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Metagenomics approach to identify lignocellulose-degrading enzymes in the gut microbiota of the Chinese bamboo rat cecum
Bai, Ding-Ping; Lin, Xin-Yu; Hu, Yu-Qiong; Chen, Zhen-Zhen; Chen, Lu; Huang, Yi-Fan; Huang, Xiao-Hong; Li, Jian.
  • Bai, Ding-Ping; Fujian Agricultural and Forestry University. College of Animal Sciences. Fuzhou. CN
  • Lin, Xin-Yu; Fujian Agricultural and Forestry University. College of Animal Sciences. Fuzhou. CN
  • Hu, Yu-Qiong; Fujian Agricultural and Forestry University. College of Animal Sciences. Fuzhou. CN
  • Chen, Zhen-Zhen; Fujian Agricultural and Forestry University. College of Animal Sciences. Fuzhou. CN
  • Chen, Lu; Fujian Agricultural and Forestry University. College of Animal Sciences. Fuzhou. CN
  • Huang, Yi-Fan; Fujian Key Laboratory of Traditional Chinese Veterinary Medicine and Animal Health. Fuzhou. CN
  • Huang, Xiao-Hong; University Key Laboratory for Integrated Chinese Traditional and Western Veterinary Medicine and Animal Healthcare in Fujian Province. Fuzhou. CN
  • Li, Jian; University Key Laboratory for Integrated Chinese Traditional and Western Veterinary Medicine and Animal Healthcare in Fujian Province. Fuzhou. CN
Electron. j. biotechnol ; 50: 29-36, Mar. 2021. tab, graf
Article in English | LILACS | ID: biblio-1292313
ABSTRACT

BACKGROUND:

Lignocellulose is considered a renewable organic material, but the industrial production of biofuel from lignocellulose is challenging because of the lack of highly active hydrolytic enzymes. The guts of herbivores contain many symbiotic microorganisms that have evolved to hydrolyze plant lignocellulose. Chinese bamboo rats mainly consume high-fiber foods, indicating that some members of the intestinal tract microbiota digest lignocellulose, providing these rats with the energy required for growth.

RESULTS:

Here, we used metagenomics to analyze the diversity and functions of the gut microbiota in Chinese bamboo rats. We identified abundant populations of lignocellulose-degrading bacteria, whose main functions involved carbohydrate, amino acid, and nucleic acid metabolism. We also found 587 carbohydrate-active enzyme genes belonging to different families, including 7 carbohydrate esterase families and 21 glycoside hydrolase families. The glycoside hydrolase 3, glycoside hydrolase 1, glycoside hydrolase 43, carbohydrate esterase 4, carbohydrate esterase 1, and carbohydrate esterase 3 families demonstrated outstanding performance.

CONCLUSIONS:

The microbes and enzymes identified in our study expand the existing arsenal of proficient degraders and enzymes for lignocellulosic biofuel production. This study also describes a powerful approach for targeting gut microbes and enzymes in numerous industries.
Subject(s)


Full text: Available Index: LILACS (Americas) Main subject: Cecum / Enzymes / Lignin Limits: Animals Language: English Journal: Electron. j. biotechnol Journal subject: Biotechnology Year: 2021 Type: Article Affiliation country: China Institution/Affiliation country: Fujian Agricultural and Forestry University/CN / Fujian Key Laboratory of Traditional Chinese Veterinary Medicine and Animal Health/CN / University Key Laboratory for Integrated Chinese Traditional and Western Veterinary Medicine and Animal Healthcare in Fujian Province/CN

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Full text: Available Index: LILACS (Americas) Main subject: Cecum / Enzymes / Lignin Limits: Animals Language: English Journal: Electron. j. biotechnol Journal subject: Biotechnology Year: 2021 Type: Article Affiliation country: China Institution/Affiliation country: Fujian Agricultural and Forestry University/CN / Fujian Key Laboratory of Traditional Chinese Veterinary Medicine and Animal Health/CN / University Key Laboratory for Integrated Chinese Traditional and Western Veterinary Medicine and Animal Healthcare in Fujian Province/CN