Genome analysis provides insights into the biocontrol ability of Mitsuaria sp. strain TWR114.
Arch Microbiol
; 203(6): 3373-3388, 2021 Aug.
Article
em En
| MEDLINE
| ID: mdl-33880605
ABSTRACT
Mitsuaria sp. TWR114 is a biocontrol agent against tomato bacterial wilt (TBW). We aimed to gain genomic insights relevant to the biocontrol mechanisms and colonization ability of this strain. The draft genome size was found to be 5,632,523 bp, with a GC content of 69.5%, assembled into 1144 scaffolds. Genome annotation predicted a total of 4675 protein coding sequences (CDSs), 914 pseudogenes, 49 transfer RNAs, 3 noncoding RNAs, and 2 ribosomal RNAs. Genome analysis identified multiple CDSs associated with various pathways for the metabolism and transport of amino acids and carbohydrates, motility and chemotactic capacities, protection against stresses (oxidative, antibiotic, and phage), production of secondary metabolites, peptidases, quorum-quenching enzymes, and indole-3-acetic acid, as well as protein secretion systems and their related appendages. The genome resource will extend our understanding of the genomic features related to TWR114's biocontrol and colonization abilities and facilitate its development as a new biopesticide against TBW.
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MEDLINE
Assunto principal:
Doenças das Plantas
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Genoma Bacteriano
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Solanum lycopersicum
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Agentes de Controle Biológico
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Burkholderiales
Idioma:
En
Ano de publicação:
2021
Tipo de documento:
Article