Search details
1.
Accurate expression quantification from nanopore direct RNA sequencing with NanoCount.
Nucleic Acids Res
; 50(4): e19, 2022 02 28.
Article
in English
| MEDLINE | ID: mdl-34850115
2.
Nanopore ReCappable sequencing maps SARS-CoV-2 5' capping sites and provides new insights into the structure of sgRNAs.
Nucleic Acids Res
; 50(6): 3475-3489, 2022 04 08.
Article
in English
| MEDLINE | ID: mdl-35244721
3.
Chemical and photochemical error rates in light-directed synthesis of complex DNA libraries.
Nucleic Acids Res
; 49(12): 6687-6701, 2021 07 09.
Article
in English
| MEDLINE | ID: mdl-34157124
4.
pycoMeth: a toolbox for differential methylation testing from Nanopore methylation calls.
Genome Biol
; 24(1): 83, 2023 04 20.
Article
in English
| MEDLINE | ID: mdl-37081487
5.
Natural genetic variation quantitatively regulates heart rate and dimension.
bioRxiv
; 2023 Nov 02.
Article
in English
| MEDLINE | ID: mdl-37693611
6.
Long-read sequencing of diagnosis and post-therapy medulloblastoma reveals complex rearrangement patterns and epigenetic signatures.
Cell Genom
; 3(4): 100281, 2023 Apr 12.
Article
in English
| MEDLINE | ID: mdl-37082141
7.
The Medaka Inbred Kiyosu-Karlsruhe (MIKK) panel.
Genome Biol
; 23(1): 59, 2022 02 21.
Article
in English
| MEDLINE | ID: mdl-35189950
8.
Genomic variations and epigenomic landscape of the Medaka Inbred Kiyosu-Karlsruhe (MIKK) panel.
Genome Biol
; 23(1): 58, 2022 02 21.
Article
in English
| MEDLINE | ID: mdl-35189951
9.
Nanopore RNA Sequencing Analysis.
Methods Mol Biol
; 2284: 569-578, 2021.
Article
in English
| MEDLINE | ID: mdl-33835464
10.
AAV8 locoregional delivery induces long-term expression of an immunogenic transgene in macaques despite persisting local inflammation.
Mol Ther Methods Clin Dev
; 20: 660-674, 2021 Mar 12.
Article
in English
| MEDLINE | ID: mdl-33718516
11.
RNA modifications detection by comparative Nanopore direct RNA sequencing.
Nat Commun
; 12(1): 7198, 2021 12 10.
Article
in English
| MEDLINE | ID: mdl-34893601
12.
Single-Stranded DNA Virus Sequencing (SSV-Seq) for Characterization of Residual DNA and AAV Vector Genomes.
Methods Mol Biol
; 1950: 85-106, 2019.
Article
in English
| MEDLINE | ID: mdl-30783969
13.
Genetics instability of wtAAV2 genome and AAV promoter activities in the Baculovirus/Sf9 cells system.
PLoS One
; 13(7): e0199866, 2018.
Article
in English
| MEDLINE | ID: mdl-29975713
14.
RNA-Seq Analysis of an Antisense Sequence Optimized for Exon Skipping in Duchenne Patients Reveals No Off-Target Effect.
Mol Ther Nucleic Acids
; 10: 277-291, 2018 Mar 02.
Article
in English
| MEDLINE | ID: mdl-29499940
15.
Accurate Identification and Quantification of DNA Species by Next-Generation Sequencing in Adeno-Associated Viral Vectors Produced in Insect Cells.
Hum Gene Ther Methods
; 28(3): 148-162, 2017 06.
Article
in English
| MEDLINE | ID: mdl-28463571
16.
Identification of miRNAs Involved in Reprogramming Acinar Cells into Insulin Producing Cells.
PLoS One
; 10(12): e0145116, 2015.
Article
in English
| MEDLINE | ID: mdl-26690959
17.
Advanced Characterization of DNA Molecules in rAAV Vector Preparations by Single-stranded Virus Next-generation Sequencing.
Mol Ther Nucleic Acids
; 4: e260, 2015 Oct 27.
Article
in English
| MEDLINE | ID: mdl-26506038
18.
Short-lived recombinant adeno-associated virus transgene expression in dystrophic muscle is associated with oxidative damage to transgene mRNA.
Mol Ther Methods Clin Dev
; 2: 15010, 2015.
Article
in English
| MEDLINE | ID: mdl-26029721
19.
Adeno-associated viral vector-mediated transgene expression is independent of DNA methylation in primate liver and skeletal muscle.
PLoS One
; 6(6): e20881, 2011.
Article
in English
| MEDLINE | ID: mdl-21687632
20.
NGS library preparation may generate artifactual integration sites of AAV vectors.
Nat Med
; 20(6): 577-8, 2014 Jun.
Article
in English
| MEDLINE | ID: mdl-24901560
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