A variant on the CREST iMTD algorithm for noncovalent clusters of flexible molecules.
J Comput Chem
; 45(29): 2431-2445, 2024 Nov 05.
Article
em En
| MEDLINE
| ID: mdl-38944673
ABSTRACT
Conformational ensemble generation and the search for the global minimum conformation are important problems in computational chemistry. In this work, a variant on the conformer-rotamer ensemble sampling tool (CREST) iterative metadynamics (iMTD) algorithm designed for determining structural ensembles and energetics of noncovalent clusters of flexible molecules is presented. We term this new algorithm a low-energy diversity-enhanced variant on CREST, or LEDE-CREST. As with CREST, the energies are evaluated using the semiempirical GFN2-xTB extended tight binding approach. The utility of the algorithm is highlighted by generating ensembles for a variety of noncovalent clusters of flexible or rigid monomers using both CREST and LEDE-CREST.
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MEDLINE
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En
Ano de publicação:
2024
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Article