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1.
Comparison of Illumina and Oxford Nanopore Technology for genome analysis of Francisella tularensis, Bacillus anthracis, and Brucella suis.
BMC Genomics
; 24(1): 258, 2023 May 12.
Article
in English
| MEDLINE | ID: mdl-37173617
2.
Whole genome sequencing of Salmonella enterica serovars isolated from humans, animals, and the environment in Lagos, Nigeria.
BMC Microbiol
; 23(1): 164, 2023 06 13.
Article
in English
| MEDLINE | ID: mdl-37312043
3.
[Assessment of available and currently applied typing methods including genome-based methods for zoonotic pathogens with a focus on Salmonella enterica]. / Bestandsaufnahme der verfügbaren und aktuell eingesetzten Typisierungsmethoden einschließlich genombasierter Verfahren von Zoonoseerregern am Beispiel von Salmonella enterica.
Bundesgesundheitsblatt Gesundheitsforschung Gesundheitsschutz
; 66(1): 75-83, 2023 Jan.
Article
in German
| MEDLINE | ID: mdl-36547697
4.
The fungivorous amoeba Protostelium aurantium targets redox homeostasis and cell wall integrity during intracellular killing of Candida parapsilosis.
Cell Microbiol
; 23(11): e13389, 2021 11.
Article
in English
| MEDLINE | ID: mdl-34460149
5.
Sequence Analysis of Novel Staphylococcus aureus Lineages from Wild and Captive Macaques.
Int J Mol Sci
; 23(19)2022 Sep 23.
Article
in English
| MEDLINE | ID: mdl-36232529
6.
A Whole-Genome-Based Gene-by-Gene Typing System for Standardized High-Resolution Strain Typing of Bacillus anthracis.
J Clin Microbiol
; 59(7): e0288920, 2021 06 18.
Article
in English
| MEDLINE | ID: mdl-33827898
7.
Comparative Genomics of Serial Candida glabrata Isolates and the Rapid Acquisition of Echinocandin Resistance during Therapy.
Antimicrob Agents Chemother
; 63(2)2019 02.
Article
in English
| MEDLINE | ID: mdl-30478162
8.
Correction: Gene Expansion Shapes Genome Architecture in the Human Pathogen Lichtheimia corymbifera: An Evolutionary Genomics Analysis in the Ancient Terrestrial Mucorales (Mucoromycotina).
PLoS Genet
; 12(12): e1006491, 2016 Dec.
Article
in English
| MEDLINE | ID: mdl-27918580
9.
Smelling the difference: Transcriptome, proteome and volatilome changes after mating.
Fungal Genet Biol
; 112: 2-11, 2018 03.
Article
in English
| MEDLINE | ID: mdl-27593501
10.
LASSIM-A network inference toolbox for genome-wide mechanistic modeling.
PLoS Comput Biol
; 13(6): e1005608, 2017 Jun.
Article
in English
| MEDLINE | ID: mdl-28640810
11.
Candida albicans infection leads to barrier breakdown and a MAPK/NF-κB mediated stress response in the intestinal epithelial cell line C2BBe1.
Cell Microbiol
; 18(7): 889-904, 2016 07.
Article
in English
| MEDLINE | ID: mdl-26752615
12.
Defining the transcriptomic landscape of Candida glabrata by RNA-Seq.
Nucleic Acids Res
; 43(3): 1392-406, 2015 Feb 18.
Article
in English
| MEDLINE | ID: mdl-25586221
13.
Gene expansion shapes genome architecture in the human pathogen Lichtheimia corymbifera: an evolutionary genomics analysis in the ancient terrestrial mucorales (Mucoromycotina).
PLoS Genet
; 10(8): e1004496, 2014 Aug.
Article
in English
| MEDLINE | ID: mdl-25121733
14.
Microevolution of Candida albicans in macrophages restores filamentation in a nonfilamentous mutant.
PLoS Genet
; 10(12): e1004824, 2014 Dec.
Article
in English
| MEDLINE | ID: mdl-25474009
15.
FungiFun2: a comprehensive online resource for systematic analysis of gene lists from fungal species.
Bioinformatics
; 31(3): 445-6, 2015 Feb 01.
Article
in English
| MEDLINE | ID: mdl-25294921
16.
The novel globin protein fungoglobin is involved in low oxygen adaptation of Aspergillus fumigatus.
Mol Microbiol
; 93(3): 539-53, 2014 Aug.
Article
in English
| MEDLINE | ID: mdl-24948085
17.
Epidemiological Analysis on the Occurrence of Salmonella enterica Subspecies enterica Serovar Dublin in the German Federal State Schleswig-Holstein Using Whole-Genome Sequencing.
Microorganisms
; 11(1)2023 Jan 03.
Article
in English
| MEDLINE | ID: mdl-36677417
18.
Oxford nanopore technologies-a valuable tool to generate whole-genome sequencing data for in silico serotyping and the detection of genetic markers in Salmonella.
Front Vet Sci
; 10: 1178922, 2023.
Article
in English
| MEDLINE | ID: mdl-37323838
19.
Clonal relation between Salmonella enterica subspecies enterica serovar Dublin strains of bovine and food origin in Germany.
Front Vet Sci
; 10: 1081611, 2023.
Article
in English
| MEDLINE | ID: mdl-37303731
20.
Genomic insight into Campylobacter jejuni isolated from commercial turkey flocks in Germany using whole-genome sequencing analysis.
Front Vet Sci
; 10: 1092179, 2023.
Article
in English
| MEDLINE | ID: mdl-36875995