Search details
1.
Information Integration and Energy Expenditure in Gene Regulation.
Cell
; 166(1): 234-44, 2016 Jun 30.
Article
in English
| MEDLINE | ID: mdl-27368104
2.
The Hill function is the universal Hopfield barrier for sharpness of input-output responses.
Proc Natl Acad Sci U S A
; 121(22): e2318329121, 2024 May 28.
Article
in English
| MEDLINE | ID: mdl-38787881
3.
MSModDetector: A Tool for Detecting Mass Shifts and Post-Translational Modifications in Individual Ion Mass Spectrometry Data.
Bioinformatics
; 2024 May 25.
Article
in English
| MEDLINE | ID: mdl-38796681
4.
Thermodynamic bounds on ultrasensitivity in covalent switching.
Biophys J
; 122(10): 1833-1845, 2023 05 16.
Article
in English
| MEDLINE | ID: mdl-37081788
5.
Robustness and parameter geography in post-translational modification systems.
PLoS Comput Biol
; 16(5): e1007573, 2020 05.
Article
in English
| MEDLINE | ID: mdl-32365103
6.
Structural conditions on complex networks for the Michaelis-Menten input-output response.
Proc Natl Acad Sci U S A
; 115(39): 9738-9743, 2018 09 25.
Article
in English
| MEDLINE | ID: mdl-30194237
7.
How many human proteoforms are there?
Nat Chem Biol
; 14(3): 206-214, 2018 02 14.
Article
in English
| MEDLINE | ID: mdl-29443976
8.
Lack of evidence for substrate channeling or flux between wildtype and mutant isocitrate dehydrogenase to produce the oncometabolite 2-hydroxyglutarate.
J Biol Chem
; 293(52): 20051-20061, 2018 12 28.
Article
in English
| MEDLINE | ID: mdl-30381394
9.
Monostationarity and Multistationarity in Tree Networks of Goldbeter-Koshland Loops.
Bull Math Biol
; 81(7): 2463-2509, 2019 07.
Article
in English
| MEDLINE | ID: mdl-31218553
10.
Estimating the Distribution of Protein Post-Translational Modification States by Mass Spectrometry.
J Proteome Res
; 17(8): 2727-2734, 2018 08 03.
Article
in English
| MEDLINE | ID: mdl-29945451
11.
Characterization of Neuronal Tau Protein as a Target of Extracellular Signal-regulated Kinase.
J Biol Chem
; 291(14): 7742-53, 2016 Apr 01.
Article
in English
| MEDLINE | ID: mdl-26858248
12.
Cellular Interrogation: Exploiting Cell-to-Cell Variability to Discriminate Regulatory Mechanisms in Oscillatory Signalling.
PLoS Comput Biol
; 12(7): e1004995, 2016 07.
Article
in English
| MEDLINE | ID: mdl-27367445
13.
A fundamental trade-off in covalent switching and its circumvention by enzyme bifunctionality in glucose homeostasis.
J Biol Chem
; 289(19): 13010-25, 2014 May 09.
Article
in English
| MEDLINE | ID: mdl-24634222
14.
Unlimited multistability in multisite phosphorylation systems.
Nature
; 460(7252): 274-7, 2009 Jul 09.
Article
in English
| MEDLINE | ID: mdl-19536158
15.
Models in biology: 'accurate descriptions of our pathetic thinking'.
BMC Biol
; 12: 29, 2014 Apr 30.
Article
in English
| MEDLINE | ID: mdl-24886484
16.
A framework for modelling gene regulation which accommodates non-equilibrium mechanisms.
BMC Biol
; 12: 102, 2014 Dec 05.
Article
in English
| MEDLINE | ID: mdl-25475875
17.
Paradoxical results in perturbation-based signaling network reconstruction.
Biophys J
; 106(12): 2720-8, 2014 Jun 17.
Article
in English
| MEDLINE | ID: mdl-24940789
18.
Dimerization and bifunctionality confer robustness to the isocitrate dehydrogenase regulatory system in Escherichia coli.
J Biol Chem
; 288(8): 5770-8, 2013 Feb 22.
Article
in English
| MEDLINE | ID: mdl-23192354
19.
The Hill function is the universal Hopfield barrier for sharpness of input-output responses.
bioRxiv
; 2024 Mar 28.
Article
in English
| MEDLINE | ID: mdl-38585761
20.
Proteus: a web-based, context-specific modelling tool for molecular networks.
Bioinformatics
; 28(9): 1284-6, 2012 May 01.
Article
in English
| MEDLINE | ID: mdl-22426344