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1.
Synthesis of phylogeny and taxonomy into a comprehensive tree of life.
Proc Natl Acad Sci U S A
; 112(41): 12764-9, 2015 Oct 13.
Article
in English
| MEDLINE | ID: mdl-26385966
2.
MulRF: a software package for phylogenetic analysis using multi-copy gene trees.
Bioinformatics
; 31(3): 432-3, 2015 Feb 01.
Article
in English
| MEDLINE | ID: mdl-25273112
3.
Assessing approaches for inferring species trees from multi-copy genes.
Syst Biol
; 64(2): 325-39, 2015 Mar.
Article
in English
| MEDLINE | ID: mdl-25540456
4.
South Asian medical cohorts reveal strong founder effects and high rates of homozygosity.
Nat Commun
; 14(1): 3377, 2023 06 08.
Article
in English
| MEDLINE | ID: mdl-37291107
5.
Efficient error correction algorithms for gene tree reconciliation based on duplication, duplication and loss, and deep coalescence.
BMC Bioinformatics
; 13 Suppl 10: S11, 2012 Jun 25.
Article
in English
| MEDLINE | ID: mdl-22759416
6.
Genome-Wide Polygenic Score Predicts Large Number of High Risk Individuals in Monogenic Undiagnosed Young Onset Parkinson's Disease Patients from India.
Adv Biol (Weinh)
; 6(11): e2101326, 2022 11.
Article
in English
| MEDLINE | ID: mdl-35810474
7.
Role of Phosphorylation and Hyperphosphorylation of Tau in Its Interaction with ßα Dimeric Tubulin Studied from a Bioinformatics Perspective.
Avicenna J Med Biotechnol
; 13(1): 24-34, 2021.
Article
in English
| MEDLINE | ID: mdl-33680370
8.
Validation of a Targeted Next-Generation Sequencing Panel for Tumor Mutation Burden Analysis: Results from the Onconetwork Immuno-Oncology Consortium.
J Mol Diagn
; 23(7): 882-893, 2021 07.
Article
in English
| MEDLINE | ID: mdl-33964449
9.
iGTP: a software package for large-scale gene tree parsimony analysis.
BMC Bioinformatics
; 11: 574, 2010 Nov 23.
Article
in English
| MEDLINE | ID: mdl-21092314
10.
Establishing guidelines to harmonize tumor mutational burden (TMB): in silico assessment of variation in TMB quantification across diagnostic platforms: phase I of the Friends of Cancer Research TMB Harmonization Project.
J Immunother Cancer
; 8(1)2020 03.
Article
in English
| MEDLINE | ID: mdl-32217756
11.
A scalable solution for tumor mutational burden from formalin-fixed, paraffin-embedded samples using the Oncomine Tumor Mutation Load Assay.
Transl Lung Cancer Res
; 7(6): 616-630, 2018 Dec.
Article
in English
| MEDLINE | ID: mdl-30505706
12.
Inferring species trees from incongruent multi-copy gene trees using the Robinson-Foulds distance.
Algorithms Mol Biol
; 8(1): 28, 2013 Nov 01.
Article
in English
| MEDLINE | ID: mdl-24180377
13.
Fast local search for unrooted Robinson-Foulds supertrees.
IEEE/ACM Trans Comput Biol Bioinform
; 9(4): 1004-13, 2012.
Article
in English
| MEDLINE | ID: mdl-22431553
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