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1.
Eur Biophys J ; 48(7): 621-633, 2019 Oct.
Article in English | MEDLINE | ID: mdl-31324942

ABSTRACT

Antimicrobial peptides are a large group of natural compounds which present promising properties for the pharmaceutical and food industries, such as broad-spectrum activity, potential for use as natural preservatives, and reduced propensity for development of bacterial resistance. Plantaricin 149 (Pln149), isolated from Lactobacillus plantarum NRIC 149, is an intrinsically disordered peptide with the ability to inhibit bacteria from the Listeria and Staphylococcus genera, and which is capable of promoting inhibition and disruption of yeast cells. In this study, the interactions of Pln149 with model membranes composed of zwitterionic and/or anionic phospholipids were investigated using a range of biophysical techniques, including isothermal titration calorimetry, surface tension measurements, synchrotron radiation circular dichroism spectroscopy, oriented circular dichroism spectroscopy, and optical microscopy, to elucidate these peptides' mode of interactions and provide insight into their functional roles. In anionic model membranes, the binding of Pln149 to lipid bilayers is an endothermic process and induces a helical secondary structure in the peptide. The helices bind parallel to the surfaces of lipid bilayers and can promote vesicle disruption, depending on peptide concentration. Although Pln149 has relatively low affinity for zwitterionic liposomes, it is able to adsorb at their lipid interfaces, disturbing the lipid packing, assuming a similar parallel helix structure with a surface-bound orientation, and promoting an increase in the membrane surface area. Such findings can explain the intriguing inhibitory action of Pln149 in yeast cells whose cell membranes have a significant zwitterionic lipid composition.


Subject(s)
Bacteriocins/chemistry , Bacteriocins/metabolism , Cell Membrane/chemistry , Cell Membrane/metabolism , Adsorption , Lipid Bilayers/chemistry , Lipid Bilayers/metabolism , Protein Binding , Surface Tension , Unilamellar Liposomes/chemistry , Unilamellar Liposomes/metabolism
2.
Biochim Biophys Acta ; 1844(6): 1094-103, 2014 Jun.
Article in English | MEDLINE | ID: mdl-24637331

ABSTRACT

In eukaryotes, there are still steps of the vitamin B1 biosynthetic pathway not completely understood. In Arabidopsis thaliana, THI1 protein has been associated with the synthesis of the thiazole ring, a finding supported by the identification of a thiamine pyrophosphate (TPP)-like compound in its structure. Here, we investigated THI1 and its mutant THI1(A140V), responsible for the thiamin auxotrophy in a A. thaliana mutant line, aiming to clarify the impact of this mutation in the stability and activity of THI1. Recently, the THI1 orthologue (THI4) was revealed to be responsible for the donation of the sulfur atom from a cysteine residue to the thiazole ring in the thiamine intermediate. In this context, we carried out a cysteine quantification in THI1 and THI1(A140V) using electron spin resonance (ESR). These data showed that THI1(A140V) contains more sulfur-containing cysteines than THI1, indicating that the function as a sulfur donor is conserved, but the rate of donation reaction is somehow affected. Also, the bound compounds were isolated from both proteins and are present in different amounts in each protein. Unfolding studies presented differences in melting temperatures and also in the concentration of guanidine at which half of the protein unfolds, thus showing that THI1(A140V) has its conformational stability affected by the mutation. Hence, despite keeping its function in the early steps during the synthesis of TPP precursor, our studies have shown a decrease in the THI1(A140V) stability, which might be slowing down the biological activity of the mutant, and thus contributing to thiamin auxotrophy.


Subject(s)
Alanine/chemistry , Arabidopsis Proteins/chemistry , Arabidopsis/chemistry , Mutation , Thiamine/biosynthesis , Valine/chemistry , Alanine/metabolism , Arabidopsis/genetics , Arabidopsis/metabolism , Arabidopsis Proteins/genetics , Arabidopsis Proteins/metabolism , Cysteine/chemistry , Cysteine/metabolism , Electron Spin Resonance Spectroscopy , Escherichia coli/genetics , Escherichia coli/metabolism , Gene Expression , Isoenzymes/chemistry , Isoenzymes/genetics , Isoenzymes/metabolism , Kinetics , Protein Stability , Protein Unfolding , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Recombinant Proteins/metabolism , Thermodynamics , Thiamine Pyrophosphate/chemistry , Thiamine Pyrophosphate/metabolism , Valine/metabolism
3.
Biochim Biophys Acta ; 1838(12): 3145-52, 2014 Dec.
Article in English | MEDLINE | ID: mdl-25152299

ABSTRACT

Diacylglycerol acyltransferase 1 (DGAT1) is a microsomal membrane enzyme responsible for the final step in the synthesis of triacylglycerides. Although DGATs from a wide range of organisms have nearly identical sequences, there is little structural information available for these enzymes. The substrate binding sites of DGAT1 are predicted to be in its large luminal extramembranous loop and to include common motifs with acyl-CoA cholesterol acyltransferase enzymes and the diacylglycerol binding domain found in protein kinases. In this study, synthetic peptides corresponding to the predicted binding sites of DGAT1 enzyme were examined using synchrotron radiation circular dichroism spectroscopy, fluorescence emission and adsorption onto lipid monolayers to determine their interactions with substrates associated with triacylglyceride synthesis (oleoyl-CoA and dioleoylglycerol). One of the peptides, Sit1, which includes the FYxDWWN motif common to both DGAT1 and acyl-CoA cholesterol acyltransferase, changes its conformation in the presence of both substrates, suggesting its capability to bind their acyl chains. The other peptide (Sit2), which includes the putative diacylglycerol binding domain HKWCIRHFYKP found in protein kinase C and diacylglycerol kinases, appears to interact with the charged headgroup region of the substrates. Moreover, in an extended-peptide which contains Sit1 and Sit2 sequences separated by a flexible linker, larger conformational changes were induced by both substrates, suggesting that the two binding sites may bring the substrates into close proximity within the membrane, thus catalyzing the formation of the triacylglyceride product.

4.
Biochim Biophys Acta ; 1820(7): 1128-40, 2012 Jul.
Article in English | MEDLINE | ID: mdl-23077739

ABSTRACT

BACKGROUND: Peroxiredoxins have diverse functions in cellular defense-signaling pathways. 2-Cys-peroxiredoxins (2-Cys-Prx) reduce H2O2 and alkyl-hydroperoxide. This study describes the purification and characterization of a genuine 2-Cys-Prx from Vigna unguiculata (Vu-2-Cys-Prx). METHODS: Vu-2-Cys-Prx was purified from leaves by ammonium sulfate fractionation, chitin affinity and ion exchange chromatography. RESULTS: Vu-2-Cys-Prx reduces H2O2 using NADPH and DTT. Vu-2-Cys-Prx is a 44 kDa (SDS-PAGE)/46 kDa (exclusion chromatography) protein that appears as a 22 kDa molecule under reducing conditions, indicating that it is a homodimer linked intermolecularly by disulfide bonds and has a pI range of 4.56­4.72; its NH2-terminal sequence was similar to 2-Cys-Prx from Phaseolus vulgaris (96%) and Populus tricocarpa (96%). Analysis by ESI-Q-TOF MS/MS showed a molecular mass/pI of 28.622 kDa/5.18. Vu-2-Cys-Prx has 8% α-helix, 39% ß-sheet, 22% of turns and 31% of unordered forms. Vu-2-Cys-Prx was heat stable, has optimal activity at pH 7.0, and prevented plasmid DNA degradation. Atomic force microscopy shows that Vu-2-Cys-Prx oligomerized in decamers which might be associated with its molecular chaperone activity that prevented denaturation of insulin and citrate synthase. Its cDNA analysis showed that the redox-active Cys52 residue and the amino acids Pro45, Thr49 and Arg128 are conserved as in other 2-Cys-Prx. GENERAL SIGNIFICANCE: The biochemical and molecular features of Vu-2-Cys-Prx are similar to other members of 2-Cys-Prx family. To date, only one publication reported on the purification of native 2-Cys-Prx from leaves and the subsequent analysis by N-terminal Edman sequencing, which is crucial for construction of stromal recombinant 2-Cys-Prx proteins.


Subject(s)
Antioxidants/metabolism , Cysteine/chemistry , Fabaceae/metabolism , Molecular Chaperones/metabolism , Peroxiredoxins/isolation & purification , Peroxiredoxins/metabolism , Plant Leaves/metabolism , Amino Acid Sequence , Electrophoresis, Gel, Two-Dimensional , Electrophoresis, Polyacrylamide Gel , Fabaceae/growth & development , Hydrogen Peroxide/metabolism , Hydrogen-Ion Concentration , Microscopy, Atomic Force , Molecular Sequence Data , Oxidation-Reduction , Plant Leaves/growth & development , Sequence Homology, Amino Acid , Tandem Mass Spectrometry
5.
Biopolymers ; 100(2): 132-40, 2013 Apr.
Article in English | MEDLINE | ID: mdl-23616096

ABSTRACT

Recent results from our laboratory have previously shown the purification of a small serine proteinase inhibitor (PI), named CaTI1, from Capsicum annuum seeds. This work demonstrated the characterization of CaTI now named CaTI1, and the identification of two other small serine PIs, named CaTI2 and CaTI3, also present in these seeds. CaTI1 presented molecular mass of 6 kDa and pI value of ∼9.0. CaTI1 inhibited both trypsin and chymotrypsin with inhibition constants (Ki and Ki') of 14 and 2.8 nM for trypsin and 4.3 and 0.58 nM for chymotrypsin, respectively. Circular dichroism analysis suggested the predominance of both disordered and ß-strands regions in the secondary structure. CaTI1 presented striking physico-chemical stability. In an attempt to get the entire sequence of CaTI1 we found another PI called CaTI2. The discussion of this finding is in the main text. A degenerate primer was designed based on the sequence of trypsin inhibitor CaTI1 in an attempt to achieve the cloning of this PI. Surprisingly, the alignment of the predicted peptide derived from the cDNA with the protein database showed similarity with other C. annuun PIs, and thus it was called CaTI3.


Subject(s)
Capsicum , DNA, Complementary , Amino Acid Sequence , Cloning, Molecular , Molecular Sequence Data , Seeds/chemistry , Trypsin/metabolism , Trypsin Inhibitors/chemistry
6.
Int J Mol Sci ; 14(6): 12313-28, 2013 Jun 07.
Article in English | MEDLINE | ID: mdl-23749115

ABSTRACT

Plantaricin149a (Pln149a) is a cationic antimicrobial peptide, which was suggested to cause membrane destabilization via the carpet mechanism. The mode of action proposed to this antimicrobial peptide describes the induction of an amphipathic α-helix from Ala7 to Lys20, while the N-terminus residues remain in a coil conformation after binding. To better investigate this assumption, the purpose of this study was to determine the contributions of the Tyr1 in Pln149a in the binding to model membranes to promote its destabilization. The Tyr to Ser substitution increased the dissociation constant (KD) of the antimicrobial peptide from the liposomes (approximately three-fold higher), and decreased the enthalpy of binding to anionic vesicles from -17.2 kcal/mol to -10.2 kcal/mol. The peptide adsorption/incorporation into the negatively charged lipid vesicles was less effective with the Tyr1 substitution and peptide Pln149a perturbed the liposome integrity more than the analog, Pln149S. Taken together, the peptide-lipid interactions that govern the Pln149a antimicrobial activity are found not only in the amphipathic helix, but also in the N-terminus residues, which take part in enthalpic contributions due to the allocation at a lipid-aqueous interface.


Subject(s)
Bacteriocins/chemistry , Liposomes/chemistry , Phospholipids/chemistry , Tyrosine/metabolism , Amino Acid Sequence , Anti-Infective Agents/pharmacology , Calorimetry , Circular Dichroism , Hemolysis/drug effects , Humans , Microbial Sensitivity Tests , Molecular Sequence Data , Naphthalenes/metabolism , Peptides/chemical synthesis , Peptides/chemistry , Peptides/isolation & purification , Phosphatidylglycerols/chemistry , Pyridinium Compounds/metabolism , Spectrometry, Fluorescence , Structure-Activity Relationship , Tryptophan
7.
Biochim Biophys Acta ; 1798(8): 1547-55, 2010 Aug.
Article in English | MEDLINE | ID: mdl-20353752

ABSTRACT

Frutalin is a homotetrameric alpha-d-galactose (d-Gal)-binding lectin that activates natural killer cells in vitro and promotes leukocyte migration in vivo. Because lectins are potent lymphocyte stimulators, understanding the interactions that occur between them and cell surfaces can help to the action mechanisms involved in this process. In this paper, we present a detailed investigation of the interactions of frutalin with phospho- and glycolipids using Langmuir monolayers as biomembrane models. The results confirm the specificity of frutalin for d-Gal attached to a biomembrane. Adsorption of frutalin was more efficient for the galactose polar head lipids, in contrast to the one for sulfated galactose, in which a lag time is observed, indicating a rearrangement of the monolayer to incorporate the protein. Regarding ganglioside GM1 monolayers, lower quantities of the protein were adsorbed, probably due to the farther apart position of d-galactose from the interface. Binary mixtures containing galactocerebroside revealed small domains formed at high lipid packing in the presence of frutalin, suggesting that lectin induces the clusterization and the forming of domains in vitro, which may be a form of receptor internalization. This is the first experimental evidence of such lectin effect, and it may be useful to understand the mechanism of action of lectins at the molecular level.


Subject(s)
Plant Lectins/chemistry , Plant Lectins/metabolism , 1,2-Dipalmitoylphosphatidylcholine/chemistry , 1,2-Dipalmitoylphosphatidylcholine/metabolism , Adsorption , Artocarpus/chemistry , Binding Sites , Cell Line, Tumor , Cell Membrane/chemistry , Cell Membrane/metabolism , Elasticity , G(M1) Ganglioside/chemistry , G(M1) Ganglioside/metabolism , Galactose/metabolism , Humans , In Vitro Techniques , Membrane Fluidity , Membrane Lipids/chemistry , Membrane Lipids/metabolism , Membranes, Artificial , Models, Biological , Protein Binding
8.
Biochim Biophys Acta ; 1788(10): 2320-5, 2009 Oct.
Article in English | MEDLINE | ID: mdl-19664998

ABSTRACT

Diacylglycerol acyltransferase 1 (DGAT1) catalyzes the final and dedicated step in the synthesis of triacylglycerol, which is believed to involve the lipids oleoyl coenzyme A (OCoA) and dioleoyl-sn-glycerol (DOG) as substrates. In this work we investigated the interaction of a specific peptide, referred to as SIT2, on the C-terminal of DGAT1 (HKWCIRHFYKP) with model membranes made with OCoA and DOG in Langmuir monolayers and liposomes. According to the circular dichroism and fluorescence data, conformational changes on SIT2 were seen only on liposomes containing OCoA and DOG. In Langmuir monolayers, SIT2 causes the isotherms of neat OCoA and DOG monolayers to be expanded, but has negligible effect on mixed monolayers of OCoA and DOG. This synergistic interaction between SIT2 and DOG+OCoA may be rationalized in terms of a molecular model in which SIT2 may serve as a linkage between the two lipids. Our results therefore provide molecular-level evidence for the interaction between this domain and the substrates OCoA and DOG for the synthesis of triacylglycerol.


Subject(s)
Acyl Coenzyme A/metabolism , Diacylglycerol O-Acyltransferase/metabolism , Diglycerides/metabolism , Peptide Fragments/metabolism , Acyl Coenzyme A/chemistry , Animals , Cattle , Circular Dichroism , Diacylglycerol O-Acyltransferase/chemistry , Diglycerides/chemistry , Liposomes , Peptide Fragments/chemistry , Protein Conformation
9.
Biochim Biophys Acta ; 1788(10): 2252-8, 2009 Oct.
Article in English | MEDLINE | ID: mdl-19595988

ABSTRACT

The action of a synthetic antimicrobial peptide analog of Plantaricin 149 (Pln149a) against Saccharomyces cerevisiae and its interaction with biomembrane model systems were investigated. Pln149a was shown to inhibit S. cerevisiae growth by more than 80% in YPD medium, causing morphological changes in the yeast wall and remaining active and resistant to the yeast proteases even after 24 h of incubation. Different membrane model systems and carbohydrates were employed to better describe the Pln149a interaction with cellular components using circular dichroism and fluorescence spectroscopies, adsorption kinetics and surface elasticity in Langmuir monolayers. These assays showed that Pln149a does not interact with either mono/polysaccharides or zwitterionic LUVs, but is strongly adsorbed to and incorporated into negatively charged surfaces, causing a conformational change in its secondary structure from random-coil to helix upon adsorption. From the concurrent analysis of Pln149a adsorption kinetics and dilatational surface elasticity data, we determined that 2.5 muM is the critical concentration at which Pln149a will disrupt a negative DPPG monolayer. Furthermore, Pln149a exhibited a carpet-like mechanism of action, in which the peptide initially binds to the membrane, covering its surface and acquiring a helical structure that remains associated to the negatively charged phospholipids. After this electrostatic interaction, another peptide region causes a strain in the membrane, promoting its disruption.


Subject(s)
Bacteriocins/pharmacology , Cell Membrane/drug effects , Lipid Bilayers/metabolism , Phospholipids/metabolism , Saccharomyces cerevisiae/drug effects , Antimicrobial Cationic Peptides/pharmacology , Cell Membrane/metabolism , Liposomes/metabolism , Models, Biological , Saccharomyces cerevisiae/growth & development , Saccharomyces cerevisiae/metabolism , Surface Tension
10.
Eur Biophys J ; 39(8): 1193-205, 2010 Jul.
Article in English | MEDLINE | ID: mdl-20047048

ABSTRACT

Lectins have been classified into a structurally diverse group of proteins that bind carbohydrates and glycoconjugates with high specificity. They are extremely useful molecules in the characterization of saccharides, as drug delivery mediators, and even as cellular surface makers. In this study, we present camptosemin, a new lectin from Camptosema ellipticum. It was characterized as an N-acetyl-D-galactosamine-binding homo-tetrameric lectin, with a molecular weight around 26 kDa/monomers. The monomers were stable over a wide range of pH values and exhibited pH-dependent oligomerization. Camptosemin promoted adhesion of breast cancer cells and hemagglutination, and both activities were inhibited by its binding of sugar. The stability and unfolding/folding behavior of this lectin was characterized using fluorescence and far-UV circular dichroism spectroscopies. The results indicate that chemical unfolding of camptosemin proceeds as a two-state monomer-tetramer process. In addition, small-angle X-ray scattering shows that camptosemin behaves as a soluble and stable homo-tetramer molecule in solution.


Subject(s)
Fabaceae/chemistry , Plant Lectins/chemistry , Acetylgalactosamine/chemistry , Breast Neoplasms/chemistry , Carbohydrates/chemistry , Cell Adhesion , Cell Line, Tumor , Circular Dichroism , Female , Ferns , Hemagglutination , Humans , Hydrogen-Ion Concentration , Molecular Weight , Plant Lectins/genetics , Plant Lectins/isolation & purification , Protein Binding , Protein Conformation , Protein Multimerization , Protein Stability , Scattering, Small Angle , Sequence Homology, Amino Acid , Spectrometry, Fluorescence , Ultraviolet Rays , X-Ray Diffraction
11.
Exp Parasitol ; 122(2): 128-33, 2009 Jun.
Article in English | MEDLINE | ID: mdl-19217906

ABSTRACT

Two aspartyl proteases activities were identified and isolated from Trypanosoma cruzi epimastigotes: cruzipsin-I (CZP-I) and cruzipsin-II (CZP-II). One was isolated from a soluble fraction (CZP-II) and the other was solubilized with 3-[(3-cholamidopropyl)-dimethylammonio]-1-propanesulfonate (CZP-I). The molecular mass of both proteases was estimated to be 120 kDa by HPLC gel filtration and the activity of the enzymes was detected in a doublet of bands (56 and 48 kDa) by substrate-sodium dodecyl sulphate-polyacrylamide-gelatin gel electrophoresis. Substrate specificity studies indicated that the enzymes consistently hydrolyze the cathepsin D substrate Phe-Ala-Ala-Phe (4-NO2)-Phe-Val-Leu-O4MP but failed to hydrolyze serine and other protease substrates. Both proteases activities were strongly inhibited by the classic inhibitor pepstatin-A (> or =68%) and the aspartic active site labeling agent, 1,2-epoxy-3-(phenyl-nitrophenoxy) propane (> or =80%). These findings show that both proteases are novel T. cruzi acidic proteases. The physiological function of these enzymes in T. cruzi has under investigation.


Subject(s)
Aspartic Acid Endopeptidases/chemistry , Aspartic Acid Endopeptidases/isolation & purification , Trypanosoma cruzi/enzymology , Animals , Aspartic Acid Endopeptidases/antagonists & inhibitors , Aspartic Acid Endopeptidases/metabolism , Chromatography, High Pressure Liquid , Chromogenic Compounds/metabolism , Electrophoresis, Polyacrylamide Gel , Enzyme Inhibitors/pharmacology , Molecular Weight , Substrate Specificity
12.
Biochim Biophys Acta ; 1764(1): 146-52, 2006 Jan.
Article in English | MEDLINE | ID: mdl-16257591

ABSTRACT

Two novel chitin-binding lectins from seeds of Artocarpus genus were described in this paper, one from A. integrifolia (jackfruit) and one from A. incisa (breadfruit). They were purified from saline crude extract of seeds using affinity chromatography on chitin column, size-exclusion chromatography and reverse-phase chromatography on the C-18 column. Both are 14 kDa proteins, made up of 3 chains linked by disulfide bonds. The partial amino acid sequences of the two lectins showed they are homologous to each other but not to other plant chitin-binding proteins. Thus, they cannot be classified in any known plant chitin-binding protein family, particularly because of their inter-chain covalent bonds. Their circular dichroism spectra and deconvolution showed a secondary structure content of beta-sheet and unordered elements. The lectins were thermally stable until 80 degrees C and structural changes were observed below pH 6. Both lectins inhibited the growth of Fusarium moniliforme and Saccharomyces cerevisiae, and presented hemagglutination activity against human and rabbit erythrocytes. These lectins were denoted jackin (from jackfruit) and frutackin (from breadfruit).


Subject(s)
Antifungal Agents/chemistry , Artocarpus/chemistry , Plant Lectins/chemistry , Amino Acid Sequence , Animals , Antifungal Agents/pharmacology , Aspergillus niger/drug effects , Chitin/chemistry , Circular Dichroism , Fusarium/drug effects , Hemagglutination Tests , Humans , In Vitro Techniques , Molecular Sequence Data , Plant Lectins/pharmacology , Protein Binding , Protein Structure, Secondary , Rabbits , Sequence Homology, Amino Acid , Spectrometry, Fluorescence , Spectroscopy, Fourier Transform Infrared
13.
Phytochemistry ; 68(21): 2625-34, 2007 Nov.
Article in English | MEDLINE | ID: mdl-17651769

ABSTRACT

A trypsin inhibitor was purified from Calliandra selloi Macbride seeds (CSTI). SDS-PAGE under non-reducing conditions showed a single band of approximately 20,000 Da, while under reducing conditions two bands of 16,000 and 6000 Da were observed, indicating that CSTI consists of two polypeptide chains. Molecular masses of 20,078 and 20,279 were obtained by mass spectrometry, although only one pI of 4.0 was observed and one peak was obtained by reversed phase chromatography. Amino-terminal sequence analysis showed homology to Kunitz-type inhibitors. CSTI was able to inhibit trypsin (Ki 2.21 x 10(-7)M), alpha-chymotrypsin (Ki 4.95 x 10(-7)M) and kallikrein (Ki 4.20 x 10(-7)M) but had no effect on elastase. Trypsin inhibitory activity was stable over a wide range of pH and temperature. CSTI was particularly susceptible to DTT treatment, followed by addition of iodoacetamide. Far-UV circular dichroism measurements revealed that CSTI is a beta-II protein. Thermal unfolding showed a two-state transition with a midpoint at 68 degrees C. Far-UV CD spectra of CSTI at pH extremes showed little changes, while more pronounced differences in near-UV CD spectra were detected. Remarkably, treatment with 1mM DTT caused very slight changes in the far-UV CD spectrum, and only after carbamidomethylation was there was a marked loss observed in secondary structure.


Subject(s)
Fabaceae , Seeds/enzymology , Trypsin Inhibitors/chemistry , Trypsin Inhibitors/isolation & purification , Animals , Cells, Cultured , Erythrocytes/drug effects , Hot Temperature , Hydrogen-Ion Concentration , Molecular Weight , Rabbits , Spectrometry, Fluorescence , Trypsin Inhibitors/pharmacology
14.
Biochim Biophys Acta ; 1652(2): 107-14, 2003 Dec 01.
Article in English | MEDLINE | ID: mdl-14644046

ABSTRACT

Calflagin are flagellar calcium-binding proteins belonging to the EF-hand super family described in several protozoa, including Trypanosoma cruzi. Evidences have shown that Ca(2+) may play an important regulatory role in trypanosomatid flagellar mobility. In these parasites, the response of the cell to variations of Ca(2+) levels is determined by a variety of calcium-modulated proteins. Starting from T. cruzi cDNA lambdagt11 library trypomastigote, a clone encoding a 29-kDa flagellar protein designated recombinant calflagin (rC29) was selected. rC29 is a calcium-acyl switch protein modified by the addition of myristate and palmitate at its amino terminal segment. In this work, unmyristoylated rC29 was expressed in Escherichia coli as an intein fusion protein and purified by affinity chromatography. Circular dichroism (CD) and fluorescence measurements showed conformational changes of rC29 due to Ca(2+) binding. The Ca(2+) binding constants were obtained by tryptophan intrinsic fluorescence spectroscopy. Fluorescence titration exhibited two classes of Ca(2+)-binding sites in the unmyristoylated rC29, which bind calcium with apparent association constant of K(a) of 3.3+/-0.5 (10(6)) and 1.9+/-0.2 (10(4)) M(-1). Experiment using 8-anilinonaphthalene-1-sulfonic acid (ANS) as hydrophobic probe showed that the Ca(2+)-loaded form of rC29 contains exposed hydrophobic surfaces, thus suggesting that rC29 is probably functioning as a calcium sensor.


Subject(s)
Calcium-Binding Proteins/chemistry , Protozoan Proteins/chemistry , Recombinant Fusion Proteins/chemistry , Trypanosoma cruzi/chemistry , Amino Acid Sequence , Anilino Naphthalenesulfonates , Animals , Calcium/metabolism , Calcium-Binding Proteins/genetics , Calcium-Binding Proteins/metabolism , Circular Dichroism , Fluorescent Dyes , Molecular Sequence Data , Myristic Acid , Palmitic Acid/metabolism , Protozoan Proteins/genetics , Protozoan Proteins/metabolism , Recombinant Fusion Proteins/genetics , Recombinant Fusion Proteins/metabolism , Sequence Homology, Amino Acid , Spectrometry, Fluorescence , Tryptophan/chemistry
15.
FEBS J ; 272(5): 1201-10, 2005 Mar.
Article in English | MEDLINE | ID: mdl-15720394

ABSTRACT

Pulchellin is a type 2 ribosome-inactivating protein isolated from seeds of the Abrus pulchellus tenuiflorus plant. This study aims to obtain active and homogeneous protein for structural and biological studies that will clarify the functional aspects of this toxin. The DNA fragment encoding pulchellin A-chain was cloned and inserted into pGEX-5X to express the recombinant pulchellin A-chain (rPAC) as a fusion protein in Escherichia coli. The deduced amino acid sequence analyses of the rPAC presented a high sequential identity (> 86%) with the A-chain of abrin-c. The ability of the rPAC to depurinate rRNA in yeast ribosome was also demonstrated in vitro. In order to validate the toxic activity we promoted the in vitro association of the rPAC with the recombinant pulchellin binding chain (rPBC). Both chains were incubated in the presence of a reduced/oxidized system, yielding an active heterodimer (rPAB). The rPAB showed an apparent molecular mass of approximately 60 kDa, similar to the native pulchellin. The toxic activities of the rPAB and native pulchellin were compared by intraperitoneal injection of different dilutions into mice. The rPAB was able to kill 50% of the tested mice with doses of 45 microg x kg(-1). Our results indicated that the heterodimer showed toxic activity and a conformational pattern similar to pulchellin. In addition, rPAC produced in this heterologous system might be useful for the preparation of immunoconjugates with potential as a therapeutic agent.


Subject(s)
Abrus/genetics , Plant Proteins/metabolism , Protein Subunits/metabolism , Recombinant Fusion Proteins/metabolism , Ribosomes/metabolism , Abrus/chemistry , Amino Acid Sequence , Animals , Circular Dichroism , Cloning, Molecular , DNA, Complementary/genetics , DNA, Complementary/isolation & purification , DNA, Plant/genetics , DNA, Plant/metabolism , Injections, Intraperitoneal , Mice , Molecular Sequence Data , N-Glycosyl Hydrolases/metabolism , Plant Proteins/chemistry , Plant Proteins/toxicity , Protein Conformation , Protein Subunits/chemistry , Protein Subunits/toxicity , RNA, Fungal/genetics , RNA, Fungal/metabolism , RNA, Plant/genetics , RNA, Plant/metabolism , RNA, Ribosomal/genetics , RNA, Ribosomal/metabolism , Recombinant Fusion Proteins/chemistry , Recombinant Fusion Proteins/toxicity , Saccharomyces cerevisiae/metabolism , Seeds/chemistry , Sequence Homology, Amino Acid
16.
Peptides ; 26(2): 243-9, 2005 Feb.
Article in English | MEDLINE | ID: mdl-15629535

ABSTRACT

Proteins from the inner core of HIV-1, such as the capsid protein (p24), are involved in crucial processes during the virus life cycle. The p24 protein plays an active structural role in the Gag protein and in its mature form. This work describes the production of a peptide derived from the p24 C-terminal, TLRAEQASQEVKNWMTETLLVQNA, using recombinant technology. This region (p24-3) is involved in interfaces during the p24 dimerization, which occurs during capsid assembly. The p24-3 sequence was obtained by a synthetic gene strategy and inserted into the pET 32a expression vector to produce soluble fusion protein in Escherichia coli BL21(DE3). This strategy leads to an incorporation of three amino acid residues (AMA) in the N-terminal of the native sequence to form the recombinant p24-3 (rp24-3). The rp24-3 was purified by reverse phase chromatography to homogeneity, as inferred by mass spectrometry and protein sequence analysis. Structural studies using circular dichroism and steady-state fluorescence showed that the rp24-3 is structured by helical and beta elements. As a function of its hydrophobic character it can self-associate forming oligomers. We present in this paper the first development of a suitable expression system for rp24-3, which provides high amounts of the peptide. This strategy will allow the development of new antiviral (HIV) agents.


Subject(s)
HIV Core Protein p24/chemistry , Hydrophobic and Hydrophilic Interactions , Peptides/chemistry , Peptides/metabolism , Circular Dichroism , Escherichia coli/genetics , Genetic Vectors , Mass Spectrometry , Peptides/genetics , Protein Structure, Secondary , Recombinant Fusion Proteins/chemistry , Recombinant Fusion Proteins/metabolism , Sequence Analysis, Protein , Solubility , Spectrometry, Fluorescence
17.
Biophys Chem ; 113(2): 175-82, 2005 Feb 01.
Article in English | MEDLINE | ID: mdl-15617825

ABSTRACT

We studied the interaction of the peptide AAMQMLKETINEEAAEWDRVHPVHAGPIA from the HIV-1 p24 protein in the presence of SDS (anionic) and CTABr (cationic) micelles at pH 7.0 by circular dichroism, fluorescence, and electron spin resonance (ESR). The micelles induced secondary structure as well as a blue shift in the tryptophan fluorescence emission, indicating an interaction between the peptide and the micelles. However, different contents of secondary structure elements were found when the peptide interacts with SDS or CTABr micelles. Steady-state anisotropy indicates a constraint on the rotational mobility of the tryptophan residue of the peptide upon interaction with micelles. ESR studies pointed to different locations for the peptide in either micelle. Our results suggested that at least part of the peptide might be located at the hydrophobic core of the CTABr micelles, probably at the C-terminal region, while it is more inserted into the SDS micelles.


Subject(s)
HIV Core Protein p24/chemistry , Ions/chemistry , Peptides/chemistry , Protein Conformation , Protein Structure, Secondary , Amino Acid Sequence , Binding Sites , Cetrimonium , Cetrimonium Compounds/chemistry , Circular Dichroism , Electron Spin Resonance Spectroscopy , Fluorescence , Micelles , Molecular Sequence Data , Peptides/chemical synthesis , Sodium Dodecyl Sulfate/chemistry , Tryptophan/chemistry
18.
Colloids Surf B Biointerfaces ; 41(1): 15-20, 2005 Mar 10.
Article in English | MEDLINE | ID: mdl-15698751

ABSTRACT

The study of interactions between biological molecules and model membranes is essential for the understanding of a number of physiological mechanisms involved in viral infections and dissemination. In this paper, the analysis of the interaction between a peptide from the p24 protein of Human Immunodeficiency Virus type 1 (HIV-1) and a phospholipid monolayer has pointed to a cooperative response in which very small amounts of peptide p24-1 (e.g. 0.05 mol%) can lead to measurable effects. Monolayer surface pressure and surface potential isotherms were affected for peptide concentrations as low as 0.05 mol%, with saturation at 0.5 mol%. The expansion effect from p24-1 is confirmed by changes in morphology of the monolayers using Brewster angle microscopy. Even though p24-1 is disordered in aqueous solutions, the interaction with dipalmitoyl phosphatidylcholine (DPPC) causes it to adopt an alpha-helix structure, as shown by circular dichroism (CD) data for multilamellar vesicles (MLV). The expansion of the phospholipid monolayer in a cooperative way may imply that p24-1 has potential antiviral activity, by participating in the cell rupture, with no need of specific receptors in the membrane.


Subject(s)
1,2-Dipalmitoylphosphatidylcholine/chemistry , HIV Core Protein p24/chemistry , HIV-1/chemistry , Peptides/chemistry , Phosphatidylglycerols/chemistry , 1,2-Dipalmitoylphosphatidylcholine/metabolism , Amino Acid Sequence , Circular Dichroism , HIV Core Protein p24/metabolism , Humans , Molecular Sequence Data , Phosphatidylglycerols/metabolism , Protein Structure, Secondary
19.
PLoS One ; 10(2): e0118407, 2015.
Article in English | MEDLINE | ID: mdl-25719207

ABSTRACT

Diacylglycerol acyltransferase 1 (DGAT1) is a key enzyme in the triacylglyceride synthesis pathway. Bovine DGAT1 is an endoplasmic reticulum membrane-bound protein associated with the regulation of fat content in milk and meat. The aim of this study was to evaluate the interaction of DGAT1 peptides corresponding to putative substrate binding sites with different types of model membranes. Whilst these peptides are predicted to be located in an extramembranous loop of the membrane-bound protein, their hydrophobic substrates are membrane-bound molecules. In this study, peptides corresponding to the binding sites of the two substrates involved in the reaction were examined in the presence of model membranes in order to probe potential interactions between them that might influence the subsequent binding of the substrates. Whilst the conformation of one of the peptides changed upon binding several types of micelles regardless of their surface charge, suggesting binding to hydrophobic domains, the other peptide bound strongly to negatively-charged model membranes. This binding was accompanied by a change in conformation, and produced leakage of the liposome-entrapped dye calcein. The different hydrophobic and electrostatic interactions observed suggest the peptides may be involved in the interactions of the enzyme with membrane surfaces, facilitating access of the catalytic histidine to the triacylglycerol substrates.


Subject(s)
Diacylglycerol O-Acyltransferase/chemistry , Unilamellar Liposomes/chemistry , Binding Sites , Diacylglycerol O-Acyltransferase/metabolism , Hydrophobic and Hydrophilic Interactions , Protein Binding , Static Electricity , Unilamellar Liposomes/metabolism
20.
Phytochemistry ; 61(3): 301-10, 2002 Oct.
Article in English | MEDLINE | ID: mdl-12359516

ABSTRACT

A lectin was purified from the cotyledons of Luetzelburgia auriculata (Fr. All) Ducke by affinity chromatography on agarose-N-acetyl-D-galactosamine. The lectin is a potent agglutinin for rabbit erythrocytes, reacts with human red cells, but is inactive against cow, sheep, and goat erythrocytes. Hemagglutination of rabbit erythrocytes was inhibited by either 0.39 mM N-acetyl-neuraminic acid or N-acetyl-D-galactosamin, 12.5 mM D-lactose or D-melibiose, 50 mM D-galactose or raffinose. Its hemagglutinating activity was lost at 80 degrees C, 5 min, and the activation energy required for denaturation was 104.75 kJ mol(-1). Chromatography on Sephadex G-100, at pH 7.6, showed that at this hydrogenic ionic concentration the native lectin was a homotetramer (123.5 kDa). By denaturing SDS-PAGE, LAA seemed to be composed of a mixture of 29 and 15 kDa polypeptide subunits. At acidic and basic pHs it assumed different conformations, as demonstrated by exclusion chromatography on Superdex 200 HR 10/30. The N-terminal sequence of the 29 kDa band was SEVVSFSFTKFNPNQKDII and the 15 kDa band contained a mixture of SEVVSFSFTKFNPNQKDII and KFNQIVAVEEDTDXESQPQ sequences, indicating that these bands may represent full-length and its endogenous fragments, respectively. The lectin is a glycoprotein having 3.2% neutral carbohydrate, with a pI of 5.8, containing high levels of Asp+Asn and Glu+Gln and hydroxy amino acids, and low amount or absence of sulfur amino acids. Its absorption spectrum showed a maximum at 280 nm and a epsilon (1%) x (1cm) of 5.2. Its CD spectrum was characterized by minima near 228 nm, maxima near 196 nm and a negative to positive crossover at 210 nm. The secondary structure content was 6% alpha-helix, 8% parallel beta-sheet, 38% antiparallel beta-sheet, 17% beta-turn, 31% unordered and others contribution, and 1% RMS (root mean square). In the fluorescence spectroscopy, excitation of the lectin solution at 280 nm gave an emission spectrum in the 285-445 nm range. The wavelength maximum emission was in 334.5 nm, typical for tryptophan residues buried inside the protein.


Subject(s)
Fabaceae/chemistry , Lectins/chemistry , Lectins/isolation & purification , Amino Acid Sequence , Amino Acids/analysis , Carbohydrates/analysis , Chromatography, Ion Exchange , Circular Dichroism , Electrophoresis, Polyacrylamide Gel , Hemagglutination , Hot Temperature , Hydrogen-Ion Concentration , Isoelectric Focusing , Lectins/metabolism , Molecular Sequence Data , Molecular Weight , Sequence Analysis, Protein
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