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SARS-CoV-2 variant of concern P.1 (Gamma) infection in young and middle-aged patients admitted to the intensive care units of a single hospital in Salvador, Northeast Brazil, February 2021.
Nonaka, Carolina Kymie Vasques; Gräf, Tiago; Barcia, Camila Araújo de Lorenzo; Costa, Vanessa Ferreira; de Oliveira, Janderson Lopes; Passos, Rogério da Hora; Bastos, Iasmin Nogueira; de Santana, Maria Clara Brito; Santos, Ian Marinho; de Sousa, Karoline Almeida Felix; Weber, Thamires Gomes Lopes; Siqueira, Isadora Cristina de; Rocha, Clarissa Araújo Gurgel; Mendes, Ana Verena Almeida; Souza, Bruno Solano de Freitas.
  • Nonaka CKV; Center for Biotechnology and Cell Therapy, São Rafael Hospital, Salvador, Brazil; D'Or Institute for Research and Education (IDOR), Salvador, Brazil.
  • Gräf T; Gonçalo Moniz Institute, FIOCRUZ, Salvador, Brazil.
  • Barcia CAL; Department of Infectology, São Rafael Hospital, Salvador, Brazil.
  • Costa VF; Center for Biotechnology and Cell Therapy, São Rafael Hospital, Salvador, Brazil.
  • de Oliveira JL; Center for Biotechnology and Cell Therapy, São Rafael Hospital, Salvador, Brazil.
  • Passos RDH; Intensive Care Unit, São Rafael Hospital, Salvador, Brazil.
  • Bastos IN; Gonçalo Moniz Institute, FIOCRUZ, Salvador, Brazil.
  • de Santana MCB; Gonçalo Moniz Institute, FIOCRUZ, Salvador, Brazil.
  • Santos IM; Center for Biotechnology and Cell Therapy, São Rafael Hospital, Salvador, Brazil; Gonçalo Moniz Institute, FIOCRUZ, Salvador, Brazil.
  • de Sousa KAF; Gonçalo Moniz Institute, FIOCRUZ, Salvador, Brazil.
  • Weber TGL; Clinical Laboratory, São Rafael Hospital, Salvador, Brazil.
  • Siqueira IC; Gonçalo Moniz Institute, FIOCRUZ, Salvador, Brazil.
  • Rocha CAG; Center for Biotechnology and Cell Therapy, São Rafael Hospital, Salvador, Brazil; D'Or Institute for Research and Education (IDOR), Salvador, Brazil; Gonçalo Moniz Institute, FIOCRUZ, Salvador, Brazil.
  • Mendes AVA; Department of Infectology, São Rafael Hospital, Salvador, Brazil.
  • Souza BSF; Center for Biotechnology and Cell Therapy, São Rafael Hospital, Salvador, Brazil; D'Or Institute for Research and Education (IDOR), Salvador, Brazil; Gonçalo Moniz Institute, FIOCRUZ, Salvador, Brazil. Electronic address: bruno.solano@fiocruz.br.
Int J Infect Dis ; 111: 47-54, 2021 Oct.
Article in English | MEDLINE | ID: covidwho-2113756
ABSTRACT

OBJECTIVES:

To evaluate changes in the characteristics of patients with coronavirus disease 2019 (COVID-19) after the emergence of the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) variant of concern (VOC) P.1 (Gamma), by comparing the clinical, demographic, and laboratory profiles of patients hospitalized during the first (May to July 2020) and second (December 2020 to February 2021) pandemic waves.

METHODS:

Data were collected from the records of COVID-19 patients (n = 4164) admitted to a single hospital in Salvador, Northeast Brazil. SARS-CoV-2 genome sequencing was performed on nasopharyngeal swab samples from 12 patients aged <60 years admitted to the intensive care unit (ICU) in February 2021.

RESULTS:

Between June 2020 and February 2021, the median age of patients admitted to the ICU decreased from 66 to 58 years (P < 0.05). This was accompanied by an increased proportion of patients without comorbidities (15.32% vs 32.20%, P < 0.0001). A significant reduction in the cycle threshold values of SARS-CoV-2 RT-PCR tests was observed in the second wave (P < 0.0001). Sequencing analysis detected lineage Gamma in all 12 ICU patients sampled in February 2021.

CONCLUSIONS:

The results of this study demonstrated an increased proportion of younger adults without comorbidities with severe disease during the second COVID-19 wave, shortly after the confirmation of local Gamma circulation.
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Full text: Available Collection: International databases Database: MEDLINE Main subject: SARS-CoV-2 / COVID-19 Type of study: Experimental Studies / Observational study / Prognostic study Topics: Variants Limits: Adult / Humans / Middle aged Country/Region as subject: South America / Brazil Language: English Journal: Int J Infect Dis Journal subject: Communicable Diseases Year: 2021 Document Type: Article Affiliation country: J.ijid.2021.08.003

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Full text: Available Collection: International databases Database: MEDLINE Main subject: SARS-CoV-2 / COVID-19 Type of study: Experimental Studies / Observational study / Prognostic study Topics: Variants Limits: Adult / Humans / Middle aged Country/Region as subject: South America / Brazil Language: English Journal: Int J Infect Dis Journal subject: Communicable Diseases Year: 2021 Document Type: Article Affiliation country: J.ijid.2021.08.003