, causing a risk to human health over long periods of time. In this work, we demonstrate that in both freshwater and seawater environments, indigenous bacteria and protists can graze on waterborne viruses and thereby reduce their persistence. We furthermore demonstrate that the efficiency of the grazing process depends on temperature, virus type, and protist species. These findings may facilitate the design of biological methods for the disinfection of water and wastewater.


Assuntos
Cadeia Alimentar , Lagos , Viabilidade Microbiana , Viroses/virologia , Fenômenos Fisiológicos Virais , Doenças Transmitidas pela Água/virologia , Oceano Atlântico , Fenômenos Fisiológicos Bacterianos , Chrysophyta/fisiologia , Lagos/microbiologia , Lagos/parasitologia , Lagos/virologia , Mar Mediterrâneo , Oligoimenóforos/fisiologia , Água do Mar/microbiologia , Água do Mar/parasitologia , Água do Mar/virologia , Espanha , Especificidade da Espécie , Estramenópilas/fisiologia , Suíça , Vírus/classificação
3.
BMC Infect Dis ; 20(1): 260, 2020 Apr 03.
Artigo em Inglês | MEDLINE | ID: mdl-32245368

RESUMO

BACKGROUND: Infection by hepatitis E virus (HEV) can cause a high burden of morbidity and mortality in countries with poor access to clean water and sanitation. Our study aimed to investigate the situation of HEV infections in the Central African Republic (CAR). METHODS: A retrospective analysis of the blood samples and notification forms collected through the national yellow fever (YF) surveillance program, but for which a diagnosis of YF was discarded, was carried out using an anti-HEV IgM ELISA and a HEV-specific RT-PCR. RESULTS: Of 2883 YF-negative samples collected between January 2008 and December 2012, 745 (~ 26%) tested positive by at least either of the 2 tests used to confirm HEV cases. The results revealed that the CAR was hit by a large HEV outbreak in 2008 and 2009. The results also showed a clear seasonal pattern with correlation between HEV incidence and rainfall in Bangui. A phylogenetic analysis showed that the circulating strains belonged to genotypes 1e and 2b. CONCLUSIONS: Overall, this study provides further evidences that HEV can be a significant cause of acute febrile jaundice, particularly among adults during rainy season or flood, in a country from Sub-Saharan Africa.


Assuntos
Surtos de Doenças , Vírus da Hepatite E/genética , Vírus da Hepatite E/imunologia , Hepatite E/diagnóstico , Hepatite E/epidemiologia , Chuva , Doenças Transmitidas pela Água/epidemiologia , Adolescente , Adulto , República Centro-Africana/epidemiologia , Criança , Ensaio de Imunoadsorção Enzimática , Feminino , Inundações , Genótipo , Anticorpos Anti-Hepatite/sangue , Hepatite E/complicações , Hepatite E/virologia , Vírus da Hepatite E/isolamento & purificação , Humanos , Imunoglobulina M/sangue , Incidência , Icterícia/etiologia , Estudos Longitudinais , Masculino , Filogenia , Reação em Cadeia da Polimerase em Tempo Real , Estudos Retrospectivos , Doenças Transmitidas pela Água/virologia , Adulto Jovem
4.
Laeknabladid ; 106(6): 293-301, 2020 06.
Artigo em Is | MEDLINE | ID: mdl-32491991

RESUMO

PURPOSE: Clean drinking water is essential for public health. The cause of waterborne outbreaks is most often faecal contamination of water from animals or humans. The objective of this resarch was to collect available information on waterborne outbreaks in Iceland for the twenty year period, 1998-2017. Incident of faecal and pathogenic pollution in samples where also collected even though rarely followed by registered outbreak. METHODS: Data are obtained from laboratory databases, the Directorate of Health, reports and interviews with the relevant surveillance authorities and epidemiologists. RESULTS: The results show that for the period investigated fifteen waterborne outbreaks were registered, all in small water supplies, many of which served transitent population, tourists and summerhouse dwellers. About 500 illnesses were confirmed and 8000 people affected. Other research have shown that around 10% of illnesses in waterborne outbreaks are registered so it can be estimated that on average 250 people have been taken ill every year because of contaminated drinking water. Analysis of monitoring water quality data show that on average 50 water supplies, or about 5% of the Icelandic registered water supplies have contained faecal matter every year. The most frequent cause of waterborne outbreak were poor design and inadequate maintainance of water intakes. CONCLUSIONS: It is likely that waterborne outbreaks are more numerous than are registered in official reports, especially concerning small water supplies. It also seems that the local heath authorities are often not informed of incidents of non-compliance. It is important to improve registration, information exchange between parties, epidemiological surveys and follow up of outbreaks due to drinking water to gather lessons learned. Water quality at small water supplies needs to be improved with risk-based approach and risk management.


Assuntos
Infecções por Caliciviridae/epidemiologia , Infecções por Campylobacter/epidemiologia , Criptosporidiose/epidemiologia , Microbiologia da Água , Abastecimento de Água , Doenças Transmitidas pela Água/epidemiologia , Infecções por Caliciviridae/diagnóstico , Infecções por Caliciviridae/virologia , Campylobacter/isolamento & purificação , Infecções por Campylobacter/diagnóstico , Infecções por Campylobacter/microbiologia , Criptosporidiose/parasitologia , Cryptosporidium/isolamento & purificação , Monitoramento Ambiental , Fezes/microbiologia , Fezes/parasitologia , Fezes/virologia , Humanos , Islândia/epidemiologia , Norovirus/isolamento & purificação , Fatores de Tempo , Poluição da Água , Doenças Transmitidas pela Água/microbiologia , Doenças Transmitidas pela Água/parasitologia , Doenças Transmitidas pela Água/virologia
5.
Sensors (Basel) ; 19(20)2019 Oct 16.
Artigo em Inglês | MEDLINE | ID: mdl-31623064

RESUMO

Waterborne diseases that originated due to pathogen microorganisms are emerging as a serious global health concern. Therefore, rapid, accurate, and specific detection of these microorganisms (i.e., bacteria, viruses, protozoa, and parasitic pathogens) in water resources has become a requirement of water quality assessment. Significant research has been conducted to develop rapid, efficient, scalable, and affordable sensing techniques to detect biological contaminants. State-of-the-art technology-assisted smart sensors have improved features (high sensitivity and very low detection limit) and can perform in a real-time manner. However, there is still a need to promote this area of research, keeping global aspects and demand in mind. Keeping this view, this article was designed carefully and critically to explore sensing technologies developed for the detection of biological contaminants. Advancements using paper-based assays, microfluidic platforms, and lateral flow devices are discussed in this report. The emerging recent trends, mainly point-of-care (POC) technologies, of water safety analysis are also discussed here, along with challenges and future prospective applications of these smart sensing technologies for water health diagnostics.


Assuntos
Bactérias/isolamento & purificação , Técnicas Biossensoriais , Vírus/isolamento & purificação , Doenças Transmitidas pela Água/diagnóstico , Bactérias/patogenicidade , Humanos , Sistemas Automatizados de Assistência Junto ao Leito , Vírus/patogenicidade , Água , Microbiologia da Água , Doenças Transmitidas pela Água/microbiologia , Doenças Transmitidas pela Água/virologia
6.
Epidemiol Infect ; 146(7): 879-887, 2018 05.
Artigo em Inglês | MEDLINE | ID: mdl-29633676

RESUMO

In May 2016 a Norovirus (NoV) gastroenteritis outbreak involved a high school class visiting a seaside resort near Taormina (Mascali, Sicily). Twenty-four students and a teacher were affected and 17 of them showed symptoms on the second day of the journey, while the others got ill within the following 2 days. Symptoms included vomiting, diarrhoea and fever, and 12 students required hospitalisation. Stool samples tested positive for NoV genome by Real-Time polymerase chain reaction assay in all 25 symptomatic subjects. The GII.P2/GII.2 NoV genotype was linked to the outbreak by ORF1/ORF2 sequence analysis. The epidemiological features of the outbreak were consistent with food/waterborne followed by person-to-person and/or vomit transmission. Food consumed at a shared lunch on the first day of the trip was associated to illness and drinking un-bottled tap water was also considered as a risk factor. The analysis of water samples revealed the presence of bacterial indicators of faecal contamination in the water used in the resort as well as in other areas of the municipal water network, linking the NoV gastroenteritis outbreak to tap water pollution from sewage leakage. From a single water sample, an amplicon whose sequence corresponded to the capsid genotype recovered from patients could be obtained.


Assuntos
Infecções por Caliciviridae/epidemiologia , Surtos de Doenças , Água Potável/virologia , Gastroenterite/epidemiologia , Norovirus/fisiologia , Doenças Transmitidas pela Água/epidemiologia , Adolescente , Infecções por Caliciviridae/virologia , Feminino , Gastroenterite/virologia , Humanos , Masculino , Sicília/epidemiologia , Doenças Transmitidas pela Água/virologia
7.
Lett Appl Microbiol ; 66(4): 313-320, 2018 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-29330866

RESUMO

This study aimed to assess anthropogenic impact of surrounding population in the Private Reserve of Natural Heritage at Pantanal, the world's largest freshwater wetland ecosystem located in the centre of South America. Viral aetiological agents of acute gastroenteritis as rotavirus A (RVA), noroviruses, human adenoviruses, klassevirus and of hepatitis, as hepatitis A virus, were investigated in different aquatic matrices. Annual collection campaigns were carried out from 2009 to 2012, alternating dry and rainy seasons. Viral particles present in the samples were concentrated by the adsorption-elution method, with negatively charged membranes, and detected by qualitative and quantitative PCR. From a total of 43 samples at least one virus was detected in 65% (28) of them. Viruses were detected in all matrices with concentrations ranging from 2 × 102 to 8·3 × 104 genome copies per litre. A significant higher RVA frequency was observed in the dry season. Our data revealing dissemination of human enteric viruses in water matrices both inside and outside the reserve could be useful to trace faecal contamination in the environment and to minimize the risk of infection by exposure of susceptible individuals. SIGNIFICANCE AND IMPACT OF THE STUDY: This study is part of a collaborative project designed to investigate the environmental and health conditions of the Private Reserve of Natural Heritage at Pantanal, the largest seasonally flooded wetland in the world. The project aimed to promote health and quality of human and wildlife extending technical-scientific knowledge about pathogens present in the region. By assessing the occurrence of human enteric viruses in different water matrices we demonstrated the anthropogenic impact of surrounding population and pointed out the potential risk of infection by exposure of susceptible individuals.


Assuntos
Adenoviridae/isolamento & purificação , Enterovirus/isolamento & purificação , Gastroenterite/virologia , Vírus da Hepatite A/isolamento & purificação , Norovirus/isolamento & purificação , Parques Recreativos , Rotavirus/isolamento & purificação , Doenças Transmitidas pela Água/virologia , Adenoviridae/genética , Antígenos Virais , Brasil/epidemiologia , Ecossistema , Enterovirus/genética , Fezes/virologia , Água Doce/virologia , Gastroenterite/epidemiologia , Vírus da Hepatite A/genética , Humanos , Norovirus/genética , Chuva/virologia , Reação em Cadeia da Polimerase em Tempo Real , Rotavirus/genética , Estações do Ano , Microbiologia da Água , Doenças Transmitidas pela Água/epidemiologia
8.
J Water Health ; 15(1): 83-96, 2017 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-28151442

RESUMO

The present work compiles a review on drinking waterborne outbreaks, with the perspective of production and distribution of microbiologically safe water, during 2000-2014. The outbreaks are categorised in raw water contamination, treatment deficiencies and distribution network failure. The main causes for contamination were: for groundwater, intrusion of animal faeces or wastewater due to heavy rain; in surface water, discharge of wastewater into the water source and increased turbidity and colour; at treatment plants, malfunctioning of the disinfection equipment; and for distribution systems, cross-connections, pipe breaks and wastewater intrusion into the network. Pathogens causing the largest number of affected consumers were Cryptosporidium, norovirus, Giardia, Campylobacter, and rotavirus. The largest number of different pathogens was found for the treatment works and the distribution network. The largest number of affected consumers with gastrointestinal illness was for contamination events from a surface water source, while the largest number of individual events occurred for the distribution network.


Assuntos
Surtos de Doenças , Água Potável/microbiologia , Purificação da Água , Doenças Transmitidas pela Água/epidemiologia , Doenças Transmitidas pela Água/microbiologia , Doenças Transmitidas pela Água/virologia
9.
J Water Health ; 15(3): 438-450, 2017 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-28598348

RESUMO

Diseases spread by water are caused by fecal-oral, contact, inhalation, or other routes, resulting in illnesses affecting multiple body systems. We selected 13 pathogens or syndromes implicated in waterborne disease outbreaks or other well-documented waterborne transmission (acute otitis externa, Campylobacter, Cryptosporidium, Escherichia coli (E. coli), free-living ameba, Giardia, Hepatitis A virus, Legionella (Legionnaires' disease), nontuberculous mycobacteria (NTM), Pseudomonas-related pneumonia or septicemia, Salmonella, Shigella, and Vibrio). We documented annual numbers of deaths in the United States associated with these infections using a combination of death certificate data, nationally representative hospital discharge data, and disease-specific surveillance systems (2003-2009). We documented 6,939 annual total deaths associated with the 13 infections; of these, 493 (7%) were caused by seven pathogens transmitted by the fecal-oral route. A total of 6,301 deaths (91%) were associated with infections from Pseudomonas, NTM, and Legionella, environmental pathogens that grow in water system biofilms. Biofilm-associated pathogens can cause illness following inhalation of aerosols or contact with contaminated water. These findings suggest that most mortality from these 13 selected infections in the United States does not result from classical fecal-oral transmission but rather from other transmission routes.


Assuntos
Doenças Transmitidas pela Água/mortalidade , Adolescente , Adulto , Idoso , Idoso de 80 Anos ou mais , Criança , Humanos , Pessoa de Meia-Idade , Estados Unidos/epidemiologia , Doenças Transmitidas pela Água/microbiologia , Doenças Transmitidas pela Água/parasitologia , Doenças Transmitidas pela Água/virologia , Adulto Jovem
10.
Lett Appl Microbiol ; 65(4): 298-305, 2017 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-28708249

RESUMO

The objective of the present study was to assess the occurrence of major waterborne enteric viruses (enterovirus, norovirus, adenovirus, rotavirus, hepatitis A and E virus) along the Tiber River in Italy, in areas affected by different kinds of anthropogenic pressure (agricultural, urban, industrial and pristine). Moreover, in light of the recent abundant detection of human bocavirus in urban wastewater samples in Italy, the occurrence of this virus was also assessed. Virus detection was based on nested PCR followed by sequencing, and on real-time PCR. A correlation with anthropogenic pressure was observed. The urban and industrial areas were the most contaminated (100 and 75% of samples were positive for at least one virus respectively). The agricultural area was less contaminated, with 50% of samples positive. None of the samples collected in a pristine area were positive for viruses. The most frequently detected virus was human bocavirus, identified in 37·5% of samples, followed by norovirus and enterovirus (28% each) and adenovirus (21·6%). Rotavirus, and hepatitis A and E viruses were less common (<9%). Although Human Bocavirus is not considered a waterborne pathogen, the widespread contamination of river waters suggests that virus transmission via the water route should not be neglected. SIGNIFICANCE AND IMPACT OF THE STUDY: To the best of our knowledge, this study constitutes the first attempt to assess the occurrence of enteric viruses in river waters, in areas differentially influenced by anthropogenic pressure. Enteric viruses (enterovirus, norovirus, adenovirus, rotavirus, hepatitis A and E viruses, and bocavirus) were widespread in the industrial and urban areas, and were less frequently detected in the agricultural area. Interestingly, human bocavirus was the most frequently detected virus, outnumbering even adenoviruses, known to be widespread in water environments. The widespread presence of bocavirus in surface waters suggests that a potential role of water in its transmission should not be excluded.


Assuntos
Rios/virologia , Viroses/transmissão , Microbiologia da Água , Qualidade da Água , Doenças Transmitidas pela Água/virologia , Adenoviridae/genética , Adenoviridae/isolamento & purificação , Bocavirus/genética , Bocavirus/isolamento & purificação , Enterovirus/genética , Enterovirus/isolamento & purificação , Vírus da Hepatite A/genética , Vírus da Hepatite A/isolamento & purificação , Vírus da Hepatite E/genética , Vírus da Hepatite E/isolamento & purificação , Humanos , Itália , Norovirus/genética , Norovirus/isolamento & purificação , Reação em Cadeia da Polimerase em Tempo Real , Rotavirus/genética , Rotavirus/isolamento & purificação , Viroses/virologia , Águas Residuárias/virologia , Doenças Transmitidas pela Água/transmissão
11.
J Med Virol ; 88(10): 1742-50, 2016 10.
Artigo em Inglês | MEDLINE | ID: mdl-27003679

RESUMO

Norovirus infections in diarrhea patients attending an urban and a rural hospital in Bangladesh were investigated. A total of 953 fecal specimens from both children and adults collected during 2010-2014 were tested for the presence of norovirus using real time PCR. One fourth (25%) of the specimens were positive for norovirus RNA which was identified both in children and adults. Norovirus was associated with short duration of diarrhea, high abdominal pain, and more moderate to severe dehydration when compared with rotavirus infections. Norovirus GII (69%) was the most prevalent genogroup followed by GI (18%), mixed GI/GII/GIV (11%), and GIV (2%). Among GII genogroup, GII.4 (42%) was the most prevalent genotype followed by GII.3 (21%), GII.6 (7%), GII.7 (6%), and GII.21 (6%). GII.4 and GII.3 strains were frequently identified (82% and 75%, respectively) in children <2 years of age and less commonly (16% and 15%) in adults more than 18 years of age. The present study reinforces the importance of norovirus-associated hospitalizations both in children and adults. The dynamic molecular epidemiology of norovirus requires routine strain surveillance to identify changes in prevailing strains. J. Med. Virol. 88:1742-1750, 2016. © 2016 Wiley Periodicals, Inc.


Assuntos
Infecções por Caliciviridae/epidemiologia , Diarreia/epidemiologia , Gastroenterite/virologia , Variação Genética , Adolescente , Bangladesh/epidemiologia , Infecções por Caliciviridae/virologia , Criança , Pré-Escolar , Diarreia/virologia , Fezes/virologia , Feminino , Doenças Transmitidas por Alimentos/epidemiologia , Doenças Transmitidas por Alimentos/virologia , Gastroenterite/epidemiologia , Genótipo , Humanos , Lactente , Masculino , Norovirus/genética , Norovirus/isolamento & purificação , Filogenia , Prevalência , RNA Viral/genética , RNA Viral/isolamento & purificação , Reação em Cadeia da Polimerase em Tempo Real , Infecções por Rotavirus/epidemiologia , Infecções por Rotavirus/virologia , Análise de Sequência de DNA , Doenças Transmitidas pela Água/epidemiologia , Doenças Transmitidas pela Água/virologia
12.
Epidemiol Infect ; 144(6): 1212-9, 2016 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-26482884

RESUMO

In late 2014, a gastroenteritis outbreak occurred in a school in Shandong Province, eastern China. Hundreds of individuals developed the symptoms of diarrhoea and vomiting. Epidemiological investigation showed that food consumption was not linked to this outbreak, and unboiled direct drinking water was identified as the independent risk factor with a relative risk of 1·37 (95% confidence interval 1·03-1·83). Furthermore, examination of common bacterial and viral gastroenteritis pathogens was conducted on different specimens. Norovirus GI.1, GI.2, GI.6, GII.4, GII.6 and GII.13 were detected in clinical specimens and a water sample. GII.4 sequences between clinical specimens and the water sample displayed a close relationship and belonged to GII.4 variant Sydney 2012. These results indicate that direct drinking water contaminated by norovirus was responsible for this gastroenteritis outbreak. This study enriches our knowledge of waterborne norovirus outbreaks in China, and presents valuable prevention and control practices for policy-makers. In future, strengthened surveillance and supervision of direct drinking-water systems is needed.


Assuntos
Infecções por Caliciviridae/epidemiologia , Surtos de Doenças , Água Potável/virologia , Gastroenterite/epidemiologia , Norovirus/isolamento & purificação , Instituições Acadêmicas , Doenças Transmitidas pela Água/epidemiologia , Adolescente , Infecções por Caliciviridae/transmissão , Criança , China/epidemiologia , Estudos de Coortes , Gastroenterite/virologia , Humanos , Dados de Sequência Molecular , Norovirus/genética , Filogenia , Estudos Retrospectivos , Análise de Sequência de DNA , Proteínas Virais/genética , Doenças Transmitidas pela Água/transmissão , Doenças Transmitidas pela Água/virologia
13.
BMC Infect Dis ; 16(1): 631, 2016 11 04.
Artigo em Inglês | MEDLINE | ID: mdl-27809855

RESUMO

BACKGROUND: Highly pathogenic avian influenza A (H5N1) virus has been of public health concern since 2003. Probable risk factors for A(H5N1) transmission to human have been demonstrated in several studies or epidemiological reports. However, transmission patterns may differ according to demographic characteristics of the population and local practices. This article aggregates these data from three studies with data collected in the previous surveys in 2006 and 2007 to further examine the risks factors associated with presence of anti-A(H5) antibodies among villagers residing within outbreak areas. METHODS: We aggregated 5-year data (2006-2010) from serology survey and matched case-control studies in Cambodia to further examine the risks factors associated with A(H5N1) infection among villagers in the outbreak areas. RESULTS: Serotesting among villagers detected 35 (1.5 % [0-2.6]) positive cases suggesting recent exposure to A(H5N1) virus. Practices associated with A(H5N1) infection among all ages were: having poultry cage or nesting area under or adjacent to the house (OR: 6.7 [1.6-28.3]; p = 0.010) and transporting poultry to market (OR: 17.6 [1.6-193.7]; p = 0.019). Practices found as risk factors for the infection among age under 20 years were swimming/bathing in ponds also accessed by domestic poultry (OR: 4.6 [1.1-19.1]; p = 0.038). Association with consuming wild birds reached borderline significance (p = 0.066). CONCLUSION: Our results suggest that swimming/bathing in contaminated pond water and close contact with poultry may present a risk of A(H5N1) transmission to human.


Assuntos
Virus da Influenza A Subtipo H5N1/patogenicidade , Influenza Aviária/transmissão , Influenza Humana/transmissão , Lagoas/virologia , Aves Domésticas/virologia , Saúde Pública , Doenças Transmitidas pela Água/transmissão , Doenças Transmitidas pela Água/virologia , Adolescente , Adulto , Idoso , Idoso de 80 Anos ou mais , Animais , Animais Selvagens/virologia , Camboja/epidemiologia , Criança , Pré-Escolar , Surtos de Doenças/prevenção & controle , Surtos de Doenças/estatística & dados numéricos , Poluição Ambiental , Feminino , Humanos , Lactente , Influenza Aviária/virologia , Influenza Humana/virologia , Masculino , Pessoa de Meia-Idade , Fatores de Risco , Poluentes da Água , Adulto Jovem
14.
Foodborne Pathog Dis ; 13(2): 101-7, 2016 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-26863429

RESUMO

This study systemically analyzed data on the prevalence of foodborne pathogens and foodborne disease outbreaks to identify the priorities of foodborne infection risk management in Korea. Multiple correspondence analysis was applied to three variables: origin of food source, phase of food supply chain, and 12 pathogens using 358 cases from 76 original papers and official reports published in 1998-2012. In addition, correspondence analysis of two variables--place and pathogen--was conducted based on epidemiological data of 2357 foodborne outbreaks in 2002-2011 provided by the Korean Ministry of Food and Drug Safety. The results of this study revealed three distinct areas of food monitoring: (1) livestock-derived raw food contaminated with Campylobacter spp., pathogenic Escherichia coli, Salmonella spp., and Listeria monocytogenes; (2) multi-ingredient and ready-to-eat food related to Staphylococcus aureus; and (3) water associated with norovirus. Our findings emphasize the need to track the sources and contamination pathways of foodborne pathogens for more effective risk management.


Assuntos
Surtos de Doenças/estatística & dados numéricos , Microbiologia de Alimentos/estatística & dados numéricos , Doenças Transmitidas por Alimentos/epidemiologia , Animais , Campylobacter/patogenicidade , Escherichia coli/patogenicidade , Fast Foods/microbiologia , Contaminação de Alimentos/análise , Microbiologia de Alimentos/métodos , Doenças Transmitidas por Alimentos/microbiologia , Humanos , Listeria monocytogenes/patogenicidade , Gado/microbiologia , Norovirus/patogenicidade , Alimentos Crus/microbiologia , República da Coreia/epidemiologia , Medição de Risco/métodos , Gestão de Riscos/métodos , Salmonella/patogenicidade , Staphylococcus aureus/patogenicidade , Doenças Transmitidas pela Água/epidemiologia , Doenças Transmitidas pela Água/virologia
15.
Environ Health ; 14: 29, 2015 Mar 27.
Artigo em Inglês | MEDLINE | ID: mdl-25885050

RESUMO

Determining the role of weather in waterborne infections is a priority public health research issue as climate change is predicted to increase the frequency of extreme precipitation and temperature events. To document the current knowledge on this topic, we performed a literature review of analytical research studies that have combined epidemiological and meteorological data in order to analyze associations between extreme precipitation or temperature and waterborne disease.A search of the databases Ovid MEDLINE, EMBASE, SCOPUS and Web of Science was conducted, using search terms related to waterborne infections and precipitation or temperature. Results were limited to studies published in English between January 2001 and December 2013.Twenty-four articles were included in this review, predominantly from Asia and North-America. Four articles used waterborne outbreaks as study units, while the remaining articles used number of cases of waterborne infections. Results presented in the different articles were heterogeneous. Although most of the studies identified a positive association between increased precipitation or temperature and infection, there were several in which this association was not evidenced. A number of articles also identified an association between decreased precipitation and infections. This highlights the complex relationship between precipitation or temperature driven transmission and waterborne disease. We encourage researchers to conduct studies examining potential effect modifiers, such as the specific type of microorganism, geographical region, season, type of water supply, water source or water treatment, in order to assess how they modulate the relationship between heavy rain events or temperature and waterborne disease. Addressing these gaps is of primary importance in order to identify the areas where action is needed to minimize negative impact of climate change on health in the future.


Assuntos
Água Potável/microbiologia , Água Potável/parasitologia , Calor Extremo , Chuva , Doenças Transmitidas pela Água/epidemiologia , Mudança Climática , Água Potável/virologia , Humanos , Doenças Transmitidas pela Água/microbiologia , Doenças Transmitidas pela Água/parasitologia , Doenças Transmitidas pela Água/virologia
16.
J Microbiol Methods ; 180: 106091, 2021 01.
Artigo em Inglês | MEDLINE | ID: mdl-33137355

RESUMO

In June 2017, the Pennsylvania Department of Health (PADOH) was notified of multiple norovirus outbreaks associated with 179 ill individuals who attended separate events held at an outdoor venue and campground over a month period. Epidemiologic investigations were unable to identify a single exposure route and therefore unable to determine whether there was a persistent contamination source to target for exposure mitigation. Norovirus was detected in a fresh recreational water designated swimming area and a drinking water well. A hydrogeological site evaluation suggested a nearby septic leach field as a potential contamination source via ground water infiltration. Geological characterization revealed a steep dip of the bedrock beneath the septic leach field toward the well, providing a viral transport pathway in a geologic medium not previously documented as high risk for viral ground water contamination. The human-associated microbial source tracking (MST) genetic marker, HF183, was used as a microbial tracer to demonstrate the hydrogeological connection between the malfunctioning septic system, drinking water well, and recreational water area. Based on environmental investigation findings, venue management and local public health officials implemented a series of outbreak prevention strategies including discontinuing the use of the contaminated well, issuing a permit for a new drinking water well, increasing portable toilet and handwashing station availability, and promoting proper hand hygiene. Despite the outbreaks at the venue and evidence of ground water contamination impacting nearby recreational water and the drinking water well, no new norovirus cases were reported during a large event one week after implementing prevention practices. This investigation highlights a new application for human-associated MST methods to trace hydrological connections between multiple fecal pollutant exposure routes in an outbreak scenario. In turn, pollutant source information can be used to develop effective intervention practices to mitigate exposure and prevent future outbreaks associated with human fecal contaminated waters.


Assuntos
Surtos de Doenças , Norovirus/isolamento & purificação , Reação em Cadeia da Polimerase/métodos , Microbiologia da Água , Doenças Transmitidas pela Água/virologia , Tipagem de Bacteriófagos , Infecções por Caliciviridae/epidemiologia , Monitoramento Ambiental/métodos , Fezes , Água Doce/microbiologia , Água Doce/virologia , Genótipo , Água Subterrânea/virologia , Humanos , Técnicas Microbiológicas , Norovirus/genética , Pennsylvania/epidemiologia , Poluição da Água , Doenças Transmitidas pela Água/microbiologia
17.
J Microbiol ; 58(11): 915-925, 2020 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-32997302

RESUMO

Waterborne diseases have critical public health issues and socioeconomic relevancy worldwide. Various viral pathogens are ordinarily associated with waterborne diseases. Six-year-surveillance (a total of 20 times) of norovirus, hepatitis A virus, group C rotavirus, and enterovirus was conducted at five raw water sampling sites including two lakes (Lakes Soyang and Juam), Hyundo region of Geum River in Daejeon City, and Guui region of Han River in Seoul Metropolitan City and Moolgeum region of Nakdong River in Gimhae City which are located near two water intake plants. In this study, we routinely investigated virus contamination in water samples through reverse transcription polymerase chain reaction (RT-PCR) and integrated cell culture RT-PCR with high sensitivity and specificity. A total 100 samples were tested. Most of the targeted viruses were found in 32% of the samples and at least one of the indicator bacteria was detected in 65% of these occurrences. Among all the detected viruses, enterovirus was the most prevalent with a detection frequency of 12% and 2.71 MPN/10 L on average, while hepatitis A virus was the least prevalent with a detection frequency of 4%. Nearly all of the analyzed viruses (except for group C rotavirus) were present in samples from Han River (the Guui region), Geum River (the Hyundo region), Lake Juam, and Nakdong River (the Moolgeum region), while group C rotavirus was detected in those from the Guui region. During the six-year sampling period, the targeted waterborne viruses in water samples exhibited seasonal patterns in their occurrence that were different from the indicator bacteria levels in the water samples. The fact that they were detected in the five representative Korean water environments makes it necessary to establish the chemical and biological analysis systems for waterborne viruses and sophisticated management systems.


Assuntos
Monitoramento Ambiental , Lagos/virologia , Vírus , Microbiologia da Água , Doenças Transmitidas pela Água/virologia , Humanos , República da Coreia/epidemiologia , Vírus/classificação , Vírus/isolamento & purificação , Doenças Transmitidas pela Água/epidemiologia
18.
Sci Rep ; 10(1): 20786, 2020 11 27.
Artigo em Inglês | MEDLINE | ID: mdl-33247174

RESUMO

Variation in free-living microparasite survival can have a meaningful impact on the ecological dynamics of established and emerging infectious diseases. Nevertheless, resolving the importance of indirect and environmental transmission in the ecology of epidemics remains a persistent challenge. It requires accurately measuring the free-living survival of pathogens across reservoirs of various kinds and quantifying the extent to which interaction between hosts and reservoirs generates new infections. These questions are especially salient for emerging pathogens, where sparse and noisy data can obfuscate the relative contribution of different infection routes. In this study, we develop a mechanistic, mathematical model that permits both direct (host-to-host) and indirect (environmental) transmission and then fit this model to empirical data from 17 countries affected by an emerging virus (SARS-CoV-2). From an ecological perspective, our model highlights the potential for environmental transmission to drive complex, nonlinear dynamics during infectious disease outbreaks. Summarizing, we propose that fitting alternative models with indirect transmission to real outbreak data from SARS-CoV-2 can be useful, as it highlights that indirect mechanisms may play an underappreciated role in the dynamics of infectious diseases, with implications for public health.


Assuntos
COVID-19/epidemiologia , COVID-19/transmissão , Aerossóis , Reservatórios de Doenças/virologia , Meio Ambiente , Modelos Teóricos , SARS-CoV-2/fisiologia , Doenças Transmitidas pela Água/transmissão , Doenças Transmitidas pela Água/virologia
19.
Artigo em Inglês | MEDLINE | ID: mdl-30634384

RESUMO

Infectious agents, including bacteria, viruses, protozoa, and molds, may threaten the health of swimming pool bathers. Viruses are a major cause of recreationally-associated waterborne diseases linked to pools, lakes, ponds, thermal pools/spas, rivers, and hot springs. They can make their way into waters through the accidental release of fecal matter, body fluids (saliva, mucus), or skin flakes by symptomatic or asymptomatic carriers. We present an updated overview of epidemiological data on viral outbreaks, a project motivated, among other things, by the availability of improved viral detection methodologies. Special attention is paid to outbreak investigations (source of the outbreak, pathways of transmission, chlorination/disinfection). Epidemiological studies on incidents of viral contamination of swimming pools under non-epidemic conditions are also reviewed.


Assuntos
Piscinas , Viroses/diagnóstico , Vírus/isolamento & purificação , Doenças Transmitidas pela Água/virologia , Surtos de Doenças/prevenção & controle , Humanos , Viroses/epidemiologia , Viroses/prevenção & controle , Viroses/transmissão , Microbiologia da Água , Doenças Transmitidas pela Água/epidemiologia , Doenças Transmitidas pela Água/prevenção & controle , Doenças Transmitidas pela Água/transmissão
20.
Viruses ; 10(2)2018 02 02.
Artigo em Inglês | MEDLINE | ID: mdl-29393885

RESUMO

Eukaryotic virus-bacteria interactions have recently become an emerging topic of study due to multiple significant examples related to human pathogens of clinical interest. However, such omnipresent and likely important interactions for viruses and bacteria relevant to the applied and agricultural sciences have not been reviewed or compiled. The fundamental basis of this review is that these interactions have importance and deserve more investigation, as numerous potential consequences and applications arising from their discovery are relevant to the applied sciences. The purpose of this review is to highlight and summarize eukaryotic virus-bacteria findings in the food/water, horticultural, and animal sciences. In many cases in the agricultural sciences, mechanistic understandings of the effects of virus-bacteria interactions remain unstudied, and many studies solely focus on co-infections of bacterial and viral pathogens. Given recent findings relative to human viral pathogens, further research related to virus-bacteria interactions would likely result in numerous discoveries and beneficial applications.


Assuntos
Fenômenos Fisiológicos Bacterianos , Interações Microbianas , Fenômenos Fisiológicos Virais , Agricultura , Animais , Coinfecção , Doenças Transmitidas por Alimentos/microbiologia , Doenças Transmitidas por Alimentos/virologia , Humanos , Doenças Transmitidas pela Água/microbiologia , Doenças Transmitidas pela Água/virologia
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