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cProSite: A web based interactive platform for online proteomics, phosphoproteomics, and genomics data analysis.
Wang, Dunrui; Qian, Xiaolan; Du, Yi-Chieh Nancy; Sanchez-Solana, Beatriz; Chen, Kailing; Kanigicherla, Madhu; Jenkins, Lisa M; Luo, Jason; Eng, Sarah; Park, Brian; Chen, Ben; Yao, Xiaozheng; Nguyen, Thuong; Tripathi, Brajendra K; Durkin, Marian E; Lowy, Douglas R.
Afiliação
  • Wang D; Laboratory of Cellular Oncology, National Cancer Institute, National Institutes of Health, Bethesda, MD.
  • Qian X; Laboratory of Cellular Oncology, National Cancer Institute, National Institutes of Health, Bethesda, MD.
  • Du YN; Department of Pathology and Laboratory Medicine, Weill Cornell Medicine, New York, NY.
  • Sanchez-Solana B; Laboratory of Cellular Oncology, National Cancer Institute, National Institutes of Health, Bethesda, MD.
  • Chen K; Center for Biomedical Informatics and Information Technology, National Cancer Institute, Rockville, MD.
  • Kanigicherla M; Center for Biomedical Informatics and Information Technology, National Cancer Institute, Rockville, MD.
  • Jenkins LM; Collaborative Protein Technology Resource, National Cancer Institute, National Institutes of Health, Bethesda, MD.
  • Luo J; Laboratory of Cellular Oncology, National Cancer Institute, National Institutes of Health, Bethesda, MD.
  • Eng S; Laboratory of Cellular Oncology, National Cancer Institute, National Institutes of Health, Bethesda, MD.
  • Park B; Center for Biomedical Informatics and Information Technology, National Cancer Institute, Rockville, MD.
  • Chen B; Center for Biomedical Informatics and Information Technology, National Cancer Institute, Rockville, MD.
  • Yao X; Center for Biomedical Informatics and Information Technology, National Cancer Institute, Rockville, MD.
  • Nguyen T; Center for Biomedical Informatics and Information Technology, National Cancer Institute, Rockville, MD.
  • Tripathi BK; Laboratory of Cellular Oncology, National Cancer Institute, National Institutes of Health, Bethesda, MD.
  • Durkin ME; Laboratory of Cellular Oncology, National Cancer Institute, National Institutes of Health, Bethesda, MD.
  • Lowy DR; Laboratory of Cellular Oncology, National Cancer Institute, National Institutes of Health, Bethesda, MD.
J Biotechnol Biomed ; 6(4): 573-578, 2023.
Article em En | MEDLINE | ID: mdl-38938288
ABSTRACT
We developed cProSite, a website that provides online genomics, proteomics, and phosphoproteomics analysis for the data of The National Cancer Institute's Clinical Proteomic Tumor Analysis Consortium (CPTAC). This tool focuses on comparisons and correlations between different proteins and mRNAs of tumors and normal tissues. Our website is designed with biologists and clinicians in mind, with a user-friendly environment and fast search engine. The search results of cProSite can be used for clinical data validation and provide useful strategic information to identify drug targets at proteomic, phosphoproteomic, or genomic levels. The site is available at http//cprosite.ccr.cancer.gov.

Texto completo: 1 Base de dados: MEDLINE Idioma: En Ano de publicação: 2023 Tipo de documento: Article

Texto completo: 1 Base de dados: MEDLINE Idioma: En Ano de publicação: 2023 Tipo de documento: Article