Connecting MetaProteomeAnalyzer and PeptideShaker to Unipept for Seamless End-to-End Metaproteomics Data Analysis.
J Proteome Res
; 19(8): 3562-3566, 2020 08 07.
Article
em En
| MEDLINE
| ID: mdl-32431147
ABSTRACT
Although metaproteomics, the study of the collective proteome of microbial communities, has become increasingly powerful and popular over the past few years, the field has lagged behind on the availability of user-friendly, end-to-end pipelines for data analysis. We therefore describe the connection from two commonly used metaproteomics data processing tools in the field, MetaProteomeAnalyzer and PeptideShaker, to Unipept for downstream analysis. Through these connections, direct end-to-end pipelines are built from database searching to taxonomic and functional annotation.
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Base de dados:
MEDLINE
Assunto principal:
Microbiota
/
Análise de Dados
Idioma:
En
Ano de publicação:
2020
Tipo de documento:
Article