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Experimental-theoretical study of laccase as a detoxifier of aflatoxins.
Zaccaria, Marco; Dawson, William; Russel Kish, Darius; Reverberi, Massimo; Bonaccorsi di Patti, Maria Carmela; Domin, Marek; Cristiglio, Viviana; Chan, Bun; Dellafiora, Luca; Gabel, Frank; Nakajima, Takahito; Genovese, Luigi; Momeni, Babak.
Afiliação
  • Zaccaria M; Department of Biology, Boston College, Chestnut Hill, MA, 02467, USA.
  • Dawson W; RIKEN Center for Computational Science, Kobe, 6500047, Japan.
  • Russel Kish D; Department of Biology, Boston College, Chestnut Hill, MA, 02467, USA.
  • Reverberi M; Department of Environmental and Evolutionary Biology, "Sapienza" University of Rome, 00185, Rome, Italy.
  • Bonaccorsi di Patti MC; Department of Biochemical Sciences "Alessandro Rossi Fanelli", "Sapienza" University of Rome, 00185, Rome, Italy.
  • Domin M; Department of Chemistry, Boston College, Chestnut Hill, MA, 02467, USA.
  • Cristiglio V; Institut Laue-Langevin, 38042, Grenoble, France.
  • Chan B; RIKEN Center for Computational Science, Kobe, 6500047, Japan.
  • Dellafiora L; Graduate School of Engineering, Nagasaki University, Nagasaki, 8528521, Japan.
  • Gabel F; Department of Food and Drug, University of Parma, 43124, Parma, Italy.
  • Nakajima T; CEA/CNRS/IBS, University Grenoble Alpes, 38044, Grenoble, France.
  • Genovese L; RIKEN Center for Computational Science, Kobe, 6500047, Japan.
  • Momeni B; CEA/INAC-MEM/L-Sim, University Grenoble Alpes, 38044, Grenoble, France.
Sci Rep ; 13(1): 860, 2023 01 17.
Article em En | MEDLINE | ID: mdl-36650163
ABSTRACT
We investigate laccase-mediated detoxification of aflatoxins, fungal carcinogenic food contaminants. Our experimental comparison between two aflatoxins with similar structures (AFB1 and AFG2) shows significant differences in laccase-mediated detoxification. A multi-scale modeling approach (Docking, Molecular Dynamics, and Density Functional Theory) identifies the highly substrate-specific changes required to improve laccase detoxifying performance. We employ a large-scale density functional theory-based approach, involving more than 7000 atoms, to identify the amino acid residues that determine the affinity of laccase for aflatoxins. From this study we conclude (1) AFB1 is more challenging to degrade, to the point of complete degradation stalling; (2) AFG2 is easier to degrade by laccase due to its lack of side products and favorable binding dynamics; and (3) ample opportunities to optimize laccase for aflatoxin degradation exist, especially via mutations leading to π-π stacking. This study identifies a way to optimize laccase for aflatoxin bioremediation and, more generally, contributes to the research efforts aimed at rational enzyme optimization.
Assuntos

Texto completo: 1 Base de dados: MEDLINE Assunto principal: Aflatoxinas Idioma: En Ano de publicação: 2023 Tipo de documento: Article

Texto completo: 1 Base de dados: MEDLINE Assunto principal: Aflatoxinas Idioma: En Ano de publicação: 2023 Tipo de documento: Article