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1.
Pulm Pharmacol Ther ; 70: 102060, 2021 10.
Article in English | MEDLINE | ID: mdl-34303823

ABSTRACT

Mepolizumab and Benralizumab are biological drugs for severe asthma patients able to reduce moderate-to-severe exacerbation rate (peripheral eosinophilial % mepolizumab 1.6 ± 1.2; benralizumab 0; p < 0.0001), improving the quality of life and lung function parameters (FEV1%: mepolizumab 87.1 ± 21.5; benralizumab 89.7 ± 15, p < 0.04). Here we report a preliminary redox proteomic study highlighting the level of oxidative burst present in serum from patients before and after one month of both treatments. Our results highlighted apolipoprotein A1 oxidation after Mepolizumab treatment, that could be related to HDL functionality and could represent a potential biomarker for the treatment. On the other hand, after one month of Benralizumab we detected higher oxidation levels of ceruloplasmin and transthyretin, considered an important oxidative stress biomarker which action help to maintain redox homeostasis.


Subject(s)
Anti-Asthmatic Agents , Asthma , Anti-Asthmatic Agents/therapeutic use , Antibodies, Monoclonal, Humanized , Asthma/drug therapy , Humans , Oxidation-Reduction , Proteomics , Quality of Life
2.
Ecotoxicol Environ Saf ; 160: 144-153, 2018 Sep 30.
Article in English | MEDLINE | ID: mdl-29803189

ABSTRACT

One of the crucial and unsolved problems of the airborne carbon nanoparticles is the role played by the adsorbed environmental pollutants on their toxicological effect. Indeed, in the urban areas, the carbon nanoparticles usually adsorb some atmospheric contaminants, whose one of the leading representatives is the benzo(α)pyrene. Herein, we used the proteomics to investigate the alteration of toxicological pathways due to the carbon nanopowder-benzo(α)pyrene complex in comparison with the two contaminants administered alone on human skin-derived fibroblasts (hSDFs) exposed for 8 days in semi-static conditions. The preliminary confocal microscopy observations highlighted that carbon-nanopowder was able to pass through the cell membranes and accumulate into the cytoplasm both when administered alone and with the adsorbed benzo(α)pyrene. Proteomics revealed that the effect of carbon nanopowder-benzo(α)pyrene complex seems to be related to a new toxicological behavior instead of simple additive or synergistic effects. In detail, the cellular pathways modulated by the complex were mainly related to energy shift (glycolysis and pentose phosphate pathway), apoptosis, stress response and cellular trafficking.


Subject(s)
Benzo(a)pyrene/toxicity , Carbon/toxicity , Environmental Pollutants/toxicity , Fibroblasts/drug effects , Nanoparticles/toxicity , Adsorption , Benzo(a)pyrene/chemistry , Carbon/chemistry , Cell Membrane/metabolism , Cells, Cultured , Environmental Pollutants/chemistry , Humans , Nanoparticles/chemistry , Proteomics , Skin/cytology
3.
J Evol Biol ; 28(7): 1410-6, 2015 Jul.
Article in English | MEDLINE | ID: mdl-26012357

ABSTRACT

Despite the long-standing interest in nonstationarity of both phenotypic evolution and diversification rates, only recently have methods been developed to study this property. Here, we propose a methodological expansion of the phylogenetic signal-representation (PSR) curve based on phylogenetic eigenvectors to test for nonstationarity. The PSR curve is built by plotting the coefficients of determination R(2) from phylogenetic eigenvector regression (PVR) models increasing the number of phylogenetic eigenvectors against the accumulated eigenvalues. The PSR curve is linear under a stationary model of trait evolution (i.e. the Brownian motion model). Here we describe the distribution of shifts in the models R(2) and used a randomization procedure to compare observed and simulated shifts along the PSR curve, which allowed detecting nonstationarity in trait evolution. As an applied example, we show that the main evolutionary pattern of variation in the theropod dinosaur skull was nonstationary, with a significant shift in evolutionary rates in derived oviraptorosaurs, an aberrant group of mostly toothless, crested, birdlike theropods. This result is also supported by a recently proposed Bayesian-based method (AUTEUR). A significant deviation between Ceratosaurus and Limusaurus terminal branches was also detected. We purport that our new approach is a valuable tool for evolutionary biologists, owing to its simplicity, flexibility and comprehensiveness.


Subject(s)
Biological Evolution , Phylogeny , Skull/anatomy & histology , Animals , Bayes Theorem , Dinosaurs , Regression Analysis
4.
Ann Bot ; 108(3): 521-7, 2011 Sep.
Article in English | MEDLINE | ID: mdl-21813563

ABSTRACT

BACKGROUND AND AIMS: Nectar is a very complex mixture of substances. Some components (sugars and amino acids) are considered primary alimentary rewards for animals and have been investigated and characterized in numerous species for many years. In contrast, nectar proteins have been the subject of few studies and little is known of their function. Only very recently have detailed studies and characterization of nectar proteins been undertaken, and then for only a very few species. This current work represents a first step in the identification of a protein profile for the floral nectar of Cucurbita pepo. In this regard, the species studied is of particular interest in that it is monoecious with unisexual flowers and, consequently, it is possible that nectar proteins derived from male and female flowers may differ. METHODS: Manually excised spots from two-dimensional (2-D) electrophoresis were subjected to in-gel protein digestion. The resulting peptides were sequenced using nanoscale LC-ESI/MS-MS (liquid chromatography-electrospray ionization/tandem mass spectrometry). An MS/MS ions search was carried out in Swiss-Prot and NCBInr databases using MASCOT software. KEY RESULTS: Two-dimensional electrophoresis revealed a total of 24 spots and a different protein profile for male and female flower nectar. Four main proteins recognized by 2-D electrophoresis most closely resemble ß-d-xylosidases from Arabidopsis thaliana and have some homology to a ß-d-xylosidase from Medicago varia. They were present in similar quantities in male and female flowers and had the same molecular weight, but with slightly different isoelectric points. CONCLUSIONS: A putative function for xylosidases in floral nectar of C. pepo is proposed, namely that they may be involved in degrading the oligosaccharides released by the nectary cell walls in response to hydrolytic enzymes produced by invading micro-organisms. Several types of oligosaccharides have been reported to increase the pathogenic potential of micro-organisms. Thus, it is possible that such a mechanism may reduce the virulence of pathogens present in nectar.


Subject(s)
Cucurbita/enzymology , Plant Nectar/metabolism , Xylans/metabolism , Xylosidases/metabolism
5.
Inflammation ; 31(5): 351-4, 2008 Oct.
Article in English | MEDLINE | ID: mdl-18784990

ABSTRACT

Calgranulins are small calcium-binding proteins with several immunological functions involved in inflammatory processes. Calgranulin A is reported to be mainly associated with acute inflammation while calgranulin B seems to play a role in chronic inflammatory disorders. In this study we used a proteomic approach to analyse calgranulin B expression in bronchoalveolar lavage (BAL) from a group of patients with different interstitial lung diseases. Two dimensional electrophoresis analysis of BAL was performed in 11 idiopathic pulmonary fibrosis patients, nine sarcoidosis patients, 11 with systemic sclerosis patients and five healthy controls. Significantly higher (p<0.001) calgranulin B percentage volumes were observed in BAL from IPF patients than controls and other ILD patients. This result sustains the hypothesis that calgranulin B could be involved in chronic lung diseases, probably through increased expression and enhanced activation of alveolar polymorphonuclear cells related to idiopathic pulmonary fibrosis. Quantitative analysis by an easier method applied to a larger population will be necessary to determine whether calgranulin B could be a good marker of disease severity.


Subject(s)
Bronchoalveolar Lavage Fluid/chemistry , Calgranulin B/metabolism , Lung Diseases, Interstitial/metabolism , Sarcoidosis/metabolism , Scleroderma, Systemic/metabolism , Adult , Aged , Female , Fibrosis , Humans , Immune System , Inflammation , Male , Middle Aged , Models, Biological
6.
Braz J Biol ; 68(2): 233-40, 2008 May.
Article in English | MEDLINE | ID: mdl-18660950

ABSTRACT

Spatial autocorrelation is the lack of independence between pairs of observations at given distances within a geographical space, a phenomenon commonly found in ecological data. Taking into account spatial autocorrelation when evaluating problems in geographical ecology, including gradients in species richness, is important to describe both the spatial structure in data and to correct the bias in Type I errors of standard statistical analyses. However, to effectively solve these problems it is necessary to establish the best way to incorporate the spatial structure to be used in the models. In this paper, we applied autoregressive models based on different types of connections and distances between 181 cells covering the Cerrado region of Central Brazil to study the spatial variation in mammal and bird species richness across the biome. Spatial structure was stronger for birds than for mammals, with R(2) values ranging from 0.77 to 0.94 for mammals and from 0.77 to 0.97 for birds, for models based on different definitions of spatial structures. According to the Akaike Information Criterion (AIC), the best autoregressive model was obtained by using the rook connection. In general, these results furnish guidelines for future modelling of species richness patterns in relation to environmental predictors and other variables expressing human occupation in the biome.


Subject(s)
Biodiversity , Geography , Models, Biological , Trees , Animals , Birds , Brazil , Mammals , Population Density
7.
Clin Ter ; 158(2): 165-72, 2007.
Article in Italian | MEDLINE | ID: mdl-17566520

ABSTRACT

Gastroesophageal reflux disease (GERD) can be defined as a condition resulting from the reflux of stomach contents into the esophagus. Its pharmacological treatment is aimed at symptom relief, healing of erosions and ulcerations and prevention of relapses. Based on the pathophysiology, the ideal treatment is directed to enhance basal sphincter pressure or decrease the frequency of TLESR, restore esophageal "clearance", accelerate gastric emptying and highten mucosal resistance as well as reduce or inhibit gastric acid secretion. Most of these targets are currently achievable because the availability of different types of drugs, however the "ideal" pharmacologic treatment of GERD does not exist. Current remedies for GERD include life style changes along with a wide array of antisecretory drugs, such as antacids, H2-antagonists and proton pump inhibitors (PPI). Surgery, based on anti-reflux procedures, and endoscopic approaches may have a role in the management of patients with GERD.


Subject(s)
Gastroesophageal Reflux/therapy , Gastroesophageal Reflux/drug therapy , Gastroesophageal Reflux/surgery , Humans
8.
Clin Ter ; 158(1): 77-83, 2007.
Article in Italian | MEDLINE | ID: mdl-17405661

ABSTRACT

Gastroesophageal reflux disease (GERD) can be described as a clinical picture resulting from the reflux of stomach contents into the esophagus. The actual prevalence of GERD remains unestablished, although this disorder is generally common in old patients, male sex and in subsets of patients with pulmonary manifestations such as asthma. From a pathophysiological stand-point, GERD is thought to have a multifactorial etiology which involves genetics, anatomical, functional, environmental, hormonal and pharmacological factors. GERD has different clinical presentations which may be divided in three main classes: typical symptoms (heartburn and regurgitation); atypical or extraesophageal symptoms (angina-like chest pain, asthma, chronic cough and laryngitis); and complications (ulcers, strictures and Barrett's esophagus). In GERD diagnosis a key role is played by: accurate symptom evaluation, response to proton pump inhibitors and, finally, at least one in a life-time endoscopy. Moreover, barium swallow X-ray, 24-h esophageal pH monitoring and gastro-esophageal manometry can be useful to support diagnosis in some unusual cases or in cases partially or unresponsive to standard pharmacologic treatment.


Subject(s)
Gastroesophageal Reflux , Adult , Aged , Barium Sulfate , Barrett Esophagus/diagnosis , Barrett Esophagus/etiology , Contrast Media , Endoscopy , Esophageal pH Monitoring , Esophagitis, Peptic/diagnosis , Female , Gastroesophageal Reflux/complications , Gastroesophageal Reflux/diagnosis , Gastroesophageal Reflux/diagnostic imaging , Gastroesophageal Reflux/drug therapy , Gastroesophageal Reflux/epidemiology , Gastroesophageal Reflux/etiology , Gastroesophageal Reflux/physiopathology , Heartburn/etiology , Hernia, Hiatal/diagnosis , Humans , Male , Manometry , Middle Aged , Prevalence , Proton Pump Inhibitors , Radiography , Risk Factors
9.
Nanotoxicology ; 11(3): 371-381, 2017 04.
Article in English | MEDLINE | ID: mdl-28285553

ABSTRACT

Carbon-based nanoparticles (CBNs) are largely distributed worldwide due to fossil fuel combustion and their presence in many consumer products. In addition to their proven toxicological effects in several biological models, attention in recent years has focussed on the role played by CBNs as Trojan-horse carriers for adsorbed environmental pollutants. This role has not been conclusively determined to date because CBNs can decrease the bioavailability of contaminants or represent an additional source of intake. Herein, we evaluated the intake, transport and distribution of one of the carbon-based powders, the so-called carbon nanopowder (CNPW), and benzo(α)pyrene, when administered alone and in co-exposure to Danio rerio embryos. Data obtained by means of advanced microscopic techniques illustrated that the "particle-specific" effect induced a modification in the accumulation of benzo(α)pyrene, which is forced to follow the distribution of the physical pollutant instead of its natural bioaccumulation. The combined results from functional proteomics and gene transcription analysis highlighted the different biochemical pathways involved in the action of the two different contaminants administered alone and when bound together. In particular, we observed a clear change in several proteins involved in the homeostatic response to hypoxia only after exposure to the CNPW or co-exposure to the mixture, whereas exposure to benzo(α)pyrene alone mainly modified structural proteins. The entire dataset suggested a Trojan-horse mechanism involved in the biological impacts on Danio rerio embryos especially due to different bioaccumulation pathways and cellular targets.


Subject(s)
Benzo(a)pyrene/pharmacokinetics , Carbon/pharmacokinetics , Environmental Pollutants/pharmacokinetics , Nanoparticles/metabolism , Animals , Benzo(a)pyrene/toxicity , Carbon/toxicity , Environmental Pollutants/toxicity , Nanoparticles/toxicity , Zebrafish/embryology
10.
Dig Liver Dis ; 38(12): 879-84, 2006 Dec.
Article in English | MEDLINE | ID: mdl-16824811

ABSTRACT

BACKGROUND: Interstitial lung disease is a heterogeneous entity, which encompasses a large number of pulmonary disorders, including idiopathic pulmonary fibrosis. Gastro-oesophageal reflux appears to be more prevalent in idiopathic pulmonary fibrosis than in controls and in patients with secondary pulmonary fibrosis, but its contribution to interstitial lung disease remains unsettled. AIMS: To prospectively evaluate gastro-oesophageal reflux in patients with interstitial lung disease and to define acid reflux patterns in patients with idiopathic and secondary forms of pulmonary fibrosis. MATERIALS AND METHODS: Twenty-eight patients (15M, median age 66 years, interquartile range 60-71) were studied by history taking, pulmonary function tests, high resolution computed tomography, oesophageal manometry and 24h oesophago-gastric pH monitoring. RESULTS: Sixteen patients (57%) had typical reflux symptoms. All patients completed 24h pH metry and 14 underwent oesophageal manometry. An abnormal oesophageal acid exposure was observed in 19 patients (68%), 13 of which complained of predominant typical reflux symptoms. A diagnosis of idiopathic pulmonary fibrosis was made in 18 patients, while the remaining 10 patients were classified as secondary pulmonary fibrosis. Secondary pulmonary fibrosis patients had more restrictive lung defect, as expressed as Tiffeneau index (p<0.05) and greater acid reflux at nighttime (p<0.05) than idiopathic pulmonary fibrosis patients. CONCLUSIONS: The prevalence of abnormal acid reflux in interstitial lung disease patients is high and, in particular, patients with secondary pulmonary fibrosis show higher oesophageal acid exposure than those with idiopathic form.


Subject(s)
Gastroesophageal Reflux/complications , Gastroesophageal Reflux/diagnosis , Lung Diseases, Interstitial/complications , Aged , Esophageal pH Monitoring , Female , Gastroesophageal Reflux/epidemiology , Humans , Male , Manometry , Middle Aged , Prevalence , Respiratory Function Tests
11.
Braz J Biol ; 66(2B): 611-22, 2006 May.
Article in English | MEDLINE | ID: mdl-16906293

ABSTRACT

The influence of environmental factors on the distribution of Ephemeroptera, Plecoptera and Trichoptera (EPT) immatures was investigated in streams of the Brazilian Center-West (Serra do Pireneus, Pirenópolis, State of Goiás). The insects were sampled by lifting the stones in front of a sieve (0.5 mm mesh) and then removing the insects from both the stone and the sieve. Sampling was carried out for 1 h at 5 collection sites over a period of 14 months. Air and water temperature (degrees C), water velocity (m/s), discharge (m(3)/s), electric conductivity (microS/cm), pH, and rainfall (mm) were also recorded. In general, we may state that altitude, hydrologic classification (order) and vegetation cover were the most important factors explaining the distribution of Ephemeroptera, Plecoptera and Trichoptera immatures. The influence of the rainfall on the temporal variation of the abundance of insects was stronger in stream segments of medium order (3rd, 4th order) compared to smaller streams (first order).


Subject(s)
Ecosystem , Insecta/classification , Animals , Brazil , Population Density , Population Dynamics , Rivers , Seasons
12.
J Breath Res ; 10(2): 026007, 2016 Apr 15.
Article in English | MEDLINE | ID: mdl-27082636

ABSTRACT

Idiopathic pulmonary fibrosis (IPF) is a chronic lung disease characterized by progressive deterioration of the alveolar integrity. Among IPF identified phenotypes, that of familial (f-)IPF is usually associated with several gene mutations which are seldom observed in sporadic (s-)IPF. This study aimed at investigating the molecular patterns and variability in f-IPF and s-IPF patients through a differential proteomic analysis. Protein patterns of bronchoalveolar lavage fluid (BALF) samples from 10 familial and 17 sporadic IPF patients were compared using 2D electrophoresis and mass spectrometry. Principal component analysis (PCA) was applied to proteomic data and an enrichment analysis was also performed to characterize specific pathogenic mechanisms and to identify potential biomarkers. BALF samples from f-IPF showed 87 protein spots differentially expressed than those from s-IPF samples; once identified, these spots revealed 22 unique proteins. The functional analysis showed that the endothelial reticulum stress probably plays a central pathogenetic role in f-IPF with an up-regulation of proteins involved in wounding and immune responses, coagulation system, and ion homeostasis. Up-regulated proteins in the s-IPF group were those involved in the oxidative stress response. PCA analysis of differentially expressed proteins clearly distinguished f-IPF from s-IPF patients, and in agreement with radiological and histological patterns, pointed out a higher heterogeneity in f-IPF than s-IPF samples. The 'Slit/Robo signaling', 'clathrin-coated vesicle' and 'cytoskeleton remodelling', were extrapolated by 'pathways analysis' and the results of 'diseases (by biomarkers)' highlighted a 'connective tissue and autoimmune disease', two aspects of increasing interest in IPF.


Subject(s)
Bronchoalveolar Lavage Fluid , Idiopathic Pulmonary Fibrosis/metabolism , Oxidative Stress/physiology , Proteomics , Biomarkers/analysis , Bronchoalveolar Lavage , Female , Humans , Male , Middle Aged , Oxidation-Reduction
13.
Sci Rep ; 6: 21540, 2016 Feb 15.
Article in English | MEDLINE | ID: mdl-26876635

ABSTRACT

Over the last years the zebrafish imposed itself as a powerful model to study skeletal diseases, but a limit to its use is the poor characterization of collagen type I, the most abundant protein in bone and skin. In tetrapods collagen type I is a trimer mainly composed of two α1 chains and one α2 chain, encoded by COL1A1 and COL1A2 genes, respectively. In contrast, in zebrafish three type I collagen genes exist, col1a1a, col1a1b and col1a2 coding for α1(I), α3(I) and α2(I) chains. During embryonic and larval development the three collagen type I genes showed a similar spatio-temporal expression pattern, indicating their co-regulation and interdependence at these stages. In both embryonic and adult tissues, the presence of the three α(I) chains was demonstrated, although in embryos α1(I) was present in two distinct glycosylated states, suggesting a developmental-specific collagen composition. Even though in adult bone, skin and scales equal amounts of α1(I), α3(I) and α2(I) chains are present, the presented data suggest a tissue-specific stoichiometry and/or post-translational modification status for collagen type I. In conclusion, this data will be useful to properly interpret results and insights gained from zebrafish models of skeletal diseases.


Subject(s)
Bone Development/genetics , Collagen Type I/genetics , Collagen/genetics , Zebrafish Proteins/genetics , Zebrafish/genetics , Amino Acid Sequence , Animals , Collagen/biosynthesis , Collagen Type I/biosynthesis , Gene Expression Regulation, Developmental , Protein Processing, Post-Translational , Skin/growth & development , Skin/metabolism , Zebrafish/growth & development , Zebrafish Proteins/biosynthesis
14.
Cell Death Differ ; 11(8): 842-52, 2004 Aug.
Article in English | MEDLINE | ID: mdl-15088069

ABSTRACT

We previously reported that photodynamic therapy (PDT) using Purpurin-18 (Pu-18) induces apoptosis in HL60 cells. Using flow cytometry, two-dimensional electrophoresis coupled with immunodetection of carbonylated proteins and mass spectrometry, we now show that PDT-induced apoptosis is associated with increased reactive oxygen species generation, glutathione depletion, changes in mitochondrial transmembrane potential, simultaneous downregulation of mitofilin and carbonylation of specific proteins: glucose-regulated protein-78, heat-shock protein 60, heat-shock protein cognate 71, phosphate disulphide isomerase, calreticulin, beta-actin, tubulin-alpha-1-chain and enolase-alpha. Interestingly, all carbonylated proteins except calreticulin and enolase-alpha showed a pI shift in the proteome maps. Our results suggest that PDT with Pu-18 perturbs the normal redox balance and shifts HL60 cells into a state of oxidative stress, which systematically induces the carbonylation of specific chaperones. As these proteins normally produce a prosurvival signal during oxidative stress, we hypothesize that their carbonylation represents a signalling mechanism for apoptosis induced by PDT.


Subject(s)
Apoptosis/physiology , Oxidative Stress/physiology , Photochemotherapy , Porphyrins/pharmacology , Reactive Oxygen Species/metabolism , Actins/metabolism , Apoptosis/drug effects , Biomarkers, Tumor , Calreticulin/metabolism , Caspases/metabolism , DNA-Binding Proteins/metabolism , Electrophoresis, Gel, Two-Dimensional , Flow Cytometry , Heat-Shock Proteins/metabolism , Humans , Oxidation-Reduction , Oxidative Stress/drug effects , Phosphopyruvate Hydratase/metabolism , Proteomics , Tumor Suppressor Proteins/metabolism
15.
Braz J Biol ; 65(1): 51-60, 2005 Feb.
Article in English | MEDLINE | ID: mdl-16025903

ABSTRACT

Decomposition of aquatic plants is influenced by several biotic and abiotic factors. Among them, temperature plays an important role. Despite the increasing number of studies describing the effects of temperature on the decomposition of aquatic macrophytes, little attention has been given to the decay of submerged macrophytes. In this paper, we assessed the effect of temperature on weight loss and chemical composition of detritus of the submerged aquatic macrophyte Egeria najas Planchon (Hydrocharitaceae). Fresh plant material was maintained at 17 degrees C and 27 degrees C, in the dark, in incubation chambers. The overall decay process was best described by a linear model, with rates of 0.014 day(-1) (R2= 94%) and 0.045 day(-1) (R2= 96%) obtained at 17 degrees C and 27 degrees C, respectively. The analysis of covariance (ANCOVA) indicated a significant difference between the decomposition rates at the two temperatures. The rapid breakdown of E. najas detritus, indicated by the decay coefficient, may be explained by its low content of resistant compounds such as cellulose and lignin. The variables analyzed in this study (pH, electrical conductivity, dissolved oxygen in the water and organic matter, total nitrogen and total phosphorus concentration in detritus) showed accentuated responses at 27 degrees C. It is likely that the higher temperature increased microbial activity and, therefore, oxygen consumption in the water, consequently affecting the pH and the rate of ion and nutrient liberation into the aquatic ecosystem. Due to the rapid decomposition of E. najas at high temperatures, a small exportation is expected of this species from its stands to distant regions in tropical reservoirs, where it is considered a potential nuisance species.


Subject(s)
Hydrocharitaceae , Temperature , Fresh Water
16.
Braz J Biol ; 65(3): 439-49, 2005 Aug.
Article in English | MEDLINE | ID: mdl-16341422

ABSTRACT

In this study, patterns of spatial synchrony in population fluctuations (cross-correlation) of an endemic fish assemblage of a Neotropical reservoir (Segredo Reservoir, Iguaçu River, Paraná State, Brazil) were reported. First, the level of population synchrony for 20 species was estimated. Second, population synchrony was correlated, using the Mantel test, with geographical distances among sites (n = 11) and also environmental synchrony (temperature). Nine species presented significant correlations between spatial synchrony and geographic distances (Astyanax sp. b, Astyanax sp. c, Pimelodus sp., Hoplias malabaricus, Crenicichla iguassuensis, Hypostomus derbyi, Hypostomus myersi, Rhamdia branneri, and R. voulezi). Considering the ecology of the species and the significant relationship between population and environmental synchronies, it seems that environmental stochasticity is the most plausible hypothesis in explaining the observed synchrony patterns.


Subject(s)
Fishes/physiology , Rivers , Temperature , Animals , Brazil , Fishes/classification , Population Density
17.
Braz J Biol ; 65(1): 19-24, 2005 Feb.
Article in English | MEDLINE | ID: mdl-16025899

ABSTRACT

The relationship between the aquatic macrophyte cover in upper segments of tributaries and this cover in these tributaries but near the reservoir's main body was tested. Sixteen taxa belonging to 12 families of aquatic macrophytes were recorded in Cachoeira Dourada Reservoir. The most frequent species were Eichhornia azurea (frequency of occurrence=92%; n=37 sites) and E. crassipes (44%). Upper segments of the tributaries were the main areas colonized by these aquatic macrophytes. The positive relationship between the aquatic macrophyte cover between the upper and lower segments of tributaries indicates the importance of dispersion in the colonization of the arms and the reservoir's main body.


Subject(s)
Fresh Water , Plants/classification , Biomass , Brazil
18.
Braz J Biol ; 65(2): 251-61, 2005 May.
Article in English | MEDLINE | ID: mdl-16097727

ABSTRACT

Spatial patterns in biodiversity variation at a regional scale are rarely taken into account when a natural reserve is to be established, despite many available methods for determining them. In this paper, we used dimensions of occurrence of 105 species of Anura (Amphibia) in the cerrado region of central Brazil to create a regional system of potential areas that preserves all regional diversity, using three different algorithms to establish reserve networks: "greedy", rarity, and simulated annealing algorithms. These generated networks based on complementarity with 10, 12, and 8 regions, respectively, widely distributed in the biome, and encompassing various Brazilian states. Although the purpose of these algorithms is to find a small number of regions for which all species are represented at least once, the results showed that 67.6%, 76.2%, and 69.5% of the species were represented in two or more regions in the three networks. Simulated annealing produced the smallest network, but it left out three species (one endemic). On the other hand, while the greedy algorithm produce a smaller solution, the rarity-based algorithm ensured that more species were represented more than once, which can be advantageous because it takes into consideration the high levels of habitat loss in the cerrado. Although usually coarse, these macro-scale approaches can provide overall guidelines for conservation and are useful in determining the focus for more local and effective conservation efforts, which is especially important when dealing with a taxonomic group such as anurans, for which quick and drastic population declines have been reported throughout the world.


Subject(s)
Algorithms , Anura , Biodiversity , Animals , Brazil , Conservation of Natural Resources , Population Dynamics
19.
J Proteomics ; 128: 375-87, 2015 Oct 14.
Article in English | MEDLINE | ID: mdl-26342673

ABSTRACT

Pulmonary sarcoidosis (Sar) is an idiopathic disease histologically typified by non-caseating epitheliod cell sarcoid granulomas. A cohort of 37 Sar patients with chronic persistent pulmonary disease was described in this study. BAL protein profiles from 9 of these Sar patients were compared with those from 8 smoker (SC) and 10 no-smoker controls (NSC) by proteomic approach. Principal Component Analysis was performed to clusterize the samples in the corresponding conditions highlighting a differential pattern profiles primarily in Sar than SC. Spot identification reveals thirty-four unique proteins involved in lipid, mineral, and vitamin Dmetabolism, and immuneregulation of macrophage function. Enrichment analysis has been elaborated by MetaCore, revealing 14-3-3ε, α1-antitrypsin, GSTP1, and ApoA1 as "central hubs". Process Network as well as Pathway Maps underline proteins involved in immune response and inflammation induced by complement system, innate inflammatory response and IL-6signalling. Disease Biomarker Network highlights Tuberculosis and COPD as pathologies that share biomarkers with sarcoidosis. In conclusion, Sar protein expression profile seems more similar to that of NSC than SC, conversely to other ILDs. Moreover, Disease Biomarker Network revealed several common features between Sar and TB, exhorting to orientate the future proteomics investigations also in comparative BALF analysis of Sar and TB.


Subject(s)
Proteome/metabolism , Proteomics/methods , Sarcoidosis, Pulmonary/diagnosis , Sarcoidosis, Pulmonary/metabolism , Smoking/metabolism , Tuberculosis/metabolism , Bronchoalveolar Lavage Fluid , Female , Humans , Male , Middle Aged , Reproducibility of Results , Sarcoidosis, Pulmonary/complications , Sensitivity and Specificity , Signal Transduction
20.
Am J Cardiol ; 87(12): 1346-50, 2001 Jun 15.
Article in English | MEDLINE | ID: mdl-11397351

ABSTRACT

This study aimed to assess whether contractile reserve evaluation using dobutamine gated single-photon emission computed tomography (SPECT) improves the capability of quantitative perfusion analysis to predict functional recovery of viable hibernating myocardium. Resting and dobutamine nitrate-enhanced technetium-99m sestamibi (sestamibi) gated SPECT studies were performed in patients with coronary artery disease who had left ventricular dysfunction. Tracer activity was quantified, and wall motion and thickening visually scored. Reversible dysfunction was identified with gated SPECT repeated after coronary revascularization. Using the best activity threshold, perfusion quantification achieved 85% sensitivity and 55% specificity. Contractile reserve detection was significantly less sensitive (64%, p <0.0005), but more specific (88%, p <0.00001) than perfusion quantification. However, in the subgroup of hypokinetic segments, the sensitivity of contractile reserve assessment was just slightly lower than perfusion quantification (72% vs 91%, p = NS), whereas specificity was significantly higher (94% vs 23%, p <0.00001). Conversely, in the adyskinetic segments, perfusion quantification was significantly more sensitive than contractile reserve (82% vs 59%, p <0.005), but similarly specific (76% vs 85%, p = NS). Therefore, the identification of reversible dysfunction based on perfusion quantification in adyskinetic segments and on contractile reserve detection in hypokinetic segments was significantly more specific (83% vs 55%, p <0.00001) than standard quantitative perfusion SPECT, without major loss in sensitivity (78% vs 85%, p = NS). In conclusion, contractile reserve evaluation using dobutamine gated SPECT enhances the reliability of nitrate-enhanced sestamibi SPECT when used to predict reversible dysfunction in hypokinetic segments, whereas perfusion quantification remains superior in adyskinetic segments.


Subject(s)
Coronary Circulation/physiology , Coronary Disease/diagnostic imaging , Dobutamine , Exercise Test , Myocardial Contraction/physiology , Myocardial Infarction/diagnostic imaging , Tomography, Emission-Computed, Single-Photon , Ventricular Dysfunction, Left/diagnostic imaging , Aged , Coronary Disease/physiopathology , Female , Humans , Male , Middle Aged , Myocardial Infarction/physiopathology , Myocardial Stunning/diagnostic imaging , Myocardial Stunning/physiopathology , Predictive Value of Tests , Prognosis , Technetium Tc 99m Sestamibi , Ventricular Dysfunction, Left/physiopathology
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