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TITAN: inference of copy number architectures in clonal cell populations from tumor whole-genome sequence data.
Ha, Gavin; Roth, Andrew; Khattra, Jaswinder; Ho, Julie; Yap, Damian; Prentice, Leah M; Melnyk, Nataliya; McPherson, Andrew; Bashashati, Ali; Laks, Emma; Biele, Justina; Ding, Jiarui; Le, Alan; Rosner, Jamie; Shumansky, Karey; Marra, Marco A; Gilks, C Blake; Huntsman, David G; McAlpine, Jessica N; Aparicio, Samuel; Shah, Sohrab P.
Afiliação
  • Ha G; Department of Molecular Oncology, British Columbia Cancer Agency, Vancouver, BC V5Z 1L3, Canada; Bioinformatics Training Program, University of British Columbia, Vancouver, BC V5Z 4S6, Canada; sshah@bccrc.ca.
  • Roth A; Department of Molecular Oncology, British Columbia Cancer Agency, Vancouver, BC V5Z 1L3, Canada; Bioinformatics Training Program, University of British Columbia, Vancouver, BC V5Z 4S6, Canada;
  • Khattra J; Department of Molecular Oncology, British Columbia Cancer Agency, Vancouver, BC V5Z 1L3, Canada;
  • Ho J; Centre for Translational and Applied Genomics, Vancouver, BC V5Z 4E6, Canada;
  • Yap D; Department of Molecular Oncology, British Columbia Cancer Agency, Vancouver, BC V5Z 1L3, Canada;
  • Prentice LM; Centre for Translational and Applied Genomics, Vancouver, BC V5Z 4E6, Canada;
  • Melnyk N; Centre for Translational and Applied Genomics, Vancouver, BC V5Z 4E6, Canada;
  • McPherson A; Department of Molecular Oncology, British Columbia Cancer Agency, Vancouver, BC V5Z 1L3, Canada; Bioinformatics Training Program, University of British Columbia, Vancouver, BC V5Z 4S6, Canada;
  • Bashashati A; Department of Molecular Oncology, British Columbia Cancer Agency, Vancouver, BC V5Z 1L3, Canada;
  • Laks E; Department of Molecular Oncology, British Columbia Cancer Agency, Vancouver, BC V5Z 1L3, Canada;
  • Biele J; Department of Molecular Oncology, British Columbia Cancer Agency, Vancouver, BC V5Z 1L3, Canada;
  • Ding J; Department of Molecular Oncology, British Columbia Cancer Agency, Vancouver, BC V5Z 1L3, Canada; Department of Computer Science, University of British Columbia, Vancouver, BC V6T 1Z4, Canada;
  • Le A; Department of Molecular Oncology, British Columbia Cancer Agency, Vancouver, BC V5Z 1L3, Canada;
  • Rosner J; Department of Molecular Oncology, British Columbia Cancer Agency, Vancouver, BC V5Z 1L3, Canada;
  • Shumansky K; Department of Molecular Oncology, British Columbia Cancer Agency, Vancouver, BC V5Z 1L3, Canada;
  • Marra MA; Genome Sciences Centre, British Columbia Cancer Agency, Vancouver, BC V5Z 1L3, Canada;
  • Gilks CB; Genetic Pathology Evaluation Centre, Vancouver General Hospital, Vancouver, BC V6H 3Z6, Canada;
  • Huntsman DG; Centre for Translational and Applied Genomics, Vancouver, BC V5Z 4E6, Canada; Department of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, BC V6T 2B5, Canada;
  • McAlpine JN; Department of Gynecology and Obstetrics, University of British Columbia, Vancouver, BC V5Z 1M9, Canada.
  • Aparicio S; Department of Molecular Oncology, British Columbia Cancer Agency, Vancouver, BC V5Z 1L3, Canada; Department of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, BC V6T 2B5, Canada;
  • Shah SP; Department of Molecular Oncology, British Columbia Cancer Agency, Vancouver, BC V5Z 1L3, Canada; Department of Computer Science, University of British Columbia, Vancouver, BC V6T 1Z4, Canada; Department of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, BC V6T 2B5, Cana
Genome Res ; 24(11): 1881-93, 2014 Nov.
Article em En | MEDLINE | ID: mdl-25060187
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Texto completo: 1 Base de dados: MEDLINE Assunto principal: Algoritmos / Biologia Computacional / Variações do Número de Cópias de DNA / Modelos Genéticos / Neoplasias Tipo de estudo: Prognostic_studies Limite: Female / Humans Idioma: En Ano de publicação: 2014 Tipo de documento: Article
Texto completo
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XML
PubMed Links
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Texto completo: 1 Base de dados: MEDLINE Assunto principal: Algoritmos / Biologia Computacional / Variações do Número de Cópias de DNA / Modelos Genéticos / Neoplasias Tipo de estudo: Prognostic_studies Limite: Female / Humans Idioma: En Ano de publicação: 2014 Tipo de documento: Article